Package: DominoEffect
Type: Package
Title: Identification and Annotation of Protein Hotspot Residues
Version: 1.29.0
Author: Marija Buljan and Peter Blattmann
Maintainer: Marija Buljan <[email protected]>, 
    Peter Blattmann <[email protected]>
Description: The functions support identification and annotation of hotspot 
    residues in proteins. These are individual amino acids that accumulate 
    mutations at a much higher rate than their surrounding regions.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Depends: R(>= 3.5)
Imports: biomaRt, data.table, utils, stats, Biostrings, pwalign,
    SummarizedExperiment, VariantAnnotation, AnnotationDbi, GenomeInfoDb,
    IRanges, GenomicRanges, methods
Suggests: knitr, testthat, rmarkdown
RoxygenNote: 6.0.1
VignetteBuilder: knitr
biocViews: Software, SomaticMutation, Proteomics, SequenceMatching, Alignment
NeedsCompilation: no