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lauzingaretti authored on 16/10/2019 14:39:59 • GitHub committed on 16/10/2019 14:39:59
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+% Generated by roxygen2: do not edit by hand
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+% Please edit documentation in R/DistStatis-Class.R
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+\docType{methods}
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+\name{Inertia_comp}
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+\alias{Inertia_comp}
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+\alias{Inertia_comp,DistStatis-method}
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+\title{Inertia_comp}
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+\usage{
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+\S4method{Inertia_comp}{DistStatis}(x)
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+}
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+\arguments{
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+\item{x}{an object from DistSatis class.}
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+}
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+\value{
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+Inertia_comp explained inertia for Compromise matrix from LinkData object
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+}
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+\description{
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+Accessor to explained inertia of compromise axis from LinkData output.
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+}
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+\examples{
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+{
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+data(Taraoceans)
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+pro.phylo <- Taraoceans$taxonomy[ ,'Phylum']
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+TaraOc<-list(Taraoceans$phychem,as.data.frame(Taraoceans$pro.phylo)
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+,as.data.frame(Taraoceans$pro.NOGs))
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+TaraOc_1<-scale(TaraOc[[1]])
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+Normalization<-lapply(list(TaraOc[[2]],TaraOc[[3]]),
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+function(x){DataProcessing(x,Method='Compositional')})
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+colnames(Normalization[[1]])=pro.phylo
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+colnames(Normalization[[2]])=Taraoceans$GO
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+TaraOc<-list(TaraOc_1,Normalization[[1]],Normalization[[2]])
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+names(TaraOc)<-c('phychem','pro_phylo','pro_NOGs')
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+TaraOc<-lapply(TaraOc,as.data.frame)
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+Output<-LinkData(TaraOc,Scale =FALSE,Distance = c('ScalarProduct','Euclidean','Euclidean'))
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+Inertia_comp(Output)
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+}
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+}