git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MAIT@95035 bc3139a8-67e5-0310-9ffc-ced21a209358
Marc Carlson authored on 06/10/2014 23:58:52
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+\name{posAdducts}
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+\alias{posAdducts}
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+\title{Positive adducts table}
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+\description{
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+This table contains the adducts to be looked up for when the LC/MS polarisation mode was set to positive. The layout of the table is that of the \code{CAMERA} adduct table.
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+} |
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+\value{
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+A table having the fields: |
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+\itemize{
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+\item{
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+ID: An ID number |
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+} |
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+\item{
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+name: The adduct name |
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+} |
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+\item{
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+nmol: Number of fragments in the adduct |
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+} |
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+\item{
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+charge: Electric charge of the adduct |
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+} |
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+\item{
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+massdiff: Mass difference in the fragment caused by the adduct |
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+} |
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+\item{
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+oidscore: Numeric relating the related clusters of ions |
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+} |
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+\item{
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+quasi: Binary value showing the validness of the annotation group |
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+} |
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+\item{
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+ips: Four values are possible (0.25,0.5,0.75,1) depending on the likelihood of the rule |
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+} |
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+ |
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+} |
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+} |
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+\seealso{
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+ \code{\link{peakAnnotation}}}
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+ |
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+\author{Francesc Fernandez,
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+ \email{[email protected]}}
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+\keyword{file}
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