Package: TENxIO
Type: Package
Title: Import methods for 10X Genomics files
Version: 0.11.0
Authors@R:
  person(
    "Marcel", "Ramos", , "[email protected]",
    c("aut", "cre"), c(ORCID = "0000-0002-3242-0582")
  )
Depends: R (>= 4.2.0), SingleCellExperiment, SummarizedExperiment
Imports:
  BiocBaseUtils,
  BiocGenerics,
  BiocIO,
  GenomeInfoDb,
  GenomicRanges,
  Matrix,
  MatrixGenerics,
  methods,
  RCurl,
  readr,
  S4Vectors,
  utils
Suggests:
  BiocStyle,
  ExperimentHub,
  HDF5Array,
  knitr,
  RaggedExperiment,
  rhdf5,
  rmarkdown,
  Rsamtools
Description: The package exports methods for working with version 2 and 3 of
    10X Genomics files. It simplifies importing by creating a class with
    slots for version and group in the H5 file. Currently only H5 files are
    supported.
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1
BugReports: https://github.com/waldronlab/TENxIO/issues
URL: https://github.com/waldronlab/TENxIO
Collate: 
    'TENxFile-class.R'
    'TENxFileList-class.R'
    'TENxFragments-class.R'
    'TENxH5-class.R'
    'TENxIO-package.R'
    'TENxMTX-class.R'
    'TENxPeaks-class.R'
    'utils.R'