% Generated by roxygen2: do not edit by hand % Please edit documentation in R/TENxFragments-class.R \name{TENxFragments} \alias{TENxFragments} \title{TENxFragments: Import fragments files from 10X} \usage{ TENxFragments(resource, yieldSize = 200, which = GRanges(), ...) } \arguments{ \item{resource}{character(1) The file path to the fragments resource, usually a compressed tabix file with extension \code{.tsv.gz}.} \item{yieldSize}{numeric() The number of records to read by default, 200 records will be imported. A warning will be emitted if not modified.} \item{which}{GRanges() A GRanges indicating the regions of interest. This get sent to \code{RSamtools} as the \code{param} input.} \item{...}{Further arguments to the class generator function (currently not used)} } \value{ A \code{RaggedExperiment} object class } \description{ TENxFragments: Import fragments files from 10X } \examples{ fr <- system.file( "extdata", "pbmc_3k_atac_ex_fragments.tsv.gz", package = "TENxIO", mustWork = TRUE ) tfr <- TENxFragments(fr) fra <- import(tfr) }