Name Mode Size
..
MA0001.1.pfm 100644 0 kb
crp0.s 100644 2 kb
hg19.danRer7.net.axt 100644 129 kb
meme.output 100644 33 kb
pfm_all_example.txt 100644 1 kb
tffm_detailed.xml 100644 32 kb
tffm_first_order.xml 100644 7 kb
README.md
# TFBSTools Software Package for Transcription Factor Binding Site (TFBS) Analysis ## Installation of the stable version of `TFBSTools` from Bioconductor ```R if (!requireNamespace("BiocManager", quietly=TRUE)) install.packages("BiocManager") BiocManager::install("TFBSTools") ``` ## Installation of the development version of `TFBSTools` from github **Prerequsite**: * Mac: Install "Command Line Tools" via `gcc` on terminal * Linux: Install a compiler and various development libraries (details vary across different flavors of Linux). * Windows: Install [Rtools](https://cran.r-project.org/bin/windows/Rtools/). ```R devtools::install_github("ge11232002/TFBSTools") ```