Package: arrayQualityMetrics
Title: Quality metrics report for microarray data sets
Version: 3.34.0
Author: Audrey Kauffmann, Wolfgang Huber
Maintainer: Mike Smith <[email protected]>
BugReports: https://github.com/grimbough/arrayQualityMetrics/issues
VignetteBuilder: knitr
Depends:
Suggests: ALLMLL, CCl4, BiocStyle, knitr
Imports: affy, affyPLM (>= 1.27.3), beadarray, Biobase, Cairo (>= 1.4-6), genefilter,
         graphics, grDevices, grid, gridSVG (>= 1.4-3), Hmisc, hwriter, lattice, latticeExtra,
         limma, methods, RColorBrewer, setRNG, stats,
         utils, vsn (>= 3.23.3), XML
Description: This package generates microarray quality metrics reports for
  data in Bioconductor microarray data containers (ExpressionSet, NChannelSet,
  AffyBatch). One and two color array platforms are supported.
License: LGPL (>= 2)
biocViews: Microarray, QualityControl, OneChannel, TwoChannel, ReportWriting
Collate: classes.R affyspecific.r annotateSvg.R arrayQualityMetrics.r
  boxplot.r density.r globalParameters.R heatmap.r makeColors.R maplot.r meansd.r
  outlier.R pca.r prepdata.r probesmap.r spatial.r writereport.r XYfromGAL.r