| 9e523932 |
# Generated by roxygen2: do not edit by hand
|
| 8ffa4e3e |
export(allSamples)
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| 894a3533 |
export(cBioCache)
|
| 55439783 |
export(cBioDataPack)
|
| 76d0e924 |
export(cBioPortal)
|
| 4f477778 |
export(cBioPortalData)
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| 3c552b4c |
export(clinicalData)
|
| 95139a58 |
export(copyNumberData)
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| 2cf63f89 |
export(downloadStudy)
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| a6cf90ac |
export(fetchData)
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| 8ffa4e3e |
export(genePanelMolecular)
export(genePanels)
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| 82cd170a |
export(geneTable)
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| 46a8651d |
export(getDataByGenes)
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| 8ffa4e3e |
export(getGenePanel)
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| ed4a5186 |
export(getGenePanelMolecular)
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| 8ffa4e3e |
export(getSampleInfo)
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| 3c552b4c |
export(getStudies)
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| 0fa9897d |
export(loadStudy)
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| 51991bcc |
export(molecularData)
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| 3c552b4c |
export(molecularProfiles)
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| 403d0722 |
export(mutationData)
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| 2bc6343c |
export(queryGeneTable)
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| 8af4ff8e |
export(removeDataCache)
export(removePackCache)
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| 82cd170a |
export(sampleLists)
export(samplesInSampleLists)
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| 8ffa4e3e |
export(searchOps)
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| bb6736fa |
export(setCache)
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| 0fa9897d |
export(untarStudy)
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| 8ffa4e3e |
exportClasses(cBioPortal)
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| 41d46293 |
exportMethods(operations)
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| 8dc69569 |
import(RTCGAToolbox)
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| 3c552b4c |
importFrom(AnVIL,Service)
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| 41d46293 |
importFrom(AnVIL,operations)
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| 15f06163 |
importFrom(BiocBaseUtils,checkInstalled)
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| fc42cb10 |
importFrom(BiocBaseUtils,lifeCycle)
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| 4fcbde98 |
importFrom(BiocFileCache,BiocFileCache)
importFrom(BiocFileCache,bfcadd)
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| 9152f4f8 |
importFrom(BiocFileCache,bfccache)
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| 4fcbde98 |
importFrom(BiocFileCache,bfcdownload)
|
| 8af4ff8e |
importFrom(BiocFileCache,bfcinfo)
importFrom(BiocFileCache,bfcnew)
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| 4fcbde98 |
importFrom(BiocFileCache,bfcquery)
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| 2ad63e16 |
importFrom(BiocFileCache,bfcremove)
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| 4fcbde98 |
importFrom(BiocFileCache,bfcrpath)
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| cfbc772a |
importFrom(BiocFileCache,bfcupdate)
importFrom(GenomeInfoDb,"genome<-")
importFrom(GenomeInfoDb,genome)
importFrom(GenomicRanges,makeGRangesListFromDataFrame)
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| eae10aab |
importFrom(MultiAssayExperiment,ExperimentList)
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| 8dc69569 |
importFrom(MultiAssayExperiment,MultiAssayExperiment)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,DataFrame)
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| 3a5e3d0b |
importFrom(S4Vectors,SimpleList)
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| 9e523932 |
importFrom(S4Vectors,isSingleString)
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| 767502da |
importFrom(S4Vectors,metadata)
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| 37a60447 |
importFrom(SummarizedExperiment,"rowData<-")
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| 3a5e3d0b |
importFrom(SummarizedExperiment,SummarizedExperiment)
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| cfbc772a |
importFrom(SummarizedExperiment,rowData)
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| 8dc69569 |
importFrom(TCGAutils,TCGAbarcode)
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| 69eba5b5 |
importFrom(TCGAutils,findGRangesCols)
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| 8dc69569 |
importFrom(TCGAutils,generateMap)
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| cfbc772a |
importFrom(methods,as)
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| 8a7aa2d6 |
importFrom(methods,callNextMethod)
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| cfbc772a |
importFrom(methods,is)
|
| 68e6870c |
importFrom(methods,new)
|
| 767502da |
importFrom(readr,read_tsv)
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| 8dc69569 |
importFrom(readr,type_convert)
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| cfbc772a |
importFrom(stats,na.omit)
|
| 8af4ff8e |
importFrom(stats,setNames)
|
| cfbc772a |
importFrom(utils,data)
importFrom(utils,download.file)
importFrom(utils,untar)
|
