# Generated by roxygen2: do not edit by hand export(bio_cache) export(downloadStudy) export(loadStudy) export(removeCache) export(setCache) import(RTCGAToolbox) importFrom(BiocFileCache,BiocFileCache) importFrom(BiocFileCache,bfcadd) importFrom(BiocFileCache,bfccache) importFrom(BiocFileCache,bfcdownload) importFrom(BiocFileCache,bfcneedsupdate) importFrom(BiocFileCache,bfcquery) importFrom(BiocFileCache,bfcremove) importFrom(BiocFileCache,bfcrpath) importFrom(BiocFileCache,bfcupdate) importFrom(GenomeInfoDb,"genome<-") importFrom(GenomeInfoDb,genome) importFrom(GenomicRanges,makeGRangesListFromDataFrame) importFrom(MultiAssayExperiment,ExperimentList) importFrom(MultiAssayExperiment,MultiAssayExperiment) importFrom(S4Vectors,"metadata<-") importFrom(S4Vectors,DataFrame) importFrom(S4Vectors,SimpleList) importFrom(S4Vectors,isSingleString) importFrom(S4Vectors,metadata) importFrom(SummarizedExperiment,SummarizedExperiment) importFrom(SummarizedExperiment,rowData) importFrom(TCGAutils,TCGAbarcode) importFrom(TCGAutils,findGRangesCols) importFrom(TCGAutils,generateMap) importFrom(methods,as) importFrom(methods,is) importFrom(readr,read_tsv) importFrom(readr,type_convert) importFrom(stats,na.omit) importFrom(utils,data) importFrom(utils,download.file) importFrom(utils,untar)