1. easylift
  2. DESCRIPTION
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_21 branch

A Wokaty authored on 15/04/2025 17:20:46
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DESCRIPTION
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.6.0
3 
+Version: 1.7.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_21 branch

A Wokaty authored on 15/04/2025 17:20:46
Showing 1 changed files
DESCRIPTION
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.5.0
3 
+Version: 1.6.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_20 branch

J Wokaty authored on 29/10/2024 15:23:33
Showing 1 changed files
DESCRIPTION
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1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.4.0
3 
+Version: 1.5.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_20 branch

J Wokaty authored on 29/10/2024 15:23:33
Showing 1 changed files
DESCRIPTION
History View file @ 1610fdf
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.3.0
3 
+Version: 1.4.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_19 branch

J Wokaty authored on 30/04/2024 15:51:24
Showing 1 changed files
DESCRIPTION
History View file @ cdb26da
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.2.0
3 
+Version: 1.3.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_19 branch

J Wokaty authored on 30/04/2024 15:51:24
Showing 1 changed files
DESCRIPTION
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.1.0
3 
+Version: 1.2.0
4 4 
 Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: prepare for release

nahid18 authored on 24/10/2023 16:32:36
Showing 1 changed files
DESCRIPTION
History View file @ 9005cb1
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@@ -1,7 +1,7 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 3 
 Version: 1.1.0
4 
-Date: 2023-10-12
4 
+Date: 2023-10-24
5 5 
 Authors@R:
6 6 
     c(
7 7 
     person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_18 branch

J Wokaty authored on 24/10/2023 15:51:06
Showing 1 changed files
DESCRIPTION
History View file @ 1489b54
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.0.0
3 
+Version: 1.1.0
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_18 branch

J Wokaty authored on 24/10/2023 15:51:06
Showing 1 changed files
DESCRIPTION
History View file @ b6dc83e
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.99
3 
+Version: 1.0.0
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fix tests

nahid18 authored on 12/10/2023 20:06:39
Showing 1 changed files
DESCRIPTION
History View file @ 5517d5b
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.1.0
3 
+Version: 0.99.99
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fix tests

nahid18 authored on 12/10/2023 20:02:51
Showing 1 changed files
DESCRIPTION
History View file @ 35b0aae
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 1.0.0
3 
+Version: 1.1.0
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fix tests

nahid18 authored on 12/10/2023 20:00:27
Showing 1 changed files
DESCRIPTION
History View file @ 679b734
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.99
3 
+Version: 1.0.0
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fix tests

nahid18 authored on 12/10/2023 09:12:25
Showing 1 changed files
DESCRIPTION
History View file @ 985aadf
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.98
3 
+Version: 0.99.99
4 4 
 Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fix tests

nahid18 authored on 12/10/2023 08:51:53
Showing 1 changed files
DESCRIPTION
History View file @ 840c8d1
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@@ -1,7 +1,7 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.97
4 
-Date: 2023-09-25
3 
+Version: 0.99.98
4 
+Date: 2023-10-12
5 5 
 Authors@R:
6 6 
     c(
7 7 
     person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
Browse code

feat: fixes

nahid18 authored on 29/09/2023 02:29:13
Showing 1 changed files
DESCRIPTION
History View file @ cec1165
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.96
3 
+Version: 0.99.97
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
... ... 
@@ -8,9 +8,10 @@ Authors@R:
8 8 
     person("Hervé", "Pagès", role = c("aut", "rev")),
9 9 
     person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
10 10 
     )
11 
-Description: The package performs genomic liftover between different genome assemblies given GRanges object, target genome and chain file. If the chain file is cached with BiocFileCache, the chain file argument can be omitted.
11 
+Description: The easylift package provides a convenient tool for genomic liftover operations between different genome assemblies. It seamlessly works with Bioconductor's GRanges objects and chain files from the UCSC Genome Browser, allowing for straightforward handling of genomic ranges across various genome versions. One noteworthy feature of easylift is its integration with the BiocFileCache package. This integration automates the management and caching of chain files necessary for liftover operations. Users no longer need to manually specify chain file paths in their function calls, reducing the complexity of the liftover process.
12 12 
 License: MIT + file LICENSE
13 13 
 URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift
14 
+BugReports: https://github.com/nahid18/easylift/issues
14 15 
 Encoding: UTF-8
15 16 
 Roxygen: list(markdown = TRUE)
16 17 
 RoxygenNote: 7.2.3
... ... 
@@ -21,7 +22,8 @@ Imports:
21 22 
     rtracklayer,
22 23 
     GenomeInfoDb,
23 24 
     R.utils,
24 
-    tools
25 
+    tools,
26 
+    methods
25 27 
 Suggests:
26 28 
     testthat (>= 3.0.0),
27 29 
     IRanges,
... ... 
@@ -30,4 +32,4 @@ Suggests:
30 32 
     rmarkdown
31 33 
 Config/testthat/edition: 3
32 34 
 VignetteBuilder: knitr
33 
-biocViews: Workflow, BasicWorkflow
35 
+biocViews: Software, WorkflowStep, Sequencing, Coverage, GenomeAssembly, DataImport
Browse code

feat: update vignette

nahid18 authored on 28/09/2023 08:26:12
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DESCRIPTION
History View file @ d83143d
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.95
3 
+Version: 0.99.96
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: update authors

nahid18 authored on 28/09/2023 08:17:06
Showing 1 changed files
DESCRIPTION
History View file @ 54efd72
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.94
3 
+Version: 0.99.95
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

merge

mikelove authored on 28/09/2023 01:04:00
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Browse code

add Herve to author list

mikelove authored on 28/09/2023 01:03:33
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DESCRIPTION
History View file @ f8e45b5
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@@ -1,10 +1,11 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.8
3 
+Version: 0.99.9
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
7 
-    person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
7 
+    person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
8 
+    person("Hervé", "Pagès", role = c("aut", "rev")),
8 9 
     person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
9 10 
     )
10 11 
 Description: The package performs genomic liftover between different genome assemblies given GRanges object, target genome and chain file. If the chain file is cached with BiocFileCache, the chain file argument can be omitted.
Browse code

feat: unit tests

nahid18 authored on 27/09/2023 22:01:58
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DESCRIPTION
History View file @ 12b8611
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.92
3 
+Version: 0.99.93
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: sanity checks

nahid18 authored on 27/09/2023 20:16:24
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DESCRIPTION
History View file @ dbb5644
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.91
3 
+Version: 0.99.92
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: additional tests

nahid18 authored on 26/09/2023 09:37:18
Showing 1 changed files
DESCRIPTION
History View file @ f79a393
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.9
3 
+Version: 0.99.91
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: further improvements

nahid18 authored on 26/09/2023 03:14:17
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DESCRIPTION
History View file @ e4091e2
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@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.8
3 
+Version: 0.99.9
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

add bfc argument, use temp location for testing

mikelove authored on 26/09/2023 00:32:50
Showing 1 changed files
DESCRIPTION
History View file @ 5aaae8d
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.7
3 
+Version: 0.99.8
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: readme update

nahid18 authored on 25/09/2023 21:38:52
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DESCRIPTION
History View file @ 7b558a0
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.6
3 
+Version: 0.99.7
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: fixes

nahid18 authored on 25/09/2023 21:22:37
Showing 1 changed files
DESCRIPTION
History View file @ aa2acc5
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.5
3 
+Version: 0.99.6
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
... ... 
@@ -14,13 +14,13 @@ Encoding: UTF-8
14 14 
 Roxygen: list(markdown = TRUE)
15 15 
 RoxygenNote: 7.2.3
16 16 
 Depends:
17 
-    GenomicRanges
17 
+    GenomicRanges,
18 
+    BiocFileCache
18 19 
 Imports:
19 20 
     rtracklayer,
20 21 
     GenomeInfoDb,
21 22 
     R.utils,
22 
-    tools,
23 
-    BiocFileCache
23 
+    tools
24 24 
 Suggests:
25 25 
     testthat (>= 3.0.0),
26 26 
     IRanges,
Browse code

feat: minor update

nahid18 authored on 25/09/2023 19:00:01
Showing 1 changed files
DESCRIPTION
History View file @ 8d1a9d4
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.4
3 
+Version: 0.99.5
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: updated test

nahid18 authored on 25/09/2023 15:36:16
Showing 1 changed files
DESCRIPTION
History View file @ 395f5ee
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.3
3 
+Version: 0.99.4
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

tweak help

mikelove authored on 25/09/2023 14:17:49
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DESCRIPTION
History View file @ a6de3cb
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.2
3 
+Version: 0.99.3
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: bfc fix

nahid18 authored on 24/09/2023 23:27:58
Showing 1 changed files
DESCRIPTION
History View file @ 418c410
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.1
3 
+Version: 0.99.2
4 4 
 Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: review changes

nahid18 authored on 24/09/2023 22:50:17
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DESCRIPTION
History View file @ eff4a9a
... ... 
@@ -1,18 +1,20 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.99.0
4 
-Date: 2023-08-05
3 
+Version: 0.99.1
4 
+Date: 2023-09-25
5 5 
 Authors@R:
6 6 
     c(
7 7 
     person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
8 8 
     person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
9 9 
     )
10 
-Description: The package performs genomic liftover different genome assemblies given GRanges, genome and chain file. If the chain file is cached with BiocFileCache, the chain file argument can be omitted.
10 
+Description: The package performs genomic liftover between different genome assemblies given GRanges object, target genome and chain file. If the chain file is cached with BiocFileCache, the chain file argument can be omitted.
11 11 
 License: MIT + file LICENSE
12 12 
 URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift
13 13 
 Encoding: UTF-8
14 14 
 Roxygen: list(markdown = TRUE)
15 15 
 RoxygenNote: 7.2.3
16 
+Depends:
17 
+    GenomicRanges
16 18 
 Imports:
17 19 
     rtracklayer,
18 20 
     GenomeInfoDb,
... ... 
@@ -21,7 +23,6 @@ Imports:
21 23 
     BiocFileCache
22 24 
 Suggests:
23 25 
     testthat (>= 3.0.0),
24 
-    GenomicRanges,
25 26 
     IRanges,
26 27 
     knitr,
27 28 
     BiocStyle,
Browse code

feat: bump version

nahid18 authored on 26/08/2023 19:12:21
Showing 1 changed files
DESCRIPTION
History View file @ e21781f
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.0.5
3 
+Version: 0.99.0
4 4 
 Date: 2023-08-05
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: minor updates

nahid18 authored on 26/08/2023 19:01:47
Showing 1 changed files
DESCRIPTION
History View file @ 6745d44
... ... 
@@ -1,13 +1,13 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.0.4
3 
+Version: 0.0.5
4 4 
 Date: 2023-08-05
5 5 
 Authors@R:
6 6 
     c(
7 7 
     person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
8 8 
     person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
9 9 
     )
10 
-Description: The package performs genomic liftover given genomicRanges and chain file.
10 
+Description: The package performs genomic liftover different genome assemblies given GRanges, genome and chain file. If the chain file is cached with BiocFileCache, the chain file argument can be omitted.
11 11 
 License: MIT + file LICENSE
12 12 
 URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift
13 13 
 Encoding: UTF-8
... ... 
@@ -28,3 +28,4 @@ Suggests:
28 28 
     rmarkdown
29 29 
 Config/testthat/edition: 3
30 30 
 VignetteBuilder: knitr
31 
+biocViews: Workflow, BasicWorkflow
Browse code

feat: minor update

nahid18 authored on 26/08/2023 17:09:40
Showing 1 changed files
DESCRIPTION
History View file @ 878fdf9
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftover
3 
-Version: 0.0.3
3 
+Version: 0.0.4
4 4 
 Date: 2023-08-05
5 5 
 Authors@R:
6 6 
     c(
Browse code

small change

mikelove authored on 25/08/2023 20:46:57
Showing 1 changed files
DESCRIPTION
History View file @ b6e545b
... ... 
@@ -1,6 +1,6 @@
1 1 
 Package: easylift
2 
-Title: An R package to perform genomic liftOver
3 
-Version: 0.0.2
2 
+Title: An R package to perform genomic liftover
3 
+Version: 0.0.3
4 4 
 Date: 2023-08-05
5 5 
 Authors@R:
6 6 
     c(
Browse code

feat: vignette

nahid18 authored on 25/08/2023 11:34:06
Showing 1 changed files
DESCRIPTION
History View file @ dfef1a9
... ... 
@@ -22,5 +22,9 @@ Imports:
22 22 
 Suggests:
23 23 
     testthat (>= 3.0.0),
24 24 
     GenomicRanges,
25 
-    IRanges
25 
+    IRanges,
26 
+    knitr,
27 
+    BiocStyle,
28 
+    rmarkdown
26 29 
 Config/testthat/edition: 3
30 
+VignetteBuilder: knitr
Browse code

feat: init tests

nahid18 authored on 25/08/2023 08:07:24
Showing 1 changed files
DESCRIPTION
History View file @ 9baff94
... ... 
@@ -19,3 +19,8 @@ Imports:
19 19 
     R.utils,
20 20 
     tools,
21 21 
     BiocFileCache
22 
+Suggests:
23 
+    testthat (>= 3.0.0),
24 
+    GenomicRanges,
25 
+    IRanges
26 
+Config/testthat/edition: 3
Browse code

adding BiocFileCache option

mikelove authored on 11/08/2023 19:56:33
Showing 1 changed files
DESCRIPTION
History View file @ e31a23c
... ... 
@@ -1,11 +1,11 @@
1 1 
 Package: easylift
2 2 
 Title: An R package to perform genomic liftOver
3 
-Version: 0.0.1
3 
+Version: 0.0.2
4 4 
 Date: 2023-08-05
5 5 
 Authors@R:
6 6 
     c(
7 7 
     person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
8 
-    person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
8 
+    person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
9 9 
     )
10 10 
 Description: The package performs genomic liftover given genomicRanges and chain file.
11 11 
 License: MIT + file LICENSE
... ... 
@@ -17,4 +17,5 @@ Imports:
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     rtracklayer,
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     GenomeInfoDb,
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     R.utils,
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-    tools
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+    tools,
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+    BiocFileCache
Browse code

feat: url update

nahid18 authored on 08/08/2023 15:53:22
Showing 1 changed files
DESCRIPTION
History View file @ 5227f1a
... ... 
@@ -9,7 +9,7 @@ Authors@R:
9 9 
     )
10 10 
 Description: The package performs genomic liftover given genomicRanges and chain file.
11 11 
 License: MIT + file LICENSE
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-URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift/
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+URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift
13 13 
 Encoding: UTF-8
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 Roxygen: list(markdown = TRUE)
15 15 
 RoxygenNote: 7.2.3
Browse code

feat: pkgdown

nahid18 authored on 08/08/2023 15:42:36
Showing 1 changed files
DESCRIPTION
History View file @ 42859ef
... ... 
@@ -9,7 +9,7 @@ Authors@R:
9 9 
     )
10 10 
 Description: The package performs genomic liftover given genomicRanges and chain file.
11 11 
 License: MIT + file LICENSE
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-URL: https://github.com/nahid18/easylift
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+URL: https://github.com/nahid18/easylift, https://nahid18.github.io/easylift/
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 Encoding: UTF-8
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 Roxygen: list(markdown = TRUE)
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 RoxygenNote: 7.2.3
Browse code

feat: update readme

nahid18 authored on 05/08/2023 05:06:04
Showing 1 changed files
DESCRIPTION
History View file @ 31c0481
... ... 
@@ -1,9 +1,11 @@
1 1 
 Package: easylift
2 
-Title: easylift: An R package to perform genomic liftOver
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+Title: An R package to perform genomic liftOver
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 Version: 0.0.1
4 
+Date: 2023-08-05
4 5 
 Authors@R:
5 6 
     c(
6 
-    person("Abdullah", "Al Nahid", , "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")), person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
7 
+    person("Abdullah", "Al Nahid", email= "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")),
8 
+    person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
7 9 
     )
8 10 
 Description: The package performs genomic liftover given genomicRanges and chain file.
9 11 
 License: MIT + file LICENSE
Browse code

feat: package build

nahid18 authored on 04/08/2023 18:07:37
Showing 1 changed files
DESCRIPTION
History View file @ 17868be
... ... 
@@ -3,13 +3,11 @@ Title: easylift: An R package to perform genomic liftOver
3 3 
 Version: 0.0.1
4 4 
 Authors@R:
5 5 
     c(
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-    person("Abdullah", "Al Nahid", , "[email protected]", role = c("aut", "cre"),
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-           comment = c(ORCID = "0000-0002-4390-0768"))
8 
-    person("Michael", "Love", email = "[email protected]",
9 
-    role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8401-0545"))
6 
+    person("Abdullah", "Al Nahid", , "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4390-0768")), person("Michael", "Love", email = "[email protected]", role = c("aut", "rev"), comment = c(ORCID = "0000-0001-8401-0545"))
10 7 
     )
11 8 
 Description: The package performs genomic liftover given genomicRanges and chain file.
12 9 
 License: MIT + file LICENSE
10 
+URL: https://github.com/nahid18/easylift
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 Encoding: UTF-8
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 Roxygen: list(markdown = TRUE)
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 RoxygenNote: 7.2.3
Browse code

feat: init package

nahid18 authored on 04/08/2023 17:34:45
Showing 1 changed files
DESCRIPTION
History View file @ 7d6fdd2
1 1 
new file mode 100644
... ... 
@@ -0,0 +1,20 @@
1 
+Package: easylift
2 
+Title: easylift: An R package to perform genomic liftOver
3 
+Version: 0.0.1
4 
+Authors@R:
5 
+    c(
6 
+    person("Abdullah", "Al Nahid", , "[email protected]", role = c("aut", "cre"),
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+           comment = c(ORCID = "0000-0002-4390-0768"))
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+    person("Michael", "Love", email = "[email protected]",
9 
+    role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8401-0545"))
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+    )
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+Description: The package performs genomic liftover given genomicRanges and chain file.
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+License: MIT + file LICENSE
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+Encoding: UTF-8
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+Roxygen: list(markdown = TRUE)
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+RoxygenNote: 7.2.3
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+Imports:
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+    rtracklayer,
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+    GenomeInfoDb,
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+    R.utils,
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+    tools