Name Mode Size
..
correlation.R 100755 5 kb
data.R 100755 1 kb
helpers.R 100755 7 kb
internalClusterboot.R 100755 46 kb
internalFunctions.R 100755 7 kb
metricsAnalysis.R 100755 33 kb
predictions.R 100755 8 kb
qualityIndices.R 100755 28 kb
stabilityIndex.R 100755 22 kb
README.md
![Version](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/version.svg) ![Release](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/latest_release_date.svg) ![Platforms](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/platforms.svg) ![License](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/license.svg) ![Downloads](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/downloads.svg) ![Conda](https://anaconda.org/bioconda/bioconductor-evaluomer/badges/installer/conda.svg) # evaluomeR The **evaluomeR** package permits to evaluate the reliability of bioinformatic metrics by analysing the stability and goodness of the classifications of such metrics. The method takes the measurements of the metrics for the dataset and evaluates the reliability of the metrics according to the following analyses: Correlations, Stability and Goodness of classifications. Preferably, install **evaluomeR** from the latest stable version at the [release bioconductor repository](https://www.bioconductor.org/packages/release/bioc/html/evaluomeR.html) or [development bioconductor repository](https://www.bioconductor.org/packages/devel/bioc/html/evaluomeR.html). # Installation You can install latest version or any release version with: ```bash devtools::install_github("neobernad/evaluomeR") # Latest commit devtools::install_github("neobernad/[email protected]") # Latest release ``` # Anaconda **evaluomeR** is also available in the Anaconda Cloud ([link](https://anaconda.org/bioconda/bioconductor-evaluomer)). You can install the package executing the following command: ```bash conda install -c bioconda bioconductor-evaluomer ``` # Documentation For further information check our [manual](https://www.bioconductor.org/packages/release/bioc/vignettes/evaluomeR/inst/doc/manual.html) or the [PDF version](https://www.bioconductor.org/packages/release/bioc/manuals/evaluomeR/man/evaluomeR.pdf).