Bioconductor Code: limma

Graph of limma

0f42428e0 (origin/RELEASE_3_21, RELEASE_3_21) limma 3.64.3 by Gordon Smyth <[email protected]> 2025-07-30 14:54:09 +1000;
6b06bd785 (HEAD -> devel, origin/devel, origin/HEAD) limma 3.65.3 by Gordon Smyth <[email protected]> 2025-07-30 14:48:01 +1000;
52065f89e limma 3.65.2 by Gordon Smyth <[email protected]> 2025-07-28 10:58:55 +1000;
2f25b3329 limma 3.64.1 by Gordon Smyth <[email protected]> 2025-05-21 19:54:16 +1000;
14d0e4322 limma 3.65.1 by Gordon Smyth <[email protected]> 2025-05-21 19:41:49 +1000;
7f412a0a5 limma 3.65.1 by Gordon Smyth <[email protected]> 2025-05-21 10:20:28 +1000;
00b461dfa Add Bioc 3.21 release and associated version bump to changelog.txt by Gordon Smyth <[email protected]> 2025-04-17 09:45:29 +1000;
8e04381dd bump x.y.z version to odd y following creation of RELEASE_3_21 branch by A Wokaty <[email protected]> 2025-04-15 09:16:33 -0400;
b67bfc645 bump x.y.z version to even y prior to creation of RELEASE_3_21 branch by A Wokaty <[email protected]> 2025-04-15 09:16:33 -0400;
bfdc8c8d8 limma 3.63.14 - update users guide by Gordon Smyth <[email protected]> 2025-04-15 09:10:35 +1000;
1d3c7bbdd limma 3.63.13 by Gordon Smyth <[email protected]> 2025-04-09 20:07:59 +1000;
35cf871ee limma 3.63.12 by Gordon Smyth <[email protected]> 2025-04-05 17:22:42 +1100;
28b157e9c limma 3.63.11 by Gordon Smyth <[email protected]> 2025-03-29 20:47:58 +1100;
80931c691 limma 3.63.10 by Gordon Smyth <[email protected]> 2025-03-19 19:05:08 +1100;
8f044335d limma 3.63.9 - New argument `legacy` for diffSplice.MArrayLM(). - Bug fix to diffSplice.MArrayLM() when fitFDistUnequalDF1() was called with `robust=TRUE`, i.e., whenever `robust=TRUE` and the number of transcripts differs between genes. by Gordon Smyth <[email protected]> 2025-03-11 21:02:49 +1100;
1e09977c2 limma 3.63.8 by Gordon Smyth <[email protected]> 2025-03-03 10:18:04 +1100;
1b9a99046 limma 3.63.7 by Gordon Smyth <[email protected]> 2025-03-02 22:46:13 +1100;
34b560da5 limma 3.63.6 by Gordon Smyth <[email protected]> 2025-03-02 17:36:54 +1100;
afdcf4a60 limma 3.63.5 by Gordon Smyth <[email protected]> 2025-02-24 18:55:31 +1100;
ea7c7b8cf limma 3.63.4 by Gordon Smyth <[email protected]> 2025-02-23 12:39:21 +1100;
5d5c76ade (origin/RELEASE_3_20, RELEASE_3_20) limma 3.62.2 by Gordon Smyth <[email protected]> 2025-01-09 16:39:35 +1100;
97a5846be Update changelog.txt by Gordon Smyth <[email protected]> 2025-01-09 16:08:58 +1100;
8da8c5d7a limma 3.63.3 - Corrections and additions to voomaLmFit help page. by Gordon Smyth <[email protected]> 2025-01-09 16:05:12 +1100;
39aac5218 (origin/master) limma 3.63.2 by Gordon Smyth <[email protected]> 2024-11-10 21:04:41 +1100;
bb03966a0 limma 3.62.1 by Gordon Smyth <[email protected]> 2024-11-03 11:28:13 +1100;
b0cd237f3 limma 3.63.1 by Gordon Smyth <[email protected]> 2024-11-03 11:20:00 +1100;
7959a5f0c bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <[email protected]> 2024-10-29 09:21:38 -0400;
c5fd118ec bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <[email protected]> 2024-10-29 09:21:38 -0400;
abeb1f309 Add code comment by Gordon Smyth <[email protected]> 2024-09-30 21:32:58 +1000;
0fe58f779 (origin/RELEASE_3_19, RELEASE_3_19) limma 3.60.6 by Gordon Smyth <[email protected]> 2024-09-30 21:32:23 +1000;
88eeaeeda limma 3.61.12 by Gordon Smyth <[email protected]> 2024-09-30 19:09:40 +1000;
5bfcb3353 limma 3.60.5 by Gordon Smyth <[email protected]> 2024-09-27 08:46:46 +1000;
2765e9fd1 limma 3.61.11 by Gordon Smyth <[email protected]> 2024-09-25 20:34:25 +1000;
21ae47894 limma 3.61.10 - Update NEWS.Rd ready for Bioconductor 3.20 release. - Revise eBayes() help page to further clarify `legacy` and `fc` arguments. by Gordon Smyth <[email protected]> 2024-09-22 17:33:42 +1000;
73140c3b0 Update changelog.txt for previous commit. by Gordon Smyth <[email protected]> 2024-08-04 17:32:23 +1000;
0601b4b53 limma 3.61.9 by Gordon Smyth <[email protected]> 2024-08-04 11:16:01 +1000;
06b40bb3f Add fitFDistUnequalDF1.R (part of limma 3.61.8) by Gordon Smyth <[email protected]> 2024-08-02 10:35:56 +1000;
e8ff47777 limma 3.61.8 by Gordon Smyth <[email protected]> 2024-08-02 10:34:36 +1000;
2403f2181 limma 3.61.7 by Gordon Smyth <[email protected]> 2024-07-30 20:19:51 +1000;
c06a5a6e0 Update changelog.txt for previous commit. by Gordon Smyth <[email protected]> 2024-07-29 22:50:54 +1000;
f558b5cd8 limma 3.61.6 by Gordon Smyth <[email protected]> 2024-07-29 22:21:21 +1000;
eb9d55613 limma 3.61.5 by Gordon Smyth <[email protected]> 2024-07-22 10:49:06 +1000;
481eb977d limma 3.60.4 by Gordon Smyth <[email protected]> 2024-07-15 16:33:05 +1000;
10f6331b1 limma 3.61.4 by Gordon Smyth <[email protected]> 2024-07-15 16:24:47 +1000;
672fe63a2 limma 3.61.3 by Gordon Smyth <[email protected]> 2024-07-15 15:25:45 +1000;
1be8eb439 Fill in comment on changelog.txt by Gordon Smyth <[email protected]> 2024-06-14 21:10:41 +1000;
d3ba94a82 limma 3.60.3 by Gordon Smyth <[email protected]> 2024-06-14 21:04:41 +1000;
bd4dd984d limma 3.61.2 by Gordon Smyth <[email protected]> 2024-06-14 20:29:44 +1000;
8b2c79ab3 limma 3.61.1 by Gordon Smyth <[email protected]> 2024-05-19 21:26:01 +1000;
6a0c6b0ad 19 May 2024: limma 3.60.2 by Gordon Smyth <[email protected]> 2024-05-19 21:16:09 +1000;
a48fa60b1 limma 3.60.1 by Gordon Smyth <[email protected]> 2024-05-19 12:04:36 +1000;
d852dafad Add Mengbo Li as author on vooma() by Gordon Smyth <[email protected]> 2024-05-12 18:28:33 +1000;
13b0eabcc Update changelog.txt for version bump by Gordon Smyth <[email protected]> 2024-05-01 21:41:53 +1000;
026ff48b1 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <[email protected]> 2024-04-30 10:11:28 -0400;
8aaf57d6e bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <[email protected]> 2024-04-30 10:11:28 -0400;
dbf9c6601 Code formatting: voom() arguments over multiple lines. by Gordon Smyth <[email protected]> 2024-04-23 21:07:41 +1000;
87d269e50 limma 3.59.10 by Gordon Smyth <[email protected]> 2024-04-23 20:53:25 +1000;
fd7a4d1a0 limma 3.59.9 by Gordon Smyth <[email protected]> 2024-04-22 15:48:19 +1000;
5fe635307 limma 3.59.8 by Gordon Smyth <[email protected]> 2024-04-08 10:13:24 +1000;
6e20c8fa9 limma 3.59.7 by Gordon Smyth <[email protected]> 2024-04-08 09:19:36 +1000;
558317062 limma 3.59.6 by Gordon Smyth <[email protected]> 2024-03-15 18:55:30 +1100;
279db536f limma 3.59.5 by Gordon Smyth <[email protected]> 2024-03-04 21:32:29 +1100;
4f9a2c96c limma 3.59.4 by Gordon Smyth <[email protected]> 2024-03-04 21:18:58 +1100;
90dbdf170 limma 3.59.3 by Gordon Smyth <[email protected]> 2024-02-13 14:47:42 +1100;
036ce09e2 limma 3.59.3 by Gordon Smyth <[email protected]> 2024-02-13 13:30:35 +1100;
12bdb7a05 4 Feb 2024: limma 3.59.2 by Gordon Smyth <[email protected]> 2024-02-04 19:53:23 +1100;
27e81a0a1 (origin/RELEASE_3_18, RELEASE_3_18) limma 3.58.1 by Gordon Smyth <[email protected]> 2023-10-31 07:50:54 +1100;
1f9532210 limma 3.59.1 by Gordon Smyth <[email protected]> 2023-10-30 23:24:49 +1100;
a7065451f Update changelog.txt to reflect Bioconductor 3.18 release and version bump. by Gordon Smyth <[email protected]> 2023-10-26 16:11:40 +1100;
ca949906a bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <[email protected]> 2023-10-24 09:32:11 -0400;
468495102 bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <[email protected]> 2023-10-24 09:32:11 -0400;
6b32eb5bf limma 3.57.12 by Gordon Smyth <[email protected]> 2023-10-24 09:17:30 +1100;
bbb074cea limma 3.57.11 by Gordon Smyth <[email protected]> 2023-10-18 12:57:54 +1100;
d4c67e027 11 Oct 2023: limma 3.57.10 by Gordon Smyth <[email protected]> 2023-10-11 22:02:46 +1100;
72eb58d73 limma 3.57.9 by Gordon Smyth <[email protected]> 2023-09-29 18:25:37 +1000;
21acd72c7 limma 3.57.8 by Gordon Smyth <[email protected]> 2023-09-23 11:16:13 +1000;
ed08a43ea 02 Aug 2023: limma 3.57.7 by Gordon Smyth <[email protected]> 2023-08-02 08:49:17 +1000;
ca7729d93 limma 3.57.6 by Gordon Smyth <[email protected]> 2023-06-19 13:30:29 +1000;
464857999 limma 3.57.5 by Gordon Smyth <[email protected]> 2023-06-18 19:59:58 +1000;
d658473af Forgot to add usersguide.Rnw in previous commit. by Gordon Smyth <[email protected]> 2023-06-18 18:44:54 +1000;
c4a5769e1 11 June 2023: limma 3.57.4 - Use LaTeX includepdf to import usersguide.pdf into Sweave vignette. - Expand Introduction vignette. by Gordon Smyth <[email protected]> 2023-06-11 21:18:12 +1000;
6f9e7c3af limma 3.57.3 by Gordon Smyth <[email protected]> 2023-06-10 11:18:21 +1000;
e19b8e7bd (origin/RELEASE_3_17, RELEASE_3_17) limma 3.56.2 by Gordon Smyth <[email protected]> 2023-06-03 20:12:30 +1000;
24e6daf2c limma 3.57.2 by Gordon Smyth <[email protected]> 2023-06-03 20:03:16 +1000;
ff198eec4 limma 3.56.1 by Gordon Smyth <[email protected]> 2023-05-06 15:11:09 +1000;
ead2f3705 limma 3.57.1 by Gordon Smyth <[email protected]> 2023-05-06 15:05:42 +1000;
89d376b06 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <[email protected]> 2023-04-25 09:39:04 -0400;
efe857829 bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <[email protected]> 2023-04-25 09:39:04 -0400;
6a0e8f784 limma 3.55.10 by Gordon Smyth <[email protected]> 2023-04-22 10:07:06 +1000;
12f195700 limma 3.55.9 by Gordon Smyth <[email protected]> 2023-04-22 09:22:48 +1000;
c876b39f7 limma 3.55.8 by Gordon Smyth <[email protected]> 2023-04-21 22:36:58 +1000;
72c22caa6 Replace http://www.statsci.org/smyth with https://gksmyth.github.io by Gordon Smyth <[email protected]> 2023-04-21 20:52:31 +1000;
e19c6a843 Rsubread RNAseqCaseStudy now on sourceforge.net by Gordon Smyth <[email protected]> 2023-04-21 20:51:09 +1000;
32962e36d limma 3.55.7 by Gordon Smyth <[email protected]> 2023-04-10 12:56:12 +1000;
9752b6666 limma 3.55.6 by Gordon Smyth <[email protected]> 2023-03-28 08:36:02 +1100;
6641c256c (origin/RELEASE_3_16, RELEASE_3_16) limma 3.54.2 by Gordon Smyth <[email protected]> 2023-02-28 18:45:44 +1100;
5273438d9 limma 3.55.5 by Gordon Smyth <[email protected]> 2023-02-28 18:30:51 +1100;
1fe33a375 limma 3.55.4 by Gordon Smyth <[email protected]> 2023-01-26 17:36:44 +1100;
e4e922d5d limma 3.54.1 by Gordon Smyth <[email protected]> 2023-01-26 17:18:05 +1100;
6ecfa0620 Minor correction to description section. by Gordon Smyth <[email protected]> 2023-01-26 17:01:11 +1100;