man/omada.Rd
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 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/omada.R
 \name{omada}
 \alias{omada}
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 \title{A wrapper function that utilizes all tools to produce the optimal
 sample memberships}
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 \usage{
 omada(data, method.upper.k = 5)
 }
 \arguments{
 \item{data}{A dataframe, where columns are features and rows are data points}
 
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 \item{method.upper.k}{The upper limit of clusters, k, to be considered.
 Must be more than 2}
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 }
 \value{
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 An object of class "clusterAnalysis" containing
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 partition.agreement.scores,partition.agreement.plot,feature.selection.scores,
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 feature.selection.plot, feature.selection.optimal.features,
 feature.selection.optimal.number.of.features, cluster.voting.scores,
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 cluster.voting.cluster.memberships,cluster.voting.metric.votes,
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 }
 \description{
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 A wrapper function that utilizes all tools to produce the optimal
 sample memberships
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 }
 \examples{
 omada(toy_genes, method.upper.k = 3)
 }