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Added importFrom statements Edited vignette to remove structure related sections Remove structure related tests Updated Rd files

cannin authored on 17/04/2020 15:48:36
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@@ -4,8 +4,11 @@
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 \alias{getDrugActivityRepeatData}
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 \title{Returns a matrix containing repeat activity experiment data for a compound.}
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 \usage{
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-getDrugActivityRepeatData(nscStr, concFormat = "NegLogGI50M",
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-  onlyCellMinerExps = TRUE)
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+getDrugActivityRepeatData(
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+  nscStr,
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+  concFormat = "NegLogGI50M",
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+  onlyCellMinerExps = TRUE
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+)
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 }
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 \arguments{
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 \item{nscStr}{a string specifying the NSC identifier for the compound.}
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@@ -31,6 +34,4 @@ actData <- getDrugActivityRepeatData(nscStr, concFormat='NegLogGI50M')
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 actData <- getDrugActivityRepeatData(nscStr, concFormat='IC50MicroM')
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 }
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-\concept{
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-rcellminer
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-}
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+\concept{rcellminer}
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Minor documentation update Updated analytics Updated about.md

cannin authored on 29/03/2017 21:43:19
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@@ -34,4 +34,3 @@ actData <- getDrugActivityRepeatData(nscStr, concFormat='IC50MicroM')
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 \concept{
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 rcellminer
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 }
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-
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Adding parCorPatternComparison() function to do pattern comparisons based on partial correlations with respect to a fixed pattern (whose influence with respect to a linear model is to be excluded).

Vinodh N. Rajapakse authored on 09/08/2016 18:28:29
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@@ -1,4 +1,4 @@
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-% Generated by roxygen2 (4.1.1): do not edit by hand
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+% Generated by roxygen2: do not edit by hand
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 % Please edit documentation in R/getDrugActivityRepeatData.R
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 \name{getDrugActivityRepeatData}
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 \alias{getDrugActivityRepeatData}
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@@ -12,14 +12,14 @@ getDrugActivityRepeatData(nscStr, concFormat = "NegLogGI50M",
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 \item{concFormat}{a string selected from "NegLogGI50M" or "IC50MicroM".
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 "NegLogGI50M" specifies activities as the negative log of the 50% growth
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-inhibitory concentration (molar). "IC50MicroM" specifies activities as the 50%
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+inhibitory concentration (molar). "IC50MicroM" specifies activities as the 50% 
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 growth inhibitory concentration (micromolar).}
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 \item{onlyCellMinerExps}{a logical value indicating whether to only return
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 experimental data included in CellMiner (default=TRUE).}
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 }
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 \value{
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-a matrix with activity data from each experiment associated with
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+a matrix with activity data from each experiment associated with 
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 a compound organized along the rows.
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 }
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 \description{
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@@ -29,6 +29,7 @@ Returns a matrix containing repeat activity experiment data for a compound.
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 nscStr <- "609699"
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 actData <- getDrugActivityRepeatData(nscStr, concFormat='NegLogGI50M')
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 actData <- getDrugActivityRepeatData(nscStr, concFormat='IC50MicroM')
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+
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 }
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 \concept{
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 rcellminer
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Initial commit

cannin authored on 25/02/2016 02:26:31
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new file mode 100644
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@@ -0,0 +1,36 @@
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+% Generated by roxygen2 (4.1.1): do not edit by hand
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+% Please edit documentation in R/getDrugActivityRepeatData.R
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+\name{getDrugActivityRepeatData}
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+\alias{getDrugActivityRepeatData}
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+\title{Returns a matrix containing repeat activity experiment data for a compound.}
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+\usage{
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+getDrugActivityRepeatData(nscStr, concFormat = "NegLogGI50M",
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+  onlyCellMinerExps = TRUE)
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+}
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+\arguments{
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+\item{nscStr}{a string specifying the NSC identifier for the compound.}
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+
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+\item{concFormat}{a string selected from "NegLogGI50M" or "IC50MicroM".
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+"NegLogGI50M" specifies activities as the negative log of the 50% growth
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+inhibitory concentration (molar). "IC50MicroM" specifies activities as the 50%
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+growth inhibitory concentration (micromolar).}
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+
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+\item{onlyCellMinerExps}{a logical value indicating whether to only return
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+experimental data included in CellMiner (default=TRUE).}
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+}
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+\value{
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+a matrix with activity data from each experiment associated with
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+a compound organized along the rows.
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+}
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+\description{
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+Returns a matrix containing repeat activity experiment data for a compound.
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+}
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+\examples{
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+nscStr <- "609699"
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+actData <- getDrugActivityRepeatData(nscStr, concFormat='NegLogGI50M')
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+actData <- getDrugActivityRepeatData(nscStr, concFormat='IC50MicroM')
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+}
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+\concept{
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+rcellminer
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+}
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+