1. rcellminer
  2. man
  3. restrictFeatureMat.Rd
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Added importFrom statements Edited vignette to remove structure related sections Remove structure related tests Updated Rd files

cannin authored on 17/04/2020 15:48:36
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man/restrictFeatureMat.Rd
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@@ -28,6 +28,4 @@ restrictFeatureMat(geneSet = c("B", "C"), X)
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 \description{
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 Restricts a feature matrix to only include features associated with a specified gene set.
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 }
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-\concept{
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-rcellminer
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-}
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+\concept{rcellminer}
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Minor documentation update Updated analytics Updated about.md

cannin authored on 29/03/2017 21:43:19
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man/restrictFeatureMat.Rd
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@@ -31,4 +31,3 @@ Restricts a feature matrix to only include features associated with a specified
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 \concept{
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 rcellminer
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 }
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-
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Adding parCorPatternComparison() function to do pattern comparisons based on partial correlations with respect to a fixed pattern (whose influence with respect to a linear model is to be excluded).

Vinodh N. Rajapakse authored on 09/08/2016 18:28:29
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man/restrictFeatureMat.Rd
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@@ -1,4 +1,4 @@
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-% Generated by roxygen2 (4.1.1): do not edit by hand
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+% Generated by roxygen2: do not edit by hand
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 % Please edit documentation in R/restrictFeatureMat.R
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 \name{restrictFeatureMat}
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 \alias{restrictFeatureMat}
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@@ -12,24 +12,22 @@ restrictFeatureMat(geneSet, featureMat, prefixSet = c("cop", "exp", "mut"))
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 \item{featureMat}{a matrix or data frame with feature vectors along rows and feature
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 names specified in rownames(featureMat).}
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-\item{prefixSet}{a set of feature name prefixes to be prepended to each element of geneSet to
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+\item{prefixSet}{a set of feature name prefixes to be prepended to each element of geneSet to
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 obtain a collection of geneSet-associated features.}
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 }
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 \value{
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 a matrix containing the features in the intersection of rownames(featureMat) and
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-the set of geneSet-derived features (obtained by prepending each element of prefixSet to
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+the set of geneSet-derived features (obtained by prepending each element of prefixSet to
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 each gene in geneSet).
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-#'
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-}
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-\description{
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-Restricts a feature matrix to only include features associated with a specified gene set.
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-}
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-\examples{
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+#' @examples
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 X <- matrix(1:25, nrow=5)
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 rownames(X) <- c("expA", "expB", "copC", "mutC", "expD")
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 restrictFeatureMat(geneSet = c("B", "C"), X)
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 }
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+\description{
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+Restricts a feature matrix to only include features associated with a specified gene set.
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+}
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 \concept{
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 rcellminer
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 }
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Initial commit

cannin authored on 25/02/2016 02:26:31
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man/restrictFeatureMat.Rd
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new file mode 100644
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@@ -0,0 +1,36 @@
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+% Generated by roxygen2 (4.1.1): do not edit by hand
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+% Please edit documentation in R/restrictFeatureMat.R
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+\name{restrictFeatureMat}
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+\alias{restrictFeatureMat}
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+\title{Restricts a feature matrix to only include features associated with a specified gene set.}
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+\usage{
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+restrictFeatureMat(geneSet, featureMat, prefixSet = c("cop", "exp", "mut"))
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+}
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+\arguments{
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+\item{geneSet}{a character vector of gene names.}
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+
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+\item{featureMat}{a matrix or data frame with feature vectors along rows and feature
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+names specified in rownames(featureMat).}
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+
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+\item{prefixSet}{a set of feature name prefixes to be prepended to each element of geneSet to
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+obtain a collection of geneSet-associated features.}
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+}
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+\value{
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+a matrix containing the features in the intersection of rownames(featureMat) and
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+the set of geneSet-derived features (obtained by prepending each element of prefixSet to
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+each gene in geneSet).
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+
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+#'
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+}
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+\description{
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+Restricts a feature matrix to only include features associated with a specified gene set.
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+}
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+\examples{
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+X <- matrix(1:25, nrow=5)
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+rownames(X) <- c("expA", "expB", "copC", "mutC", "expD")
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+restrictFeatureMat(geneSet = c("B", "C"), X)
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+}
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+\concept{
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+rcellminer
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+}
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+