man/calcEffectSizes.Rd
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 % Generated by roxygen2: do not edit by hand
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 % Please edit documentation in R/DownsampleMatrix.R
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 \name{calcEffectSizes}
 \alias{calcEffectSizes}
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 \title{Finds the effect sizes for all genes in the original dataset, regardless of
 significance.}
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 \usage{
 calcEffectSizes(countMatrix, condition)
 }
 \arguments{
 \item{countMatrix}{Matrix. A simulated counts matrix, sans labels.}
 
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 \item{condition}{Factor. The condition labels for the simulated cells. If
 more than 2 conditions are given, the first will be compared to all others by
 default.}
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 }
 \value{
 A vector of cohen's d effect sizes for each gene.
 }
 \description{
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 Finds the effect sizes for all genes in the original dataset, regardless of
 significance.
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 }
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 \examples{
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 data("mouseBrainSubsetSCE")
 res <- calcEffectSizes(assay(mouseBrainSubsetSCE, "counts"),
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                        condition = colData(mouseBrainSubsetSCE)$level1class)
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 }