man/scaterCPM.Rd
90699b4b
 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/scater_CPM.R
f3ec30cd
 \name{scaterCPM}
 \alias{scaterCPM}
 \title{scaterCPM
90699b4b
 Uses CPM from scater library to compute counts-per-million.}
 \usage{
f3ec30cd
 scaterCPM(inSCE, assayName = "ScaterCPMCounts", useAssay = "counts")
90699b4b
 }
 \arguments{
 \item{inSCE}{Input SingleCellExperiment object}
 
 \item{assayName}{New assay name for cpm data.}
 
 \item{useAssay}{Input assay}
 }
 \value{
 inSCE Updated SingleCellExperiment object
 }
 \description{
f3ec30cd
 scaterCPM
90699b4b
 Uses CPM from scater library to compute counts-per-million.
 }
 \examples{
 data(sce_chcl, package = "scds")
a9896990
 sce_chcl <- scaterCPM(sce_chcl,"countsCPM", "counts")
90699b4b
 }
 \author{
 Irzam Sarfraz
 }