Table of Contents

METHODS

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Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays
- Heather L. Stickney,
- Jeremy Schmutz,
- Ian G. Woods,
- Caleb C. Holtzer,
- Mark C. Dickson,
- Peter D. Kelly,
- Richard M. Myers,
- and William S. Talbot
Genome Res. December 1, 2002 12: 1929-1934; doi:10.1101/gr.777302
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A Novel Method for SNP Detection Using a New Duplex-Specific Nuclease From Crab Hepatopancreas
- Dmitry A. Shagin,
- Denis V. Rebrikov,
- Valery B. Kozhemyako,
- Ilia M. Altshuler,
- Alex S. Shcheglov,
- Pavel A. Zhulidov,
- Ekaterina A. Bogdanova,
- Dmitry B. Staroverov,
- Valery A. Rasskazov,
- and Sergey Lukyanov
Genome Res. December 1, 2002 12: 1935-1942; doi:10.1101/gr.547002
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Generalized Gap Model for Bacterial Artificial Chromosome Clone Fingerprint Mapping and Shotgun Sequencing
- Michael C. Wendl and
- Robert H. Waterston
Genome Res. December 1, 2002 12: 1943-1949; doi:10.1101/gr.655102
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A Scalable High-Throughput Chemical Synthesizer
- Eric A. Livesay,
- Ying-Horng Liu,
- Kevin J. Luebke,
- Joel Irick,
- Yuri Belosludtsev,
- Simon Rayner,
- Robert Balog,
- and Stephen Albert Johnston
Genome Res. December 1, 2002 12: 1950-1960; doi:10.1101/gr.359002
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A Strategy to Retrieve the Whole Set of Protein Modules in Microbial Proteomes
- Stéphanie Le Bouder-Langevin,
- Isabelle Capron-Montaland,
- Renaud De Rosa,
- and Bernard Labedan
Genome Res. December 1, 2002 12: 1961-1973; doi:10.1101/gr.393902
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A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa
- Chang-Xing Ma,
- George Casella,
- Zuo-Jun Shen,
- Thomas C. Osborn,
- and Rongling Wu
Genome Res. December 1, 2002 12: 1974-1981; doi:10.1101/gr.320202
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Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies
- David P. Hill,
- Judith A. Blake,
- Joel E. Richardson,
- and Martin Ringwald
Genome Res. December 1, 2002 12: 1982-1991; doi:10.1101/gr.580102
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Highly Efficient Modification of Bacterial Artificial Chromosomes (BACs) Using Novel Shuttle Vectors Containing the R6Kγ Origin of Replication
- Shiaoching Gong,
- Xiangdong William Yang,
- Chenjian Li,
- and Nathaniel Heintz
Genome Res. December 1, 2002 12: 1992-1998; doi:10.1101/gr.476202

RESOURCE

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Assembly, Verification, and Initial Annotation of the NIA Mouse 7.4K cDNA Clone Set
- Vincent VanBuren,
- Yulan Piao,
- Dawood B. Dudekula,
- Yong Qian,
- Mark G. Carter,
- Patrick R. Martin,
- Carole A. Stagg,
- Uwem C. Bassey,
- Kazuhiro Aiba,
- Toshio Hamatani,
- George J. Kargul,
- Amber G. Luo,
- Janet Kelso,
- Winston Hide,
- and Minoru S.H. Ko
Genome Res. December 1, 2002 12: 1999-2003; Published in Advance November 12, 2002, doi:10.1101/gr.633802

LETTERS

Interrogating a High-Density SNP Map for Signatures of Natural Selection

Evidence for a Fast, Intrachromosomal Conversion Mechanism From Mapping of Nucleotide Variants Within a Homogeneous α-Satellite DNA Array

Distribution and Characterization of Regulatory Elements in the Human Genome

Selecting for Functional Alternative Splices in ESTs

Haplotype and Linkage Disequilibrium Architecture for Human Cancer-Associated Genes

Retroposed New Genes Out of the X in Drosophila

Domain Regulation of Imprinting Cluster in Kip2/Lit1 Subdomain on Mouse Chromosome 7F4/F5: Large-Scale DNA Methylation Analysis Reveals That DMR-Lit1 Is a Putative Imprinting Control Region

Diversity in Nucleotide Binding Site–Leucine-Rich Repeat Genes in Cereals

A Nonsense Mutation in the FMO3 Gene Underlies Fishy Off-Flavor in Cow's Milk

Extreme Pathway Lengths and Reaction Participation in Genome-Scale Metabolic Networks

Large Functional Range of Steady-State Levels of Nuclear and Mitochondrial Transcripts Coding for the Subunits of the Human Mitochondrial OXPHOS System

The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications

Gene Expression Profiling of Embryo-Derived Stem Cells Reveals Candidate Genes Associated With Pluripotency and Lineage Specificity

METHODS

Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays

A Novel Method for SNP Detection Using a New Duplex-Specific Nuclease From Crab Hepatopancreas

Generalized Gap Model for Bacterial Artificial Chromosome Clone Fingerprint Mapping and Shotgun Sequencing

A Scalable High-Throughput Chemical Synthesizer

A Strategy to Retrieve the Whole Set of Protein Modules in Microbial Proteomes

A Unified Framework for Mapping Quantitative Trait Loci in Bivalent Tetraploids Using Single-dose Restriction Fragments: A Case Study from Alfalfa

Extension and Integration of the Gene Ontology (GO): Combining GO Vocabularies With External Vocabularies

Highly Efficient Modification of Bacterial Artificial Chromosomes (BACs) Using Novel Shuttle Vectors Containing the R6Kγ Origin of Replication

RESOURCE

Assembly, Verification, and Initial Annotation of the NIA Mouse 7.4K cDNA Clone Set

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