Archive for March, 2025

African Monkey Speciation

March 27, 2025

About 75 species of monkey occur in Africa, but scientists don’t agree on the exact number. Changing climates over time have contributed to the large number of species. Most species of monkeys depend on trees for safety and foraging resources. During dry climate phases, wooded habitats in Africa often became restricted to riverside gallery forests because trees need to grow near water when conditions are arid. As a consequence, monkey populations restricted to riverine forests became isolated from each other and evolved into different species. This is known as speciation. Africa is home to 16 species of colobus monkeys, 13 species of mangabey monkeys, 1 species of macaque, 1 species of gelada baboon, 5 species of baboons in the Papio genus, 2 species of mandrills, and 33 species of guenon monkeys. The diversity of guenon species gives scientists an interesting opportunity to study how these monkeys speciated.

Black and white colobus monkeys are the most common species of colobus monkey.

There are 13 species of mangabey monkeys. Monkeys get isolated from each other during dry climate phases when they become restricted to smaller forest islands separated by unsuitable desert grassland habitat. That explains why there are so many different but closely related species.

There are about 33 species of guenon monkeys.

1 study looked at the entire genome of mona monkeys. Another study looked at the entire genome of 22 species of guenon monkeys.

1 study looked at the entire genome of 22 species of guenon monkeys. Scientists believe monkeys began to diverge from each other about 10-15 million years ago. The study found genetic evidence of ancient hybridization which contributed to speciation. Species of monkeys isolated for a long enough time to become distinct species hybridize when populations come back into contact with each other following climate change. This hybridization contributes to further speciation. Populations isolated during dry climate phases then reconnect during wet climate phases when forest habitats again expand. Scientists found that some modern species of guenon can hybridize with each other and produce fertile offspring despite having been isolated from each other for 5 million years. Hybrids can eventually evolve into yet another species. Scientists determined clades with the most species are more admixed.

Another study looked at the genome of just 1 species of guenon–the mona monkey (Cercopithecus mona). There are eastern and western populations of this species separated by the Niger River. Scientists who wrote this study determined the 2 populations diverged 84,000 years ago. The eastern population shows evidence of hybridization with their closest relatives, but the western population does not. Scientists think these populations are beginning to evolve into different species. Guenon monkeys have rapidly evolved resistance to the malaria virus–another interesting discovery of this study.

Some speciation can also occur when populations of the same species stay in contact with each other. Some populations of monkeys become better adapted to different tree canopy levels. Monkeys preferring to forage on the ground or lower in the tree canopy may stop mating with monkeys that forage higher in the tree canopy and speciation may occur as a result of this difference in preferences. Monkeys in these situations may evolve different color patterns and physical appearances and stop recognizing monkeys with different preferences as potential mates.

References:

Ayoola, A. et al

“Population Genomics Reveals Incipient Speciation, Introgression, and Adaptation in the African mona monkey (Cercopithecus mona)”

Molecular Biology and Evolution 38 (3) 2021

https://academic.oup.com/mbe/article/38/3/876/5912538

Jensen, A. et al

“Complex Evolutionary History with Extensive Ancestral Gene Flow in an African Primate Radiation”

Molecular Biology and Evolution 40 (12) December 2023

https://academic.oup.com/mbe/article/40/12/msad247/7439455

Seal Evolution

March 20, 2025

One of the lies creationists claim about the Theory of Evolution is that there are no transitional fossils. There are thousands of species in the fossil record that could be considered transitional. The evolutionary lineage of many extant species is well documented, and there are many potential transitional species living today. Moreover, the fossil record of transitional species is well supported by genetic evidence. The fossil record shows the most ancient known ancestor of modern whales was hippo-like. And genetic evidence proves hippos are the closest living land relative of whales. An animal very similar to the earliest known ancestor of whales is still extant. The same is true for seals. The oldest known ancestor of seals was an otter-like animal. And genetic evidence proves the mustelids (a group including weasels, otters, skunks, and badgers) are the closest living land relatives of seals. Present day species of otters and hippos might be transitional species evolving from a terrestrial existence to an even more aquatic life.

Artists’s representation of Puzilla darwini, the oldest known ancestor of modern seals. It is otter-like, and genetic evidence shows mustelids are the closest living relatives of seals.

Artist’s representation of enaliarctos. It clearly has features transitional between a mustelid and a seal.

Allodesmus was yet another evolutionary step between mustelids and seals.

Genetic evidence suggests pinnipeds (seals, sea lions, and walruses) diverged from the other caniformes (a group including bears, dogs, weasels, and raccoons) about 50 million years ago. They diverged from mustelids 46.15 million years ago. The pinnipeds are considered to be a sister group to weasels, skunks, raccoons, and red pandas. The earliest known ancestor of seals dates to 30 million years ago and is known by the scientific name of Puzilla darwini. It’s remarkably otter-like. Other ancestral species of seal include enaliarctos, pteranarctos, allodesmus, desmatophoca, and leptophoca. Genetic evidence suggests ancestors of earless seals diverged from ancestors of sea lions 25 million years ago. The oldest fossils of walruses date to 18-16 million years ago. The extinction rate for walruses exceeded the speciation rate between 12-6 million years ago. Scientists don’t know whether this is due to fluctuating sea levels or competition with newly evolved species of sea lions. Species with near global distribution are more resistant to extinction.

Today, there are 3 families of seals and 33 species. These include 18 species of true seals (the phocidae), 14 species of sea lions and fur seals (the otaridae), and 1 species of walrus (the odenibae).

References:

Park, T.; et. al.

“Charting the Course of Pinniped Evolution: Insights from Molecular Phylogeny and Fossil Interpretation”

Evolution 78 (7) July 2024

https://www.researchgate.net/publication/379999642_Charting_the_Course_of_Pinniped_Evolution_insights_from_molecular_phylogeny_and_fossil_record_integration

Paterson, R.; N. Rybcynski, N. Kohno, H. Mudd

“A Total Evidence Phylogenetic Analysis of Pinniped Phylogeny and the Possibility of Parallel Evolution”

Frontiers Ecology and Evolution January 2020

https://www.frontiersin.org/journals/ecology-and-evolution/articles/10.3389/fevo.2019.00457/full

Gelada Fields and Wild Coffee Trees

March 13, 2025

The highlands of Ethiopia host a unique fauna quite different from the typical species one expects when they think of Africa. During the Miocene, an era that ended 5 million years ago, much of the region was uninhabitable because of rampant vulcanism, then the climate fluctuations of the Pliocene and the Pleistocene made the environment a difficult region for many of Africa’s more famous species. During Ice Ages glaciers expanded on top of the highest elevations. The region is also isolated from the rest of Africa by rivers and rift valley cliffs. However, the isolation has protected some species that were formerly more widespread in Africa during the Pleistocene. Fossil evidence suggests gelada baboons (Therapithicus gelada) and mountain nyalas (Tragalophus buxtoni) occurred over much of Africa during the Pleistocene, but today they are restricted to the Ethiopian highlands. Both live in regions once difficult for humans to access. Geladas feed in troops of over 100, and when they forage through an area, they devastate the plant life. Certain species of plants then invade these gelada fields. Geladas sleep on cliffs, safe from predators, and they huddle together. This, along with their thick coats, helps them endure the cold nights of the African alpine grasslands. Nubian ibex also hop along the cliffs that predators have a hard time reaching.

Gelada baboons sit on their haunches and eat grass all day, creating gelada fields. They devastate the plant life when they forage. Different species of plants then colonize the disturbed area.

Mountain nyalas feed upon the aromatic herbs that grow on Afro-alpine grasslands.

Nubian ibex are safe from most natural predators on inaccessible cliffs.

Ethiopian wolves specialize in hunting large rats that inhabit the highlands.

Thick-billed ravens use their bills to sift through rat middens to find animal and plant matter. Wattled cranes also sift through rat middens.

There are 8 endemic species of rodents on the Ethiopian highlands including grass rats (Arvicanthus blicki) and root rats (Tachyoryctes macrocephala). Eagles and Ethiopian wolves (Canis sinensis) prey on these rats. The wolves specialize in ambushing them–their teeth are better adapted to hunting these large biting rodents than jackal’s teeth are. Ethiopian highland birdlife too is unique. The blue-winged sheldgoose (Cyanochen cyanoptera) is a grazing goose with a population that formerly was thought to have been founded by a vagrant from the South American grasslands where it was thought to have originated. The similarity with South American geese seems to be an example of convergent evolution because genetic evidence suggests it is most closely related to another species of African shelduck. Humans felling trees in Ethiopia’s forests opened up more favorable habitat for white collared pigeons and thick billed ravens, 2 of the more common birds in the country.

The Kaffa Biosphere Reserve in Ethiopia hosts more typical African wildlife including 178 species of birds, and an astonishing 300 species of mammals. Although over 600,000 people live here, there are still elephants, hippos, lions (though rare), water buffalo, reed buck, duikers, 4 species of mongoose, genets, servals, civets, honey badgers, olive baboons, and many other species of monkeys. Habitats include cloud forests, montane forests, riverine forests, bamboo jungles, and wetlands. Kaffa literally means coffee, and wild coffee trees still grow here.

Location and map of the Kaffa Biosphere Reserve in Ethiopia.

Wild coffee (Coffee arabica) grows in the understory of forests that used to be dominated by yellow wood, sandalwood, stink wood, and crotus. Today, these overstory trees have mostly been replaced by invasive Australian species. People still gather wild coffee fruits. The fruits are edible, but the coffee we drink is made from the seeds after they have been roasted and ground. Ethiopia is where coffee originated, and the country’s farms produce quality coffee. However, 85% of the coffee consumed in the world is grown in Latin America. The leading coffee producers are Columbia, Jamaica, Guatemala, and Costa Rica. Coffee is also grown in Hawaii where it has escaped cultivation to become an invasive species. C. arabica prefers to grow in the foothills of cloud forests, but another species C. camphora grows in tropical forests. Neither species can survive frost.

Reference:

Kingdom, J.

Island Africa

Princeton University Press 1989

New Study Reviews Evidence of Human-Megafauna Interactions in Mexico During the Late Pleistocene

March 6, 2025

A new study reviewed all the documented evidence of humans hunting or butchering megafauna in Mexico during the late Pleistocene. The authors of this study believe there is not enough research yet on this subject. Species from 14 different families of mammals became extinct during the late Pleistocene in Mexico including ground sloths, glyptodonts, elephant relatives, toxodons, horses; and some species of bears, wolves, and big cats. There is evidence of humans hunting or butchering some of these species, but the authors of this study make the wishy-washy conclusion that there is not enough evidence to determine whether human hunting caused their extinctions.

The authors of this study found 30 Mexican sites in the literature with evidence of humans exploiting megafauna. 15 sites were in the Trans Mexican Volcanic Belt, 5 sites were in the Sierra Madre Oriental, 4 sites were in the Yucatan, 2 sites were in the northern Gulf Coastal Plain, and 2 sites were in the Sierra Madre Del Sur. 4 regions of Mexico have no evidence of human-megafauna interaction. Species of megafauna exploited by humans at these sites include 15 mammoths, 3 gompotheres, 3 camels or llamas, 2 horses, 1 bison, 1 ground sloth, 1 glyptodont, 1 pronghorn, 1 black bear, 1 big horned sheep, 1 tapir, 1 peccary, 1 saber-tooth, and 1 undetermined species of large canid. The evidence at some sites is obvious. At the Tocuila site there was evidence of 7 butchered mammoths. At other sites such as the 1 with the peccary, saber-tooth, and canid the bones are merely found in association with archaeological evidence.

Regions of Mexico. Map from the below study. The Trans-Mexican Volcanic Belt had the most evidence of human-megafauna interaction. It may have hosted the most favorable habitat for large mammals.

Artist’s depiction of paleoindians hunting mastodon. I don’t know who drew this. I doubt it took this many men to bring down a large mammal. 1 accurately thrown spear could kill it.

The authors of the study report that not many of these sites had good isotopic data or radiocarbon dates on the bones. Instead, the sites were dated using a combination of biochronology and radiocarbon dates of the organic matter where the bones were found. The authors mention the ridiculous conclusion from a study I wrote about a few months ago (See: https://markgelbart.wordpress.com/2024/11/20/flawed-study-suggests-anthropogenic-fires-caused-the-extirpations-of-megafauna-near-the-la-brea-tar-pits/ ) that determined megafauna near the La Brea Tar Pits became extinct because the environment became more arid. I suggested this was an absurd assumption because horses, camels, and lions are all well-adapted to living in arid environments.

Reference:

Solis-Torres, O.; J. Arroyo-Cabrales, P. Roberts, and N. Amano

“A Critical Review of Late Pleistocene Human and Megafaunal Interactions in Mexico”

Quaternary Science Reviews April 2025

https://www.sciencedirect.com/science/article/pii/S0277379125000204


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