Open Source JavaScript Data Management Systems for BSD

Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and compared. A rich scripting language and a well-developed web API allow easy customization of the user interface. Features include interactive animation and linear morphing. Jmol interfaces well with JSpecView for spectroscopy, JSME for 2D->3D conversion, POV-Ray for images, and CAD programs for 3D printing (VRML export).

MathMod is a portable interactive plotting and graphing program for Windows, Linux, MacOSX and many other platforms. MathMod allows to plot 3D mathematical surfaces, described by implicit or parametric equations, and offers a very large database of model samples that can be generated with it. It's Free and Open Source. Change-log for MathMod-13.0 (15/11/2025) 1) Scripts generator to add thickness to iso/parametric surfaces 2) Undo/Redo commands for navigating through previous scripts 3) New scripts, Bug-fixes, code optimization and documentation update For a complete list of changes made during the course of development, please visit: https://github.com/users/parisolab/projects/2

CueMol - Molecular Visualization Framework based on OpenGL, Mozilla XULRunner, and javascript

GeoKettle is a powerful, metadata-driven spatial ETL (Extract, Transform and Load) tool dedicated to the integration of different data sources for building and updating geospatial databases, data warehouses and services.

BINViz(Bidirectional Interactive Network Visualization) is a JavaScript library for network and graph visualization. The goal of this tool is to provide a better way to visualize complex graphical models and the underlying data in a web-based environ

The purpose of the project is to develop a quantitative medical imaging & visualization program for use on brain MR, DTI and MRS data. It is a joint project of the Kennedy Krieger Institute & the Johns Hopkins University, Psychiatric Neuroimaging Lab

Goal of our project CSX (City Stats X) is to program a generic interface to visualize and present social data about a city. We will present this on the example of the city of Linz in Austria.

A toolkit for processing and visualising sensor data in real time with support for use with embedded platforms.

Compiere MFG+SCM Manufacturing Extended System (MES). Include Shop Floor Control, Supply chain management, Quality management, modbus interface, iReport barcode extension etc. Support batch and on demand manufacturing. Works alone or connected to ERP.

The application Crimeblips provides up-to-date crime statistics for Berlin (Germany). It maps and visualizes crimes, allowing users to identify crime hot spots, trends and general patterns. Bayesian algorithms are used to extract relevant information.

DRINKS Toolkit is a collection of web-based widget, focused in the first release, to realize an online strumentation. It provides a practical and immediate interface to represent your data in the best possible way. Every widget is drawed using HTML5 Canvas API in a Javascript based environment. Drinks was born to allow users to easily realize custom dashboards without any programming knowledge, infact, you can use your instrument on a webpage simply using HTML tags, or using BarMan IDE to create your applications in a click. DRINKS Toolkit (hardware and software) are released as Open Source project.

geolocate is a front-end java program that works with google maps to provide dynamic maps to users. Combined with the flexibility of XML and the power of javascript, users can see various relationships on their map to draw conclusions.

Humboldt-Viewer the StreetMap/Urban Guide for SMGOs! Humboldt-Viewer is an OGC standard compliant Lightweight Web Map Service Viewer with powerful features and interface customization. Lookout for Humboldt GeoPISTA/WMS Viewer and Humboldt WMS Viewer!

The Integrative Biology VRE is a web-based graphical user interface and repository that provides an environment where biological simulation experiments can be constructed without the need for any knowledge of unix, cluster computing, or shell scripting.

InterferenceSimulator is a program demonstrating quantal two-slit Fresnel interference patterns with one, the other, or both slits open. A magnetic flux situated between the two slits allows demonstration of the Aharonov–Bohm effect. Simulations with short de Broglie wavelengths illustrate the classical limit of quantum mechanics. Because of the universality of wave phenomena, this program can also demonstrate the geometrical-optics limit of wave optics for small wavelengths.

Krona allows hierarchical data to be explored with zoomable HTML5 pie charts. Krona charts can be created using an Excel template or Krona Tools, which includes support for several bioinformatics tools and raw data formats.

The METAR Repository or simply metarr is a web-mapping service, capable of gathering and visualizing METARs (meteorological aviation routine weather reports). So aeronautical weather information becomes browseable on a map, even for "METAR-illiterate"

Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.

PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this address: https://plateeditor.sourceforge.io - The source code is also available on GitHub, visit: https://github.com/vindelorme/PlateEditor More information about the source code and the API are available there (the wiki is still under construction, thanks for your patience!) For a list of recent updates, visit: https://sourceforge.net/p/plateeditor/wiki/Updates/ Hoping PlateEditor will make your life easier in the lab! If yes, please cite us: https://doi.org/10.1371/journal.pone.0252488

QTnew is a universal Queueing Theory simulator. Different types of serving disciplines, time distributions, routes are supported. Simulation is extremely flexible: any custom simulation can be performed with JavaScript.

The SPASE Data Model Explorer is a web browser application that enables interactive exploration of the SPASE data model. The data model is organized in a tree and dictionary entries rendered for viewing in the browser.

The SPASE Registry Explorer is a web browser application that enables interactive exploration of a SPASE compliant registry. The contents of a SPASE registry are organized in a tree and resource descriptions rendered for viewing in the browser.

SPIDR (Space Physics Interactive Data Resource) is a distributed database and application server network, built to select, visualize and model historical space weather data. SPIDR is a web-application and a grid of data mining web-services.

The application „StockNews“ is to offer the possibility to the user to find out about the interaction between news, analyst opinions and stock exchange rates. Statistics and other relevant data about enterprises are available.

This software enables easy creation and sharing of district maps online.