Open Source Python Scientific/Engineering Software for Linux

openGPR is a framework for the management, processing and 2D/3D-visualization of ground penetrating radar (GPR, georadar) data. It interoperates with existing tools like Seismic Unix, with a special focus on georadar applications.

This application provides a web based visual browser for NetCDF files. The application provides a simple and friendly user interface for getting a quick overview of the data contained in the files.

pyprime is a program / library for finding prime numbers.

This program minimizes boolean expressions. After combining minterms as far as possible, the program draws a chart of prime implicants which the user can easily read and manipulate to remove any remaining superfluous implicants.

Common Interface for NMR structure Generation.

Libraries for interacting with Tinytag Data Loggers from Gemini. Please note that this project is no longer maintained.

Scripts for evaluation and whole programs for measurements from work in "Institut für Angewandte Photophysik (www.iapp.de). The main work was "CaTE - Calcium Test Evaluation" (see Files).

Liegkat-Archiv delivers ALK converters for spatial data formats (EDBS, BGRUND, SQD, DFK, HK) and coordinate systems used in German cadastral agencies before ALKIS into KML and JML. It delivers Python packages and XSL files.

Some utilities to help with the NMR processing for BGME lab

The EU Provenance project developed an architecture to document a data generating process in a distributed environment. The Python Client Side Library (CSL) enables the development of provenance-aware Python applications.

PyEsp - Enhanced/Evolving/Extensible Semantic Profiling. This Python program will sort and filter search results by applying semantic profiling on web pages. The program will learn the user preferences and profiling will be done on the client computer.

PyGraphMath is a system for the manipulation of symbolic and numerical expr., equations, vectors .. (Maxima). Main focus lies on direct 3D graphical viewport (openGL) which displays math objects. Syntax is "pseudo-python" and supports objects, loops .. *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** OBSOLETE: please use instead http://www.sagemath.org/ with PyODE (or pyphyssim/PPE) *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** ***

UPDATE: After some bug fixes, I've ditched Pysimony for Javamony: https://sourceforge.net/projects/javamony/ Given Python's beauty, I know that someday I will have to finish Pysimony. A student's first attempt at a phylogenetic inference program, written in the simplistic yet elegant Python. Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. An unlikely-to-be-the-most-parsimonious tree is printed upon completion in basic Newick tree format. As all parts of the program are the original work of a beginner programmer, this may represent one of the worst approaches to solving the phylogenetic problem. I have clearly avoided object-oriented programming. Nevertheless, I distribute this imagining it might someday be slightly educational or at least provide a laugh at the pathetic attempt it makes to reinvent the wheel

ReliaFree is a Python and PyGTK based suite of tools to assist in Reliability, Availability, Maintainability, and Safety (RAMS) analyses. ReliaFree is intended to be an Open Source alternative to proprietary RAMS analyses solutions.

This is a set of Python classes that can be used to simulate dynamic multi-body systems. It used to be a project for studies. Now it is not being worked on anymore, but it is completely GPLized.

Zherlock has now changed name to SciCraft and no longer hosted on sourceforge. Visit our new site at http://www.scicraft.org

BESTGUI is a GUI front-end for BEST written in Python and GTK+. BEST (Basic Envisat SAR Toolbox) is an ESA (European Space Agency) software tool designed to facilitate the use of ESA SAR data.

boost_graph tried to wrap the C++ Boost Graph library in Python, providing graph algorithms like Breadth First Search, DFS, Shortest Path, Topological sort. This project is dead (http://bayleshanks.com/pamv1)

defunct

defunct

User friendly interface for calculating electronic properties in graphene-like ribbons. The programs uses the tight binding approximation and mean field Hubbard model to predict electronic properties of graphene-like nanoribbons. See Discussion to ask questions or details Update: New versions of this program will be known as quantum-honeycomp

NESSY is an open source software to analyse NMR relaxation dispersion data of either CPMG or R1p (R1rho) dispersion experiments. The graphical interface enables simple management of large experimental data sets and simple and automated analysis. NESSY automatically calculates effective transverse relaxation rate (R2eff) and performs model selection between different relaxation dispersion models.

prefix is a command line prefix calculator written in python. It supports basic math functions (add, subtract, multiply, divide) as well as some more advanced (exponents, logarithms, etc.)

Perform local clustering on vector data. Alternatively: psi_square, psisquare

pyRadar was a Python/pyGTK program that retrieves and displays radar images from the NOAA's NEXRAD radar stations. pyRadar is no longer being actively developed due to changes in NOAA's systems. Thank you to everyone who downloaded pyRadar.