Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
omiccircos
•
reset
0
votes
0
replies
850
views
Question about OmicCircos
OmicCircos
7.4 years ago
ch8316f5eyu
• 0
0
votes
0
replies
1.3k
views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
8.0 years ago
mictadlo
▴ 10
0
votes
0
replies
1.2k
views
Omiccircos: how to draw a circos plot for non-model organisms
omiccircos
seganglepo
sim.circos
circos
8.0 years ago
Didi
▴ 10
2
votes
3
replies
4.2k
views
Making a circos plot to show expression for a gene set rather than whole genome
Gene set
gene set analysis
omiccircos
updated 8.1 years ago by
yifangt
▴ 20 • written 10.7 years ago by
Peter.Wood
• 0
0
votes
0
replies
1.6k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
8.4 years ago
matthew.bashton
• 0
0
votes
1
reply
1.9k
views
Circos Tile colors
OmicCircos
RCircos
updated 8.4 years ago by
bernatgel
▴ 150 • written 8.4 years ago by
Radek
▴ 90
0
votes
1
reply
2.7k
views
OmicCircos - Error in 1:scale.n : NA/NaN argument
OmicCircos
8.5 years ago
Stefan Langenberg
• 0
0
votes
0
replies
1.3k
views
OmicCircos Error in Colnames attribute mus be the same length as the vector
r
omiccircos
8.6 years ago
theobroma22
▴ 10
0
votes
0
replies
1.5k
views
OmicCircos barplot height and scale
omiccircos
8.7 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
0
replies
984
views
OmicCircos for non human genomes
omiccircos
rnaseq
plants
8.7 years ago
Didi
▴ 10
0
votes
0
replies
1.1k
views
Zoom function in OmicCircos
OmicCircos
Zoom
8.7 years ago
abmora
• 0
0
votes
0
replies
1000
views
How to plot a single segment using OmicCircos?
omiccircos
9.1 years ago
Shambho
• 0
1
vote
0
replies
967
views
the 23re and 24th segs cannot be plotted
OmicCircos
9.2 years ago
magcj89
▴ 10
3
votes
2
replies
3.0k
views
How to represent a relationship between physical map and linkage map of a sequenced data using OmicCircos or another similar
omiccircos
software R
bioconductor for genomic data science
linkage disequilibrium
updated 9.5 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.5 years ago by
pertille
• 0
0
votes
0
replies
1.6k
views
Can OmicCircos handle chicken ChIA-PET interactome?
OmicCircos
chicken
9.7 years ago
Gary
▴ 20
0
votes
0
replies
1.8k
views
Circos Styling plots is now easy with canceR package
canceR
visualization
omiccircos
10.3 years ago
kmezhoud
▴ 10
0
votes
0
replies
1.5k
views
News:
OmicCircos was updated
visualization
omiccircos
News
10.5 years ago
Hu, Ying NIH/NCI [E]
▴ 50
1
vote
3
replies
1.8k
views
OmicCircos mapping data file.
omiccircos
updated 10.5 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.9 years ago by
abdul rawoof
▴ 60
0
votes
1
reply
2.0k
views
extdata missing for non-human OmicCircos plots?
OmicCircos
updated 10.5 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.9 years ago by
micahgearhart
• 0
0
votes
2
replies
2.4k
views
How to specifiy colors for polygon links when using circos function of OmicCircos package
graph
omiccircos
updated 10.6 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 10.6 years ago by
wei.shen
• 0
0
votes
1
reply
1.6k
views
Larger values masking others for OmicCircos heatmap
differential gene expression
heatmap
Circos
omiccircos
10.7 years ago
Peter.Wood
• 0
21 results • Page
1 of 1
Recent ...
Replies
Comment: Heatmap of the Count Matrix
by
ArnulfoByrd
• 0
Perhaps PCA loadings offer a more comprehensive perspective. Now, thinking back, I recall struggling with a similar data reduction dilemma …
Answer: readBam vs read_bam_insert_metrics
by
James W. MacDonald
68k
Depends on what you mean by input. If you mean to ask if you use `readBam` to generate something to use as an argument to `read_bam_insert_…
Answer: How to construct a BSgenome object from a custom genome assembly using BSgenomeF
by
James W. MacDonald
68k
There is an example in the help page for `forgeBSgenomePkgFromTwobitFile`. Have you tried emulating that?
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
What you describe sounds a good approach to me. I would also use sample weights (`sample.weights=TRUE` when running `voomLmFit`) and robust…
Comment: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg?
by
Michael Love
43k
I moved your post from an "answer" to a "comment". I don't know about `offst()` function, what is the scale or direction, or whether you a…
Votes
Answer: Limpa Pipeline Order
A: How barcode-plot enrichment is calculated?
A: How barcode-plot enrichment is calculated?
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Awards
• All
Popular Question
to
rtrivedi1
▴ 10
Popular Question
to
James W. MacDonald
68k
Popular Question
to
Assa Yeroslaviz
★ 1.5k
Popular Question
to
Nik dAK
▴ 10
Popular Question
to
Michael
• 0
Locations
• All
The city by the bay,
2 hours ago
Mexico,
5 hours ago
WEHI, Melbourne, Australia,
5 hours ago
United States,
7 hours ago
Spain,
10 hours ago
Traffic: 1003 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6