All Stories

  1. Beyond Detection: Comparative Explainability Study on Trypanosoma cruzi Using CAMs and DETR Attention

    Article • June 2025, Center for Open Science

    Megan Coffee

  2. Assessing ventilation through ambient carbon dioxide concentrations across multiple healthcare levels in Ghana

    Article • PLOS Global Public Health, August 2024, PLOS

    Megan Coffee

  3. The impact of anthropogenic climate change on pediatric viral diseases

    Article • Pediatric Research, December 2023, Springer Science + Business Media

    Megan Coffee

  4. Lessons Learned from Assessing Trustworthy AI in Practice

    Article • Digital Society, September 2023, Springer Science + Business Media

    Megan Coffee

  5. Vitasd: Robust Vision Transformer Baselines for Autism Spectrum Disorder Facial Diagnosis

    Article • June 2023, Institute of Electrical & Electronics Engineers (IEEE)

    Megan Coffee

  6. Assessing Trustworthy AI in Times of COVID-19: Deep Learning for Predicting a Multiregional Score Conveying the Degree of Lung Compromise in COVID-19 Patients

    Article • IEEE Transactions on Technology and Society, December 2022, Institute of Electrical & Electronics Engineers (IEEE)

    Megan Coffee, Jarno Tuominen

  7. Exploring Coronavirus Disease 2019 Vaccine Hesitancy on Twitter Using Sentiment Analysis and Natural Language Processing Algorithms

    Article • Clinical Infectious Diseases, May 2022, Oxford University Press (OUP)

    Megan Coffee

  8. To explain or not to explain?—Artificial intelligence explainability in clinical decision support systems

    Article • PLOS Digital Health, February 2022, PLOS

    Megan Coffee

  9. Improving Tuberculosis (TB) Prediction using Synthetically Generated Computed Tomography (CT) Images

    Article • October 2021, Institute of Electrical & Electronics Engineers (IEEE)

    Megan Coffee

  10. Co-Design of a Trustworthy AI System in Healthcare: Deep Learning Based Skin Lesion Classifier

    Article • Frontiers in Human Dynamics, July 2021, Frontiers

    Megan Coffee

  11. On Assessing Trustworthy AI in Healthcare. Machine Learning as a Supportive Tool to Recognize Cardiac Arrest in Emergency Calls

    Article • Frontiers in Human Dynamics, July 2021, Frontiers

    Megan Coffee

  12. COVID-19 early-alert signals using human behavior alternative data

    Article • Social Network Analysis and Mining, February 2021, Springer Science + Business Media

    Megan Coffee

  13. Comorbidity and clinical factors associated with COVID-19 critical illness and mortality at a large public hospital in New York City in the early phase of the pandemic (March-April 2020)

    Article • PLOS One, November 2020, PLOS

    Megan Coffee

  14. The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment

    Article • Journal of the American Medical Informatics Association, August 2020, Oxford University Press (OUP)

    Megan Coffee, Professor Casey Greene

  15. Déjà vu: Stimulating open drug discovery for SARS-CoV-2

    Article • Drug Discovery Today, May 2020, Elsevier

    Megan Coffee, Dr Christopher Southan

  16. Towards an Artificial Intelligence Framework for Data-Driven Prediction of Coronavirus Clinical Severity

    Article • Computers Materials & Continua, January 2020, Computers, Materials and Continua (Tech Science Press)

    Megan Coffee

  17. Case Report: A Cluster of Three Leptospirosis Cases in a New York City Abattoir and an Unusual Complication in the Index Case

    Article • American Journal of Tropical Medicine and Hygiene, December 2017, American Society of Tropical Medicine and Hygiene

    Megan Coffee

  18. Use of a community-led prevention strategy to enhance behavioral changes towards Ebola virus disease prevention: a qualitative case study in Western Côte d’Ivoire

    Article • Global Health Research and Policy, December 2017, Springer Science + Business Media

    Megan Coffee

  19. Illustrating and homology modeling the proteins of the Zika virus

    Article • F1000Research, September 2016, Faculty of 1000, Ltd.

    Dr Sean Ekins, Dr Christopher Southan, Megan Coffee

  20. Modeling the proteins in the Zika virus

    Article • F1000Research, March 2016, Faculty of 1000, Ltd.

    Dr Sean Ekins, Dr Rachelle J Bienstock, Dr Carolina Horta Andrade, Dr Christopher Southan, Megan Coffee

  21. Can Open Drug Discovery efforts contribute to a cure for the Zika Virus?

    Article • F1000Research, February 2016, Faculty of 1000, Ltd.

    Dr Antony John Williams, Dr Sean Ekins, Dr Carolina Horta Andrade, Megan Coffee

  22. Prognostic Indicators for Ebola Patient Survival

    Article • Emerging Infectious Diseases, February 2016, Centers for Disease Control and Prevention (CDC)

    Megan Coffee

  23. Addressing the next viral outbreak

    Article • F1000Research, July 2015, Faculty of 1000, Ltd.

    Dr Sean Ekins, Dr Christopher Southan, Megan Coffee

  24. Repurposing Approved drugs for Ebola

    Article • F1000Research, March 2015, F1000Research

    Dr Sean Ekins, Megan Coffee

  25. How do we fight the next pathogen we discover?

    Article • F1000Research, February 2015, Faculty of 1000, Ltd.

    Dr Sean Ekins, Dr Christopher Southan, Megan Coffee

  26. drugs for Ebola

    Article • F1000Research, February 2015, Faculty of 1000, Ltd.

    Dr Sean Ekins, Megan Coffee

  27. pharmacophore for compounds active against Ebola

    Article • F1000Research, December 2014, F1000Research

    Dr Sean Ekins, Megan Coffee

  28. pharmacophore for compounds active against Ebola

    Article • F1000Research, November 2014, Faculty of 1000, Ltd.

    Dr Sean Ekins, Megan Coffee

  29. Effect of the One-Child Policy on Influenza Transmission in China: A Stochastic Transmission Model

    Article • PLOS One, February 2014, PLOS

    Megan Coffee

  30. HIV andSchistosoma haematobiumprevalences correlate in sub-Saharan Africa

    Article • Tropical Medicine & International Health, August 2013, Wiley

    Megan Coffee

  31. Modelling the impact of migration on the HIV epidemic in South Africa

    Article • AIDS, January 2007, Wolters Kluwer Health

    Megan Coffee

  32. Dynamically Modeling SARS and Other Newly Emerging Respiratory Illnesses

    Article • Epidemiology, November 2005, Wolters Kluwer Health

    Megan Coffee

  33. Patterns of Movement and Risk of HIV Infection in Rural Zimbabwe

    Article • The Journal of Infectious Diseases, February 2005, Oxford University Press (OUP)

    Megan Coffee

  34. In Vivo Radioprotective Effects of Angiogenic Growth Factors on the Small Bowel of C3H Mice

    Article • Radiation Research, August 1998, JSTOR

    Megan Coffee