Panicum virgatum (switchgrass): 120706723
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Entry
120706723 CDS
T07260
Name
(RefSeq) dual specificity protein phosphatase PHS1-like isoform X1
KO
K14165
atypical dual specificity phosphatase [EC:
3.1.3.16
3.1.3.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120706723
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120706723
3.1.3.48 protein-tyrosine-phosphatase
120706723
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Atypical DSPs
120706723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Act-Frag_cataly
DSPc
PTP-SAK
Tc-R-P
Y_phosphatase2
Init_tRNA_PT
Y_phosphatase
Zn_SUZ12
zf-BED
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120706723
NCBI-ProteinID:
XP_039847365
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Position
5K:17498941..17505901
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AA seq
926 aa
AA seq
DB search
MEDREATQPEEAAAEALGQEQPSSIPPKGNEDRDLKLSSRVVSLLFGGDISTPAQTFEKW
LSLVRKRSGAFRPSGFPHRGSRIEVMPSGSFSLFGSGDLSEHLVREEPVGKDPSTCDQPS
EISLWERLGNASTLDIESSEFSWDVLSSLHHTEHSSGSELSEDEMNKALEVTVNSGGVVF
FALFGSSGNCEITEEAAAVIKFSSSKMATQAERLGYEFARLLGVQTPQARVVYNSSPEWQ
GIKHAAENARAVAVSNNDEVGEMTCSELLEALELSRCLLLMSYIHGSPLLESSKAFTSRE
AACVTASSLGRVLMLDLILRNEDRLPCRQLGWRGNPANLMVSDRSSSPNVDRLQDCKSTT
QSSNQLLTKVLLREKRSHSVNGRFDSMELDPMSQKVEAFKSERENTESTNDTFHIVAIDT
GVPRRPPAGRRIKDHERYPKVVELILNSSDYSASILYEISGGKLGHPGPDEVTSTDSCLS
LSDEDNAVAIHEFRGSFRAALRDLEGFHLFLLQLYQKLDGLLRLFLSIITKSSEESDNND
SVLLDFPSPGASYSTPSKQVNNEPPSDSEMLKSTTKSSSAGSRGSTDSASPLSRDSWSNK
YFKGSAEAPRNLRMTMKLRDFYKNPKVDPELLKEIEQWNEALKTDVIKFCQENNFHSGFF
DGTENNMVADAYELKVRLEHIIERIALISDAANTERPSLVVNNLFIGGALAARSKYTLQH
LGITHVLCLCSNEIGQSDSQFPDLFEYKNFSISDDDDANISDLFEEASDFIDHVNHVGGK
VLVHCFEGKSRSATVVLAFLMLRMGFTLAKAWNLLKKVHRRAQPNDGFAKALLALDKKLH
GKVSMDWQHKRPEMKVCPICSKNVGLSTSSLKLHLQKAHKRLSAGSVDSAMTMEIQKSIE
SLRISRGGSLSPSQKLTKAFADELSF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcgggaggcgacgcagccagaggaggcggcggcggaggcgctcggccaagag
cagccctcctccattcctcccaagggaaacgaggatagagatctgaagctatcctctcga
gtggtttctttattatttggtggtgatatatccacaccagcacaaacatttgagaaatgg
ctgtcattagtacgtaagaggagtggggcattccggccatccgggttcccgcatcggggt
tcaaggattgaagtcatgccaagtggaagcttctcactatttggtagtggggacttaagt
gagcatttggttagagaagaaccagtagggaaagatccatcgacttgcgaccaaccttct
gaaataagcttgtgggagagacttgggaatgcttcaacactagacattgagtcatctgag
ttttcatgggacgtcttgtcgtctctgcatcatacagaacatagtagtggttcggaacta
tctgaagatgaaatgaacaaagctctcgaggtgactgtaaactctggtggtgtagtgttc
tttgcactatttggttcttcgggtaactgtgaaataactgaagaggcagcagctgttata
aagttctcgtcatcaaagatggcaacacaggcagaacgtttgggttatgaatttgcaaga
ttacttggagtccagacaccacaagctagagtagtatacaattctagcccagagtggcag
gggatcaagcatgctgcagaaaatgcacgggcagtagccgtttcaaataatgatgaggtg
ggtgagatgacttgctcagagttgctggaagctcttgagctaagccgctgccttcttcta
atgagttatattcatggctccccactacttgagagttcaaaggcattcacttcgcgagaa
gctgcttgtgttactgcttcatccctgggaagggttttaatgcttgatctgatactccgg
aacgaggacagactcccatgccgtcagcttggttggcgtggtaatcctgcaaatctgatg
gtttcggatagatcatcgtcacccaatgtggatagattgcaagattgcaagagcaccaca
caaagctccaatcaactgcttacaaaagttttgcttagagagaagcgatctcactctgtg
aatggaaggttcgattctatggaattggatcccatgtcacaaaaagtagaagcattcaag
agtgaacgagaaaatactgaaagtacaaatgacacttttcacattgtagcaattgacact
ggtgttccccgtcgcccccctgcagggcgacgtatcaaagatcatgagaggtatcccaaa
gttgtggagctcattttgaatagctcagactattccgcaagtatcctgtatgaaatttca
ggtggtaagcttgggcatccaggacctgatgaggttacttccactgattcatgtttatcc
ctttccgatgaagacaatgctgtagcgattcatgaattccgaggatcatttcgtgcagct
ctaagggatctggaggggttccatctatttcttctccagctttaccaaaaactggatggc
ctgttgcgactttttttgtccataattactaagagctctgaagaatctgacaataatgat
tcggtactattggattttccttcgcctggagccagctatagtactcctagtaagcaagtg
aacaatgaaccgccaagtgattccgaaatgctgaaatccacaacaaagtcctcttctgcg
ggatcccgcggaagcacagattcagcttctcctctatccagggacagttggagcaacaaa
tacttcaagggaagtgccgaggctcctcgaaatttaaggatgacaatgaaacttcgtgat
ttttacaagaacccaaaggttgatcctgaattgctcaaagagattgagcagtggaatgaa
gcactgaagaccgatgtgatcaaattttgtcaggagaacaattttcattctggcttcttt
gatggaactgaaaacaacatggtagctgatgcctatgaattgaaggtgcgtcttgaacac
atcatagaaaggatagccttgatctccgatgctgccaatacagagcgaccttctcttgtt
gtcaacaaccttttcataggtggggctttggcagcaaggtctaagtatactcttcagcat
ttgggcattacccatgtactatgtttgtgttcgaatgagattggtcaatctgattcccaa
tttcctgatctttttgaatacaagaacttttcaataagtgacgatgatgatgcaaacatc
agtgatctttttgaggaagcatcagattttattgatcatgtaaatcatgtcggaggtaag
gttctggttcattgctttgagggaaaaagtaggagcgcaacagttgtccttgccttcctg
atgcttagaatgggcttcactcttgcaaaagcctggaatttactgaagaaggtgcatcgt
cgagcacagccgaacgacggtttcgccaaggctctgctggccctagacaagaagcttcac
ggcaaggtgtccatggactggcagcacaagcggcctgaaatgaaggtgtgccctatctgc
agcaagaatgttgggctaagcacgagctcgctaaagctgcacctgcagaaggcgcacaag
cggctttccgcaggcagtgtcgacagcgccatgaccatggagatccagaagtcgatcgag
tcgctccggatcagccgcggagggagcctgagcccgtctcagaagctgaccaaggctttc
gccgatgagctgagcttctga
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