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ERROR: segmentationPSCBS requires the PSCBS package

Status: Open.

#392 In lima1/PureCN;

· ntran95 opened on Jul 10, 2025

Error: CollapsedVCF superclass ExpData not defined in PureCN

Status: Open.

#391 In lima1/PureCN;

· MaxSimonNm opened on May 6, 2025

COMSIC VCF

bug

Status: Open.

#380 In lima1/PureCN;

· atimms opened on Jan 10, 2025

Interpreting results

Status: Open.

#377 In lima1/PureCN;

· MaryGoAround opened on Oct 11, 2024

An unknown error happening

Status: Open.

#376 In lima1/PureCN;

· MaryGoAround opened on Oct 2, 2024

No off-target

Status: Open.

#375 In lima1/PureCN;

· El84Ja opened on Sep 6, 2024

A high duplication rate for WGS

Status: Open.

#372 In lima1/PureCN;

· MaryGoAround opened on Aug 7, 2024

PureCN unintentionally filters out reads with supplementary alignments

Status: Open.

#371 In lima1/PureCN;

· tinyheero opened on Aug 6, 2024

Question regrading the results

Status: Open.

#368 In lima1/PureCN;

· maxanes opened on May 15, 2024

allelic copy number for segments

Status: Open.

#364 In lima1/PureCN;

· jennyp76 opened on Apr 13, 2024

WARN [2024-03-12 11:57:13] Could not find valid purity and ploidy solution. Error in results[[1]] : subscript out of bounds

Status: Open.

#358 In lima1/PureCN;

· gagank4911 opened on Mar 12, 2024

Could not find valid purity and ploidy solution

Status: Open.

#355 In lima1/PureCN;

· gagank4911 opened on Mar 7, 2024