Showing : basilisk • reset
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Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion
basilisk
updated 8 months ago by ★ 4.9k • written 8 months ago by ▴ 40
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error with spatialDE::run() and basilisk i/f
basilisk spatialDE
updated 16 months ago by 68k • written 16 months ago by ★ 3.4k
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Comment: Applying lmFit(), eBayes() and topTable() for modeling associations between NMR- by Gordon Smyth 52k
> How do these logFC values compare to standard effect sizes derived using a basic regression model like lm()? Exactly the same. Both soft…
Comment: Applying lmFit(), eBayes() and topTable() for modeling associations between NMR- by anni • 0
Ok, thanks! I have just a couple more questions: 1. Based on the [limma User's Guide][1], for binary predictors like overweight, I have i…
Comment: Online workshop "Working with ChatGPT in R" 2023-03-09 by tnaru607 • 0
Thanks for sharing your workflow and benchmarking approach - very informative! I've been experimenting with AI-assisted tools recently, es…
Comment: minfi latest update for EPIC V2 chip by UlyssesHenson • 0
These provide updated manifests and annotations aligned with the latest genome build (hg38) and probe content for the EPIC V2 array. [itali…
Comment: Design Matrix with paired and independent samples plus RUVg Spike-in normalizati by Mei • 0
I have a similar experiment with 7 paired samples (T0 and T1) in each of 4 outcome groups. I am using RUVr combined with limma-voom, so I …
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I would like to perform differential expression analysis of lncRNAs using DESeq2 and edgeR.
Answer: ExperimentHub full metadata
Answer: AnnotationHub/ExperimentHub resources backup
Answer: ExperimentHub full metadata
A: dba.count Can't count: some peaksets are not associated with a .bam file.
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