Bioconductor Cnvpanelizer

Showing : cnvpanelizer • reset

0

votes

1

reply

1.1k

views

CNVPanelizer failed to open BamFile failed to load BAM index file

7.9 years ago sbpatel2009 • 0

1 result • Page 1 of 1

Recent ...

Replies

Comment: Bioconductor Board Nominations Open by SprunkiRetake • 0

Being part of a community like Bioconductor has shown me how powerful collaboration and shared vision can be just like playing [Sprunki Ret…

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs. ``` # Checking SC in …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by James W. MacDonald 68k

Apparently it's been over-ridden by a different UniProtKB ID ``` > select(org.Ss.eg.db, "MYH11", "UNIPROT", "SYMBOL") 'select()' retu…

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by James W. MacDonald 68k

Your approach 1 is a bad idea. Subtracting the gene counts won't do what you want to do. I would personally check to see if there is any…

Comment: Can NanoString data be analyzed using DESeq2? by James W. MacDonald 68k

You can always discard, although you can also retain them to check for unexpected differences.

Votes

Can NanoString data be analyzed using DESeq2?

Awards • All

Popular Question to Dario Strbenac ★ 1.6k