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Comment: blockwiseModule crashes in the end and doesn't generate modules
by
quordle
• 0
your blockwiseModules crash reminds me of [quordle puzzles][1] looks fine until the last block throws a twist. the error seems tied to a fu…
Comment: Non-monotonic voomByGroup plot in Xenium data
by
richardallenfriedmanbrooklyn
▴ 30
Thank you. I willleave as is and proceed.
Answer: Non-monotonic voomByGroup plot in Xenium data
by
Gordon Smyth
52k
It doesn't look like a problem to me, because the increase in the trend at low expression levels is very slight. If you don't like it thoug…
Comment: competitive enrichment test yields too few significant results, self-contained t
by
bbao
▴ 10
Thanks ATpoint, I will keep this in mind!
Answer: cytolib uses outdated boost call
by
James W. MacDonald
68k
Your version of R is old, as is your Bioconductor install. We do not support old versions of packages, so please upgrade to R-4.5.1 and re-…
Votes
Answer: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
Answer: Non-monotonic voomByGroup plot in Xenium data
Comment: competitive enrichment test yields too few significant results, self-contained t
Comment: competitive enrichment test yields too few significant results, self-contained t
Answer: Should Xenium pseudobulk experiments be analysed like microarrays (limma) or lik
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