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Comment: competitive enrichment test yields too few significant results, self-contained t by sophiasteck007 • 0

Thank you for the help

Comment: competitive enrichment test yields too few significant results, self-contained t by bbao ▴ 10

Hi Gordon, Thanks for the advice, I gave camera a try, and it yielded around ~1,000 statistically significant gene sets from the same 11,0…

Answer: competitive enrichment test yields too few significant results, self-contained t by Gordon Smyth 52k

Actually, preranked GSEA is known to be highly anti-conservative, because it ignores inter-gene correlations, and can give significant resu…

Comment: competitive enrichment test yields too few significant results, self-contained t by ATpoint ★ 4.9k

Lets see your code. 8000 significant genesets indicate a flaw somewhere.

Comment: Install old version of DESeq2 by James W. MacDonald 68k

To add to what Lori asks, this builds for me, using Dockerhub on Windows: ``` C:\Users\jmacdon\Desktop>docker build . [+] Building 477.7s …

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