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GenomeNet Database Resources

KEGG: Kyoto Encyclopedia of Genes and Genomes
   KEGG - Top page
   KEGG2 - Table of contents
   KEGG Atlas - Global maps interface
   KEGG PATHWAY - Systems information: pathways
   KEGG BRITE - Systems information: ontologies
   KEGG GENES - Genomic information
   KEGG LIGAND - Chemical information
   KEGG Organisms - Organism-specific entry points
   KEGG DISEASE - Disease information resource
   KEGG DRUG - Drug information resource
   KEGG GLYCAN - Glycan information resource
DBGET: Integrated Database Retrieval System
   DBGET search
   LinkDB search
Community Databases
   CYORF - Cyanobacteria annotation database
   BSORF - Bacillus subtilis genome database
   EXPRESSION - Gene expression profile database

GenomeNet Bioinformatics Tools

Sequence Analysis
   BLAST / FASTA - Sequence similarity search
   MOTIF - Sequence motif search
   CLUSTALW / MAFFT / PRRN - Multiple alignment
Genome Analysis
   KAAS - KEGG automatic annotation server
   EGassembler - EST consensus contigs
   GENIES - Gene network prediction
   GECS - Gene expression to chemical structure
Chemical Analysis
   SIMCOMP - Chemical structure search
   KCaM - Glycan structure search
   e-zyme - Reaction prediction


KEGG Update Notes
KEGG Organisms
KEGG Organisms in the Taxonomy

KEGG Atlas Metabolism map
KEGG Atlas Cancer map

Features of DBGET search
1."All databases" search option
2.Combination of brite search and bfind search
3.Direct links to original sites
4.Direct program links by Java Web Start
5.Over 500 databases in LinkDB

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Kyoto University Bioinformatics Center