Ribeiro Souza, Et Al 2024
Ribeiro Souza, Et Al 2024
Brazil
c Spatial Ecology and Conservation Laboratory (LEEC), Programa de Pós Graduação em Ecologia, Evolução e Biodiversidade, Departamento de
Biodiversidade, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Rio Claro, SP, 13506-900, Brazil
d Laboratório de Ecologia do Movimento, Instituto de Biociências, Departamento de Ecologia, Universidade de São Paulo (USP), São Paulo, SP, 05508-
090, Brazil
e Laboratório de Ecologia e Conservação (LAEC), Departamento de Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de
Keywords: Understand which factors influence the distribution of feline species can contribute to better
Atlantic forest planning of conservation strategies in a biodiversity hotspot. We modeled the potential distribu-
Biodiversity conservation tion of seven cat species occurring in the Atlantic Forest (AF). Here, we combined climatic and
Habitat loss landscape perspectives to determine the most suitable areas considering the taxonomic richness
Species distribution model
of these cats. We also assessed the ability of fully protected areas (FPAS) to protect these cat
Species richness
species. The results indicated that only 30% of the AF remnants are suitable for all species. Areas
with low species richness were located in Argentina and northeastern Brazil. For taxonomic rich-
ness, the Serra do Mar (45.89%) and the Araucaria (27.90%) sub-regions had the highest suitable
areas, followed by the Interior sub-region (21.89%). The Brejos Nordestinos and Pernambuco
sub-regions had less than 1% suitability. Considering taxonomic richness, only 9% of suitable ar-
eas are covered by FPAs. Leopardus emiliae (1.37%) and Panthera onca (1.97%) had the lowest val-
ues of suitable areas covered by FPAs. The other species of cats are also under low protection (L.
guttulus = 5.38%, L. wiedii = 5.71%, Herpailurus yagouaroundi = 6.70%, L. pardalis = 3.85%,
and Puma concolor = 4.94%). We reveal that a low percentage of suitable areas are currently
fully protected. This study also provides important conservation measures to be implemented in
different AF sub-regions. These findings may help in the planning, maintenance, and implemen-
tation of FPAs through restoration programs and the establishment of ecological corridors.
* Corresponding author. Postgraduate Program in Ecology and Natural Resources, Center of Biological and Health Sciences, Federal University of São Carlos
(UFSCar), São Carlos, SP, 13565-905, Brazil.
E-mail addresses: [email protected] (P. Ribeiro-Souza), [email protected] (J. Haji), [email protected] (J. Oshima), [email protected]
(F. Lima), [email protected] (B. Lima-Silva), [email protected] (J. Pires), [email protected] (M. Ribeiro),
[email protected] (M. Graipel).
1 PRS and JH should be considered joint first author.
https://doi.org/10.1016/j.rsase.2024.101155
Received 14 May 2023; Received in revised form 23 October 2023; Accepted 4 February 2024
Available online 15 February 2024
2352-9385/© 2024 Elsevier B.V. All rights reserved.
P. Ribeiro-Souza et al. Remote Sensing Applications: Society and Environment 34 (2024) 101155
1. Introduction
The Neotropics have a high degree of endemism and harbor the largest remnants of natural areas on the planet (Loyola et al.,
2009), including some global biodiversity hotspots (Oliveira et al., 2016). Among these hotspots, the Atlantic Forest (hereafter AF)
has been the focus of many studies due to its high species richness, endemism, and degree of threat (Mittermeier et al., 2011; Joly et
al., 2014). Species extinction in the AF is directly related to forest loss, urban and agriculture expansion, climate change, and invasive
species (Bellard et al., 2014; Estrada et al., 2017; Bello et al., 2021). Currently, the AF has about 26% of the original forest cover and
highly isolated fragments (Rezende et al., 2018). Nevertheless, the AF harbors about 321 mammal species, including 89 endemic
species (Graipel et al., 2017).
Human-caused environmental disturbances are the primary pressures responsible for the loss of species, ecological functions, and
ecosystem services in the AF (Bogoni et al., 2018, 2022; Cruz et al., 2018; de Lima et al., 2020). These disturbances affect species rich-
ness, distribution and abundance, as well as interspecific interactions (Fahrig, 2003; Gutiérrez et al., 2019; Lewis et al., 2015). More-
over, biodiversity information remains scarce, outdated, or inaccurate for many regions in the AF, including protected areas (Oliveira
et al., 2017). These issues make it difficult to efficiently assess the conservation status of species, particularly carnivorous mammals
(Oliveira et al., 2016). Historically, carnivorous mammals have undergone extinctions or declines in distribution and abundance in
many regions due to habitat loss, forest fragmentation, and illegal hunting (Valenzuela-Galván et al., 2008; Ceballos et al., 2015). Ac-
cordingly, there is great concern about the conservation status of neotropical felines, which are responsible for the maintenance of im-
portant ecological processes and ecosystem functions in tropical forests (Portela and Dirzo, 2020).
Neotropical wild cats (hereafter ‘cats’) are top predators, and by controlling prey populations, they influence vegetation structure,
composition, and abundance, as well as ecological succession (Terborgh et al., 2001; Estes et al., 2011; Morgan et al., 2017). Further-
more, larger body mass felines (e.g., the puma and jaguar) are considered umbrella species in defining priority areas for biodiversity
conservation (Jenkins et al., 2013; Ray et al., 2013). Seven species of Neotropical cats (Felidae) occur in the AF (Nagy-Reis et al.,
2020; IUCN, 2022), all of which are experiencing reductions in range and population size (IUCN, 2022). Most conservation studies
conducted in the AF have focused on the jaguar (Panthera onca) and puma (Puma concolor), which are the largest cats (see Lyra-Jorge
et al., 2010; Morato et al., 2016). Therefore, small, cryptic cats, such as the southern tiger cat (Leopardus guttulus), the margay (Leopar-
dus wiedii), and the jaguarundi (Herpailurus yagouaroundi) remain poorly studied and lack information regarding their biology, ecol-
ogy, and conservation (Macdonald et al., 2010; Nagy-Reis et al., 2017; IUCN, 2022).
According to the “insurance hypothesis”, species richness across their range is an important factor influencing the proper function-
ing of ecosystems (Yachi and Loreau, 1999). Therefore, conservation efforts should consider species richness to establish priority ar-
eas for conservation (Ceballos and Ehrlich, 2006). Most studies on the effects of habitat loss and forest fragmentation on species rich-
ness in the AF have been conducted at small (local or regional) scales. These results have been constantly used to infer large-scale im-
pacts on biodiversity (Sobral-Souza et al., 2021). Recent publications of species occurrence databases make large-scale studies possi-
ble, thus contributing to fill these knowledge gaps. Species Distribution Modeling (SDM) has been widely used to predict the occur-
rence and areas of higher richness (Fuller et al., 2007; Santos et al., 2020; Sobral-Souza et al., 2021) and to identify priority areas for
conservation (Brooks et al., 2006; Oshima et al., 2021; Mittermeier et al., 2005; Ribeiro-Souza et al., 2022). In general, SDM relates
occurrence records with environmental variables to identify suitable areas that allow populations of a given species to persist (Elith
and Leathwick, 2009).
Here, we model the potential distribution of seven cat species in the AF using climatic and landscape variables. We also analyze
the suitable areas most likely to harbor the highest taxonomic richness of these species. Moreover, we quantified the proportion of
these areas covered by fully protected areas (FPAs). Lastly, based on these data, we suggest strategies for the conservation of cats in
the AF areas identified as priorities.
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Fig. 1. Atlantic Forest domain (Muylaert et al., 2018) and its biogeographic sub-regions (adapted from Silva and Casteleti, 2003).
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Table 1
Species studied, climatic and landscape variables names and description.
Variable Abbreviation
3. Modeling procedures
We separately developed landscape and climate-based SDMs for each species. To include the full climatic niche of the species, the
climatic models were generated for the entire Neotropical region following the delimitation proposed by Morrone (2014). After-
wards, they were clipped to fit the expanded limit of the AF in Brazil, Argentina, and Paraguay, as well as the landscape models
(Muylaert et al., 2018). We used the ensemble forecasting approach to test different methodologies on a set of predictions (Araújo and
New, 2007). To accomplish this, we employed three algorithms utilizing varying techniques: (i) machine learning method that esti-
mates species distributions by finding the maximum entropy distribution, MaxEnt (Phillips et al., 2006); (ii) random forest, an artifi-
cial intelligence method that combines predictive regression tree predictors (Breiman, 2001); and (iii) multiple discriminant analysis
(MDA) method, a classification based on multiple models (Hastie et al., 1994). We selected 1000 background points, 70% of occur-
rence data for training the algorithm and 30% for external testing, randomized 10 times to generate less biased models (k-folding
technique, k = 2). In the end, we obtained 30 climatic and 30 landscape models for each species (10 × 3 algorithms). The efficiency
of the models was evaluated using the True Skill Statistic (TSS) test (Allouche et al., 2006). The TSS test generates values between −1
and 1, with values closer to 1 indicating perfect agreement, and values of zero or less indicating a performance no better than random
(Allouche et al., 2006). The area under the ROC curve (AUC; Hanley and McNeil, 1982) values were also presented as an additional
assessment (Table 0.2). Models with AUC values > 0.90 are excellent; 0.80–0.90 are good; 0.70–0.80 are reasonable; 0.60–0.70 are
poor, and 0.50–0.60 are failing (Araujo et al., 2005). All models were run using the ‘sdm’ package (Naimi and Araújo, 2016) in the R
environment. From the generated models, we estimated the suitable areas for each species from a maximum decision threshold that
maximizes the sum of sensitivity and specificity (Max SSS) (Manel et al., 2001). This approach is one of the most recommended for
measuring the performance of SDMs (Liu et al., 2005, 2013; Shabani et al., 2018). Following the maximization of the sum of sensitiv-
ity-specificity, the higher the sensitivity, the lower the false absence rate, and the higher the specificity, the lower the false presence
rate. Thus, we selected areas with higher climate and landscape suitability as priorities for conservation. We then constructed binary
maps, in which 0 = areas with inadequate climate and landscape and 1 = areas with adequate climate and landscape.
Table 2
Species richness criteria for the EcoLand scatterplot categories.
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We calculated the areas predicted by the final taxonomic richness maps in km2, selecting only suitable areas for more than four
species. We also calculated the areas using the final EcoLand maps, considering only areas with high climatic and landscape suitabil-
ity for each species using QGIS. The calculations were then tabulated considering the total suitable area for taxonomic richness, val-
ues by AF sub-regions (Silva and Casteleti, 2003, Fig. 1), and FPAs. The following categories were included: Ia (Strict Nature Reserve),
Ib (Wilderness Area), II (National Park), and III (Monument or natural feature) (IUCN, 2001). Data on protected areas were obtained
from protectedPlanet (Juffe-Bignoli et al., 2014; https://www.protectedplanet.net/en).
4. Results
The potential species distribution models demonstrated performance with TSS ranging from 0.36 to 0.73 (climate) and 0.34 to
0.92 (landscape). Regarding our AUC results, we obtained models with reasonable performance for climate (AUC = 0.73) and land-
scape (AUC = 0.71) and good performance for climate (AUC = 0.82) and landscape (AUC = 0.89) (Table appendix A.2).
5. Discussion
In this study, we present SDMs of suitable areas predicted by climate and landscape for seven cat species in the AF. Our results
show that only ∼30% of the AF remnants are suitable for cat species. Furthermore, over 90% of suitable areas are located outside
FPAs and in small, isolated forest patches. These findings reinforce the impacts of habitat loss and fragmentation in the AF and high-
Fig. 2. Distribution of Neotropical cat richness in the Atlantic Forest according to climatic (left) and landscape (right) models. Observe a gradient from 0 to 7 represent-
ing the number of species.
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Fig. 3. Distribution of Neotropical cat richness in the Atlantic Forest according to the EcoLand model.
Table 3
Suitable areas and percentage predicted by the climate and landscape (EcoLand) for higher taxonomic richness (≥4 species) areas in the Atlantic Forest (AF). We
present the total suitable areas for each AF sub-region and the total suitable areas covered by fully protected areas (FPAs).
2 2
km % km %
light their negative effects on the conservation of wild cats in this ecoregion. Based on our findings, we classify regions with different
suitability levels and suggest punctual and essential measures. Our results address several goals of the National Action Plan for the
Conservation of Small Cats (NAP Small Cats) and the National Action Plan for the Conservation of Big Cats (NAP Big Cats). Above all,
our results contribute to filling existing knowledge gaps in the AF by identifying potential habitats for forest-dependent cats based on
data compiled at the biome level and related to climatic and landscape variables. Thus, we provide new information that is essential
for decision-making regarding cat conservation.
Although higher resolution landscape data could provide a more detailed perspective of cat habitat suitability in our study, which
can be considered a limitation of it, the ocurrence data currently available for modeling the distribution of cats in the AF is not yet sys-
tematized along the entire biome. Therefore, higher resolution occurrence data and frequent monitoring will also be necessary for
more detailed predictions. To our knowledge, our predictions provide the best current overview of the status of suitable areas for
neotropical cats in the AF considering the datasets based on presence-only data.
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records of this species. Previous studies indicate that H. yagouaroundi is a habitat generalist and is associated with open areas (Caso et
al., 2015; Regolin et al., 2017), which may explain the lower performance of our landscape models. There are few records of the oc-
currence of H. yagouaroundi obtained using camera traps in open areas, especially due to the risk of loss of such equipment (Magioli et
al., 2022).
The wide geographic distribution may have influenced the lower TSS values for the climatic models of H. yagouaroundi, L. pardalis,
P. onca, and P. concolor. Since climatic variables influence the distribution of these species more strongly at first-order selection
(Johnson, 1980), landscape variables are essential to predict suitable remnant areas at finer, second-order levels. Our results uncover
climatically suitable areas for L. emiliae in the northern AF and L. guttulus in the southern AF (Figure appendix B.17 and Figure B.18,
respectively). These findings further support the definition of the two valid species, L. guttulus and L. tigrinus (Nascimento, 2010; Trigo
et al., 2013). The existence of large suitable fragments (in terms of climate and landscape) makes Serra do Mar a priority area for the
protection of Brazilian endangered species, such as L. guttulus and H. yagouaroundi.
For L. wiedii, we detected (as predicted by the landscape models) large continuous fragments in the Serra do Mar potentially suit-
able for the species (Figure appendix B.19). In contrast, these same fragments have low climatic suitability for the species, making it
necessary to monitor these areas under future climate change scenarios (Figure appendix B.5). For L. guttulus, our models suggest suit-
able areas more concentrated in the Serra do Mar and Araucaria (Figure appendix B.18). However, this species has already been
recorded in altered areas, as long as there was adjacent native vegetation that allowed its movement across the landscape (Oliveira-
Santos et al., 2012). In this case, an important conservation action could be to focus on forest restoration to increase the functional
connectivity between the forest fragments where the species still occur.
Although P. concolor occurs throughout most of South America and shows more generalist habitat selection, our models indicate
that suitable areas are limited to the large continuous fragments in the Serra do Mar and small portions in the Araucaria and Interior
sub-regions. The greater use of landscapes with forest cover was shown in another study carried out in the AF (Regolin et al., 2017). In
the Interior sub-region in southeastern Brazil, there is high climatic suitability for the species, but fragments with high landscape and
climatic suitability are smaller and far apart. In northeastern Brazil, the models for many regions indicate low climatic suitability, and
the remaining fragments (Bahia, Brejos Nordestinos, and Pernambuco sub-regions) with landscape suitability occurring close to the
coast (Figure appendix B.22).
Our model exhibits few suitable areas for L. emiliae predicted by climate and landscape (Figure appendix B.17), thus requiring
greater attention for its conservation status. Leopardus pardalis is widely distributed throughout South America (except Chile), but our
models indicate a considerable reduction of areas that are originally suitable. The areas with high climatic and landscape suitability
for this species are located in the Serra do Mar, Araucaria, Bahia, and Interior sub-regions (Figure appendix B.21). Despite the reduc-
tion of originally suitable areas, our results show that L. pardalis is still the Neotropical cat with the largest suitable area (high climatic
and landscape suitability; area = 305,000 km2) in the AF (Table appendix A.3), which reinforces its important role as a mesopreda-
tor in this ecoregion (Moreno et al., 2006; Silva-Pereira et al., 2011).
Finally, our models for P. onca indicate a suitable area (high climatic and landscape suitability) of only 6546 km2 (Figure appendix
B.23). According to Paviolo et al. (2016), P. onca has lost about 85% of its habitat and has practically disappeared from northeastern,
southeastern, and southern Brazil (Sanderson et al., 2002; Tôrres et al., 2008). In addition to the great loss of suitable forest habitats,
the remaining areas are highly fragmented, reaching 93% loss of its connectivity, mainly in Brazil and Paraguay (Pardo et al., 2023).
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which also harbor Neotropical cat populations (Oliveira et al., 2016). The Brejos Nordestinos region has a relatively small area com-
pared to other sub-regions and a naturally dispersed distribution (Ribeiro et al., 2009), presenting mostly areas of low climatic and
landscape suitability, small remaining forest fragments, and few FPAs.
6. Conclusion
We show for the first time how integrated landscape and climatic models can be used to estimate habitat suitability and important
conservation areas for Neotropical cats in the AF. We reveal that only a low percentage of suitable areas are currently fully protected.
This study also provides important conservation guidelines based on suitability models for specific sub-regions in the AF that could be
used by stakeholders. These findings may help in planning the maintenance and implementation of FPAs through restoration pro-
grams and the establishment of ecological corridors in this decade. We also suggest that future conservation efforts could be focused
not only on the conservation of cat richness suitable areas but also on new modeling approaches considering the presence and poten-
tial distribution of prey, improving functional connectivity, and considering possible future climate and landscape change scenarios
to strengthen the knowledge about suitable areas in the AF.
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Funding
This work was supported by Fundação Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES (process
#88887.519051/2020-00), Conselho Nacional de Desenvolvimento Científico e Tecnológico - CNPq (process #130769/2021-5;
#442147/2020-1; #440145/2022-8; #402765/2021-4; #313016/2021-6 and #440145/2022-8; 420094/2023-7) and Fundação de
Amparo à Pesquisa do Estado de São Paulo - FAPESP (processes #2013/50421-2; #2020/01779-5; #2021/06668-0; #2021/08322-3;
#2021/08534-0; #2021/10195-0; #2021/10639-5; #2022/10760-1; #2014/23132-2 and #2021/02132-8). This study is also part
of the Centro de Pesquisa em Dinâmica da Biodiversidade e Mudanças Climáticas, which is financed by the FAPESP.
Ethical statement
All authors declare that all ethical practices have been followed in relation to the development, writing, and publication of the ar-
ticle.
Author contribution
Conceptualization: Paula Ribeiro-Souza, Júlio Haji, Julia Oshima, Fernando Lima, Milton Ribeiro, Maurício Graipel, Barbara
Lima-Silva and José Pires. Data curation: Paula Ribeiro-Souza and Júlio Haji. Formal analysis: Paula Ribeiro-Souza and Júlio Haji.
Funding acquisition: Paula Ribeiro-Souza, Júlio Haji and Milton Ribeiro. Investigation: Paula Ribeiro-Souza. Methodology: Paula
Ribeiro-Souza, Júlio Haji, Julia Oshima, Fernando Lima, Milton Ribeiro, Maurício Graipel, Barbara Lima-Silva and José Pires. Pro-
ject administration: Paula Ribeiro-Souza and Júlio Haji. Resources: Paula Ribeiro-Souza, Júlio Haji, Maurício Graipel and Milton
Ribeiro. Software: Paula Ribeiro-Souza. Supervision: Paula Ribeiro-Souza and Júlio Haji. Validation: Paula Ribeiro-Souza, Júlio
Haji, Julia Oshima, Fernando Lima, Milton Ribeiro, Maurício Graipel, Barbara Lima-Silva and José Pires. Visualization: Paula
Ribeiro-Souza, Júlio Haji, Julia Oshima, Fernando Lima, Milton Ribeiro, Maurício Graipel, Barbara Lima-Silva and José Pires. Writ-
ing – original draft: Paula Ribeiro-Souza and Júlio Haji. Writing – review & editing: Paula Ribeiro-Souza, Júlio Haji, Julia Os-
hima, Fernando Lima, Milton Ribeiro, Maurício Graipel, Barbara Lima-Silva and José Pires.
Data availability
We shared the link with the data in the revised version of the manuscript.
Acknowledgements
We thank all the researchers who contributed to the cat database we used for the analyses.
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