Pathogens 08 00145
Pathogens 08 00145
Article
Recombinant Newcastle Disease Virus (NDV)
Expressing Sigma C Protein of Avian Reovirus (ARV)
Protects against Both ARV and NDV in Chickens
Deep Prakash Saikia 1 , Kalpana Yadav 1 , Dinesh C. Pathak 1 , Narayan Ramamurthy 1 ,
Ajai Lawrence D’Silva 1 , Asok Kumar Marriappan 2 , Saravanan Ramakrishnan 3 ,
Vikram N. Vakharia 4 , Madhan Mohan Chellappa 1, * and Sohini Dey 1, *
1 Recombinant DNA Lab, Division of Veterinary Biotechnology, Indian Veterinary Research Institute,
Izatnagar, Bareilly 243 122, India
2 Avian Diseases Section, Division of Pathology, Indian Veterinary Research Institute, Izatnagar,
Bareilly 243 122, India
3 Immunology Section, Indian Veterinary Research Institute, Izatnagar, Bareilly 243 122, India
4 Institute of Marine & Environmental Technology, University of Maryland Baltimore County,
Baltimore, MD 21202, USA
* Correspondence: [email protected] (M.M.C.); [email protected] (S.D.)
Received: 31 July 2019; Accepted: 6 September 2019; Published: 10 September 2019
Abstract: Newcastle disease (ND) and avian reovirus (ARV) infections are a serious threat to the
poultry industry, which causes heavy economic losses. The mesogenic NDV strain R2B is commonly
used as a booster vaccine in many Asian countries to control the disease. In this seminal work,
a recombinant NDV strain R2B expressing the sigma C (σC) gene of ARV (rNDV-R2B-σC) was
generated by reverse genetics, characterized in vitro and tested as a bivalent vaccine candidate in
chickens. The recombinant rNDV-R2B-σC virus was attenuated as compared to the parent rNDV-R2B
virus as revealed by standard pathogenicity assays. The generated vaccine candidate, rNDV-R2B-σC,
could induce both humoral and cell mediated immune responses in birds and gave complete protection
against virulent NDV and ARV challenges. Post-challenge virus shedding analysis revealed a drastic
reduction in NDV shed, as compared to unvaccinated birds.
Keywords: newcastle disease virus; avian reovirus-σC protein; bivalent vaccine candidate; humoral
and cell mediated immune responses; protection efficacy
1. Introduction
Viral arthritis/tenosynovitis is an economically important, widespread disease that affects the
broiler breeders and flocks [1,2]. The disease is caused by avian reovirus (ARV), belonging to the
Orthoreovirus genus of the family Reovirdae. Besides arthritis/tenosynovitis, the virus shows other
clinical signs, causing gastroenteritis, hepatitis, myocarditis, malnutrition syndrome, chronic respiratory
disease and affecting the central nervous system [3–5].
Avian reovirus is an icosahedral, non-enveloped virus consisting of ten segmented,
double-stranded RNA genome. Based on their electrophoretic mobility, the ten segments comprise
three each of L-class (L1, L2 and L3), M-class (M1, M2 and M3) segments, and four S-class segments
(S1, S2, S3 and S4). The genome encodes eight structural proteins (λA, λB, λC, µA, µB, σA, σB and σC)
that are found in mature viruses and four non-structural proteins (µNS, P10, P17 and σNS) are only
induced in the infected cells [6]. The sigma C (σC) is a homotrimer protein located on the outer capsid
and is responsible for cell attachment and induction of neutralizing antibodies. The mutation in the S1
segment encoding σC is responsible for segment rearrangement resulting in genetic diversity among
reovirus [7].
The ARVs are relatively resistant outside the host and could be transmitted vertically without the
detectable seroconversion and remain undetectable in cloacal swabs. The main approach to control
the disease is by using live and inactivated vaccines, which provide maternally derived antibodies
(MDA) to the progeny for preventing vertical transmission and protecting the breeder flocks from
infection. Vaccination of the layer birds with a live vaccine in their early age, followed by vaccination
with an inactivated vaccine at 6-weeks of age and again before the onset of egg-laying helps in the
induction of high levels of MDA [2]. However, the currently available vaccines do not provide sufficient
protection [8]. The genetic and antigenic variations in field isolates may be the reason for failure.
Several companies are now developing autogenous vaccines generated from the locally prevalent
virus isolates but are deficient in producing memory B and T cell responses, mucosal immunity, and
long duration immunity. Attenuation of viruses can be a long-term process and costly. Moreover, live
reovirus vaccines in hens are not efficacious in boosting antibodies and may result in economic losses in
hens and their progeny [9], when compared to inactivated oil emulsion vaccines prior to the start of egg
production, which may be due to poor intestinal immunity (IgA) developed following vaccination at a
very young age [10]. Inactivated vaccine (S1133 strain) given to layer birds can reduce the occurrence of
lesions in the hock joints of chicks, following a challenge at day old age [11]. Inactivated ARV vaccines
are generally given in combination with other killed vaccines against Newcastle disease and egg drop
syndrome 1976 (EDS’76) to breeder birds. Generally, the inactivated vaccines work more effectively
if it is preceded by vaccination using a live vaccine [12,13]. Hence, strategies to generate newer
vaccines are needed to provide a broader spectrum of protection. Viral vectored vaccines could be an
alternate approach to control ARV infection. A number of attenuated poultry vaccine viruses, such as
Newcastle disease virus (NDV) [14–17], fowl pox virus (FPV) [18–20], adenovirus [21], herpesvirus
of turkeys (HVT) [22,23], infectious laryngotracheitis virus (ILTV) [24,25] and Marek’s disease virus
(MDV) [26–28] have been genetically modified in order to use them as vaccine vectors for developing
combinations of live attenuated vaccines for controlling the diseases of poultry. Among these viruses,
NDV is an attractive vaccine vector for both human and animal diseases. The genome of NDV can
be easily manipulated using reverse genetics technology [29–32] for developing live attenuated and
bivalent vaccines against economically important poultry diseases. The advantages of recombinant
viral vaccine over conventional vaccine would be the induction of both humoral and cell mediated
immune responses and, at the same time, it will not create any variant vaccines.
Newcastle disease (ND) is another economically important poultry disease causing huge losses
to the poultry industry. ND is caused by Newcastle disease virus (NDV) belonging to genus avian
orthoavulavirus 1 of family Paramyxoviridae. NDV strain R2B is used in India as a booster vaccination of
older birds (≥6 weeks of age). The R2B strain was originated while passaging Indian field isolates
in embryonated chicken eggs for 19 passages at the Indian Veterinary Research Institute, India [33].
The complete genotypic characterization of R2B has given new insights into the epidemiology of NDV
and revealed that it is a mesogenic strain, with a genome size of 15,186 nucleotides, having a polybasic
amino acid motif at its fusion protein cleavage site (FPCS), phenylalanine at amino acid position 117,
and belonging to genotype II of class II cluster of NDV phylogeny [34]. India is an endemic country for
both NDV and ARV, the present study was conducted to develop a live recombinant virus wherein, the
R2B strain of NDV could express the σC protein of ARV and the generated bivalent vaccine candidate
could be administered to 6–8 weeks old birds in order to induce protection against both NDV and ARV.
The bivalent vaccine can be used as a booster vaccination of breeding stock for protection against NDV
and ARV. To the best of our knowledge, a pioneer work has been conducted on Indian NDV R2B strain
expressing σC gene of virulent ARV isolate to protect the chickens against both virulent NDV and
ARV challenges.
Pathogens 2019, 8, 145 3 of 21
2. Results
Figure 1. Generation of a full-length infectious clone of NDV-R2B containing the σC gene of avian
reovirus. The σC gene cassette containing the NDV gene start and gene end signals was engineered to
be incorporated between the P and M genes of NDV-R2B genome flanked by the restriction enzymes
PacI and AvrII. A Kozak sequence was incorporated preceding the σC gene coding sequence and one
extra stop codon was artificially introduced at the end of σC coding sequence to maintain the “rule
of six”. P-UTR and M-UTR contains the regulatory sequences of NDV, whereas P-CDS and M-CDS
represent the complete ORF of P and M genes, respectively.
Figure 2. (A) immunofluorescence analysis of rNDV-R2B-σC virus expressing sigma C protein ×60.
(a) DAPI stained cells; (b) cells expressing NDV proteins (Anti-NDV/Alexa); (c) cells expressing σC
protein (Anti-ARV/FITC); (d) merged; (B) multistep growth kinetics of recombinant virus rNDV-R2B-σC
in Vero cells. Monolayer of Vero cells were infected with rNDV-R2B-σC virus at MOI of 0.01 and culture
supernatant was collected at every 12 h interval until 72 h, and viral titres were determined by limiting
dilution assay and calculated as TCID50 by the Reed and Muench method.
2.5. Evaluation of the Protective Efficacy of Various Recombinant Viruses against Virulent ARV and NDV
Challenges in Chickens
The immunogenicity and protective efficacy of the recombinant viruses generated in the laboratory,
namely, rNDV-R2B-FPCS [35], rNDV-R2B [16] and rNDV-R2B-σC, were evaluated in specific pathogen
free (SPF) chickens. The recombinant virus rNDV-R2B-FPCS and commercial LaSota strain virus
were used as primary vaccine candidates and rNDV-R2B and rNDV-R2B-σC were used as booster
candidates, as summarized in Figure 3 and Table 1.
Pathogens 2019, 8, 145 5 of 21
Figure 3. Schematic diagram showing the experimental design. NDV: Newcastle diseases virus,
ELISA: enzyme-linked immunosorbent assay, HI: haemagglutination inhibition test, LTT: lymphocyte
transformation test, dpc: days post challenge.
Table 1. Immunization protocol for evaluation of the protective efficacy of the recombinant virus as
a vaccine.
Age of Vaccination
Vaccination Dose Route
Groups (Day)
Primary Booster Primary Booster Primary Booster Primary Booster
100 µL 100 µL
1 rNDV-R2B-FPCS rNDV-R2B-σC 7 42 IO/IN IM
106 EID50 /mL 106 EID50 /mL
100 µL 100 µL
2 rNDV-R2B-FPCS rNDV-R2B 7 42 IO/IN IM
106 EID50 /mL 106 EID50 /mL
100 µL 100 µL
3 LaSota rNDV-R2B-σC 7 42 IO/IN IM
106 EID50 /mL 106 EID50 /mL
Avian Reovirus vaccine 0.5 mL
4 42 - - IM -
inactivated 106 TCID50 /mL
5 Control (PBS) Control (PBS) 7 42 100 µL 100 µL IO/IN IM
IO: intra oral; IN: intra nasal; IM: intra muscular.
Figure 4. Assessment of NDV and ARV specific serum antibodies in experimental chickens by ELISA
and HI. (A) birds of three groups were immunized at seven days of age with rNDV-R2B-FPCS and live
LaSota vaccine as a primary vaccine. The control group birds were injected with phosphate buffered
saline (PBS). Booster dose was given at 42 days of age with rNDV-R2B-σC and rNDV-R2B viruses to
the corresponding groups and the control group was again injected with PBS. Serum samples were
collected from the immunized and control group of birds at regular intervals and tested for NDV specific
antibodies. The antibody titres higher than 200 was considered positive for NDV specific antibody;
(B) one group was vaccinated with ARV inactivated vaccine at 6th week of age. Serum samples were
collected from the immunized and control group of birds at regular intervals and tested for anti- σC
antibody. The O.D. value > 0.1779 (mean O.D. of the control birds + 3 S.D.) were considered positive for
ARV antibodies. Bars (mean ± SE) indicate the representative data of a single experiment. Data with
different capital letters superscript indicates the time effect (p < 0.01) and small letters superscript
indicates the treatment effect (p < 0.05); (C) assessment of NDV specific serum antibodies in response to
vaccination as determined by an HI test. Serum samples were collected at 14,21,28,35,42,49 and 56 days
of age from all the birds. All HI titres were expressed as mean reciprocal log2 titre + SEM (standard
error of the mean) (n = 10). Statistical differences were calculated by one-way ANOVA with p < 0.01
and Waller–Duncan as a post hoc test.
Pathogens 2019, 8, 145 7 of 21
Figure 5. Assessment of antigen specific lymphocyte proliferative response in chickens at 49 and 56 days
of age. Chicken PBMCs from immunized and control groups (n = 6) were stimulated with (A) NDV
and (B) recombinant σC antigen expressed in E. coli. Bars (mean ± SE) indicate the representative data
of a single experiment. Lymphocyte proliferative response was measured and expressed as stimulation
index. Level not connected by same letter is significantly different (p < 0.05). (C) mRNA expression
of different cytokine genes in response to vaccination as assessed by quantitative real time PCR and
normalized to β-actin gene. Relative expression was determined by using the 2−∆∆Ct method and
relative fold change of each cytokine expression between vaccinated and control groups are presented.
All of the data are represented as mean value ± standard errors. Data with different small letter
superscript indicates the treatment effect (p < 0.05).
Pathogens 2019, 8, 145 9 of 21
Figure 6. Survival curve for birds immunized with recombinant and vaccine viruses. Birds were
challenged with 105 ELD50 /mL virulent NDV at 62 days of their age and survivability was assessed up
to 10 dpc. All of the control birds died by 4 dpc.
2.8. Pathogenicity of the Recombinant and Virulent Viruses in the Experimental Specific Pathogen
Free Chickens
The virus-induced clinical signs and pathological (gross as well as histopathological) changes
in the visceral organs were observed after a challenge with virulent NDV and ARV in the
experimental birds. The control birds challenged with virulent NDV showed typical symptoms
of the disease like inappetence, depression, ruffled feathers, greenish diarrhea, dyspnea, torticollis
and succumbed to NDV within 4 dpc. However, the birds vaccinated with LaSota/rNDV-R2B-σC,
rNDV-R2B-FPCS/rNDV-R2B-σC and rNDV-R2B-FPCS/rNDV-R2B viruses were completely protected
after virulent NDV challenge, indicating 100% immune protective efficacy of the recombinant viruses.
Pathogens 2019, 8, 145 10 of 21
Figure 7. Reduction of virus shed due to vaccination in comparison to unvaccinated control group.
(A) oropharyngeal and (B) cloacal swabs were collected on 2 and 4 dpc from all the birds for virus
isolation. By day 4, all the control birds died due to an NDV challenge, whereas the viral shed from all
the vaccinated groups reduced drastically by 4 dpc as compared to the control. Data with different
small letter superscript indicates the treatment effect (p < 0.01) and capital letter superscript indicates
the time effect (p < 0.01).
In the case of a virulent ARV challenge that was carried out using the VA-1 virus isolate, from a
chicken suffering from viral arthritis that belonged to the lineage 1 of ARV, the control birds (Figure 8a)
showed typical symptoms of ARV infection, such as swelling of hock joint, footpad and diarrhea.
However, the birds vaccinated with LaSota/rNDV-R2B-σC, rNDV-R2B-FPCS/rNDV-R2B-σC viruses
and ARV inactivated vaccine were apparently normal without any clinical symptoms (Figure 8b).
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Figure 8. Gross lesions in control and vaccinated birds at 10 days post ARV challenge. (a) control
birds had swelling and edema of footpads, swollen hock joints with edematous digital flexor tendons;
(b) vaccinated birds had apparently normal footpads and hock joints.
Histopathological changes in the visceral organs following virulent virus challenge were
studied separately for both NDV and ARV. In the case of virulent NDV challenge, the
histopathological changes were studied in the organs like caecal tonsils, spleen and bursa. The birds
vaccinated with rNDV-R2B-FPCS/rNDV-R2B-σC (Figure 9a), LaSota/rNDV-R2B-σC (Figure 9b) and
rNDV-R2B-FPCS/rNDV-R2B (Figure 9c) viruses showed normal histoarchitecture of lymphoid
aggregations in caecal tonsils with intact lining epithelium. However, in the unvaccinated control
birds, caecal tonsils revealed severe lymphoid depletion with necrosis of lymphoid follicles and
associated reticular cell hyperplasia. The lining epithelial cells were necrotic, and seen to be
detached and denuded into the lumen (Figure 9d). The spleen showed normal histoarchitecture
with mild lymphoid depletion in the periarteriolar lymphoid sheath (PALS) area in the birds
vaccinated with rNDV-R2B-FPCS/rNDV-R2B-σC (Figure 9e), LaSota/rNDV-R2B-σC (Figure 9f) and
rNDV-R2B-FPCS/rNDV-R2B (Figure 9g) viruses. In contrast to that, the spleen showed severe
lymphoid depletion and associated necrosis of lymphoid follicles in the PALS and lymphoid follicles
surrounding the penicillar arteries in the unvaccinated control birds. Moreover, severe hyperplasia
of reticular cells in the Schweigger–Seidel sheath (Figure 9h) was noticed. Bursa revealed normal
histoarchitecture with intact bursal follicles in cortex and medulla lined by plical epithelium in the
birds vaccinated with rNDV-R2B-FPCS/rNDV-R2B-σC viruses (Figure 9i); plical epithelial hyperplasia,
mild lymphoid depletion in the medulla and mild perifollicular edema in the group vaccinated
with LaSota/rNDV-R2B-σC viruses (Figure 9j); intact plical epithelium, mild lymphoid depletion in
the medulla and mild perifollicular edema in group (Figure 9k). However, bursa showed severe
plical epithelial hyperplasia, lymphoid depletion both in cortex and medulla, perifollicular edema,
mononuclear infiltration and severe necrosis of lymphoid follicles in the medulla, in the unvaccinated
control birds (Figure 9l).
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Figure 9. Histopathological changes in various organs following virulent NDV challenge (a–c) caecal
tonsil with normal histoarchitecture; (d) caecal tonsil with necrosis and lymphoid depletion; (e–g) normal
histoarchitecture of spleen; (h) spleen with follicular necrosis and lymphoid depletion; (i) bursa with
normal histoarchitecture; (j,k) section of bursa with mild lymphoid depletion and mild peri-follicular
edema; (l) bursa with severe lymphoid depletion both in the cortex and medulla with mononuclear
infiltration. Scale bar—100 µM. Normal histology of the organs is denoted by red arrows and
histopathological changes by black arrows.
Similarly, in the case of virulent ARV challenge, organs like footpad, spleen, caecal tonsils and
bursa were collected for histopathological study. The footpad of the unvaccinated control birds
showed hyperkeratosis in the epidermal area with necrotic lesions; dermis revealed severe necrosis,
fibrin exudation, edema and infiltration of mononuclear cells (Figure 10a). Birds vaccinated with
rNDV-R2B-FPCS/rNDV-R2B-σC showed mild hyperkeratosis in the epidermal area of footpad and
dermis revealed mild edema, lymphoid follicle formation with mild infiltration of mononuclear cells
(Figure 10b). Similarly, mild hyperkeratotic changes in the epidermis along with mild edema and
presence of few mononuclear cells in the interstitium of the dermis were seen in the birds vaccinated
with an ARV inactivated vaccine (Figure 10c). In the group vaccinated with LaSota/rNDV-R2B-σC,
footpad showed fibrin exudation along with edema and severe infiltration of mononuclear cells
(Figure 10d). In the unvaccinated control birds, the spleen showed multifocal areas of focal to
coalescing lymphoid depletion in both PALS and periellipsoidal lymphoid sheath (PELS). The red
pulp area was severely congested and there was hyperplasia of reticular cells in the Schweigger–Seidel
sheath (Figure 10e). In contrast, the spleen showed apparently normal histoarchitecture with a
normal distribution of lymphoid cell in the PALS and PELS area in the birds vaccinated with
rNDV-R2B-FPCS/rNDV-R2B-σC (Figure 10f) and ARV inactivated vaccine (Figure 10g). However, the
spleen showed mild lymphoid depletion in the birds vaccinated with LaSota/rNDV-R2B-σC viruses
(Figure 10h). The caecal tonsils showed severe lymphoid depletion with intact lining epithelium in the
unvaccinated control birds (Figure 10i). However, it showed normal histoarchitecture with lymphoid
cell accumulation and follicle formation with intact lining epithelium in the birds vaccinated with
rNDV-R2B-FPCS/rNDV-R2B-σC (Figure 10j) and LaSota/rNDV-R2B-σC viruses (Figure 10k). In the
birds vaccinated with ARV inactivated vaccine, the caecal tonsils showed lymphoid depletion and
severe necrosis of lymphoid follicles in the lamina propria and reticular cell hyperplasia with an
Pathogens 2019, 8, 145 13 of 21
incidence of necrosis of enterocytes lining the lymphoid follicles (Figure 10l). Bursa revealed moderate
to severe lymphoid depletion both in cortex and medulla with thinning of lymphoid cells in the cortex,
vacuolation in the medulla and mild perifollicular edema in the control birds (Figure 10m). In the
birds vaccinated with rNDV-R2B-FPCS/rNDV-R2B-σC (Figure 10n) and LaSota/rNDV-R2B-σC viruses
(Figure 10o), bursa showed mild lymphoid depletion both in cortex and medulla, thinning of lymphoid
cells present in the cortex, mild perifollicular edema and intact plical epithelium. The bursa of the
birds receiving the ARV inactivated vaccine showed moderate to severe lymphoid depletion both in
cortex and medulla, thinning of the cortex along with hyperplastic plical epithelium (Figure 10p).
Figure 10. Histopathological changes in various organs following virulent ARV challenge (a) the
footpad shows hyperkeratosis and necrotic lesions in epidermis and dermis; (b,c) footpad with mild
mononuclear cell infiltration; (d) fibrin exudation, edema and mononuclear cell infiltration in the
foot pad; (e) the spleen shows hyperplasia of reticular cells in Schweigger–Seidel sheath; (f,g) spleen
with normal histoarchitecture; (h) spleen with mild lymphoid depletion; (i) caecal tonsils show severe
lymphoid depletion; (j,l) caecal tonsils with normal histoarchitecture; (k) caecal tonsils show severe
necrosis of the lymphoid follicles; (m) bursa shows severe lymphoid depletion; (n,p) bursa shows mild
lymphoid depletion; (o) bursa shows moderate to severe lymphoid depletion. Scale bar—100 µM.
Normal histology of the organs is denoted by red arrows and histopathological changes by black arrows.
3. Discussion
In India and other endemic countries, infection with NDV is a perennial problem with outbreaks
occurring every year. Similarly, ARV infections are re-emerging under field conditions and cause
significant economic losses to the broiler industry as well as breeding stocks. In this context, the
development of a bivalent vaccine candidate that can afford significant protection against both of these
Pathogens 2019, 8, 145 14 of 21
viral infections gains utmost importance. The present work described here is a seminal work in the
development of a vaccine candidate on similar lines using the backbone of an Indian NDV mesogenic
vaccine strain R2B [16] and its modified version, with an altered FPCS [35] which can be used in
primary vaccination schedule. Biologically, the rNDV-R2B-FPCS virus had an MDT and ICPI values of
>168 h and 0.0 indicating a loss in virulence as compared to the parent NDV R2B virus. Furthermore,
back passage studies showed the virus to be safe in chickens less than six weeks of age as proven by
our earlier studies [35]. Recent outbreaks with ARV field isolates, due to considerable genetic and
antigenic variations, are the main causes of vaccination failure [36]. Usually, the breeder flocks are
vaccinated with live attenuated vaccine up to 12 weeks of age, followed by 2–3 vaccinations with
inactivated oil emulsion before laying. Thus, in endemic countries, it is a common practice towards
vaccination of breeder replacement chickens against economically important NDV and ARV.
The mesogenic NDV vaccine strain R2B that is used as a backbone in this study gives immunity
up to one year and is routinely used for booster vaccination in 6–8 week-old birds that are primed
with a lentogenic NDV strain. Thus, the primary aim of this study was to develop a bivalent vaccine
candidate against NDV and ARV by reverse genetics technology and evaluate its immunogenicity and
efficacy in chickens. The σC protein of ARV is the most immunogenic protein of ARV that induces
the production of neutralizing antibodies [37]. It can induce the production of antibodies to an extent
as produced by the whole virus [38]. In the present study, the ORF of σC gene was amplified from
an Indian ARV isolate that belongs to lineage 1 of ARV so as to generate sufficient immune response
against circulating ARVs in this geographical location. The σC gene cassette was inserted between the
P and M genes of the infectious clone of R2B, as this site for insertion of a gene into the NDV genome
was found to be optimal [39]. The rescued recombinant virus, rNDV-R2B-σC showed a slight reduction
in growth than the parent virus rNDV-R2B [16]. The MDT and ICPI values indicated that the rescued
recombinant virus, although mesogenic in nature, had a slight reduction in virulence due to insertion
of the foreign gene which exerts further attenuation of the virus [14].
In this study, both NDV and ARV specific immune responses, as well as the protective efficacy
of the rescued recombinant viruses were evaluated and compared with the commercially available
live NDV vaccine LaSota and ARV inactivated vaccine. The mesogenic vaccine strain R2B cannot be
given to chicks that are less than six weeks old due to the presence of the virulence amino acid motif
at the FPCS of the virus. To counteract this, the FPCS region of the virus was altered to generate a
recombinant R2B virus that can be used as a primary vaccine [35]. In the present study, this recombinant
virus, rNDV-R2B-FPCS, was used as a primary vaccine candidate so that both the primary and booster
vaccine candidates were from the same backbone. It is the booster virus vaccine backbone rNDV-R2B
that carried and delivered the σC gene of ARV.
Following vaccination, the recombinant NDV generated an effective humoral immune response
against ND and ARV infection. Protection against NDV is primarily by the humoral immune response,
as is evidenced by several earlier vaccine studies [17,40–42]. Moreover, the anti-σC antibody response
generated with the recombinant virus was comparable with the ARV inactivated vaccine.
The NDV specific stimulation indices obtained at 49 and 56 days of age indicated that the
recombinant viruses have more potential to activate the T-cell response in comparison to the commercial
live NDV vaccine. Furthermore, the expression level of IFN-γ was the highest among all the cytokines
studied, indicating the induction of greater Th1 associated responses against NDV and σC antigens of
the recombinant virus. In comparison to the IFN-γ, the IL-4 expression was lower, since IFN-γ helps in
the induction of Th-1 responses by inhibiting the Th-2 cytokine production [43]. Protection studies
carried on experimental birds showed that the recombinant virus induced 100% protection against a
virulent NDV challenge at 62 days of age. In contrast, all the birds from the control group died by 4 dpc.
The birds from other vaccinated groups were apparently healthy without any detectable symptoms
of NDV infection. In terms of ARV challenge, the birds vaccinated with recombinant rNDV-R2B-σC
virus had minimal gross and histopathological lesions as compared to unvaccinated control birds
Pathogens 2019, 8, 145 15 of 21
that showed typical histopathological changes in the tissues studied but survived following virulent
ARV challenge.
Post-challenge analysis of virus shedding showed that there was a drastic reduction in the
shedding of NDV due to the robust immune response generated by the R2B backbone in which the
altered FPCS was used for primary vaccination. In earlier studies, researchers have reported that
mutations introduced in the FPCS of velogenic and mesogenic strain make these viruses much safer to
use, with reduced virus shedding and increased immunogenicity [35,44–47]. Furthermore, no gross
pathological lesions and histopathological changes were observed in the vaccinated birds following
virulent NDV challenge. However, marked histopathological changes were observed in caecal tonsils,
spleen and bursa of the unvaccinated NDV challenged control birds. Similarly, histopathological
alterations were observed in footpad, spleen, caecal tonsils and bursa of the unvaccinated control birds
following virulent ARV challenge. In contrast, normal histoarchitecture was observed in the footpad,
spleen, caecal tonsils and bursa of the vaccinated birds.
In summary, we have generated an infectious cDNA clone of NDV strain R2B expressing the σC
gene of ARV (pNDV-R2B-σC) and successfully rescued the recombinant NDV-R2B-σC virus by reverse
genetics technology. The rescued recombinant virus on biological characterization indicated a reduction
in virulence with similar growth characteristics as compared to the parent virus. The recombinant
virus on usage as a bivalent vaccine candidate in six6- week-s old chickens induced both humoral
and cell mediated immune responses and afforded protection against NDV and ARV infections. This
capability gains importance in a scenario wherein ARV vaccination failures occurs in the field due to
incompatibility between the circulating strains of the virus and the vaccine virus. The generation of an
inactivated vaccine based on the existing viral strain of a geographical area takes much longer time
and effort than the present strategy in which the σC gene of the circulating strain of ARV is engineered
to be delivered by the NDV vector.
NDV P gene end and M gene start signals), 990 bp (ORF of the σC gene) and 499 bp (containing
NDV P gene end and M gene start signals) that were amplified with three sets of primers (P1/P2),
(P3/P4) and (P5/P6), respectively. Two restriction enzymes sites viz., PacI and AvrII were introduced
artificially into primers P1 and P6, respectively, for directional cloning. The pNDV-R2B was used as a
template for amplification of the fragments using primer pairs P1/P2 and P5/P6 respectively. Similarly,
the clone pσC was used as a template to amplify the second fragment by PCR. An additional stop
codon (TAA) was placed at the end of the gene to maintain the “rule of six”. The three overlapping
fragments were used as a template to assemble the σC gene cassette by PCR with primer pairs P1 and
P6. The generated gene cassette was cloned into cloning vector pCR2.1TOPO (Invitrogen, Carlsbard,
USA). The recombinant clone was confirmed by restriction enzyme digestion and sequencing and was
designated as pCR2.1TOPO-σC. The clone pCR2.1TOPO-σC was digested with restriction enzymes
PacI and AvrII and the resulting insert was sub-cloned into pNDV-R2B-FL between the intergenic region
of P and M genes at nucleotide position 3077 and 3568. The resulting recombinant clone was confirmed
by restriction enzyme digestion as well as by sequencing and was designated as pNDV-R2B-σC.
The recombinant NDV harbouring the σC gene was rescued by reverse genetics techniques [16].
Briefly, Vero cells were grown up to 80% confluence and transfected with the recombinant clone
pNDV-R2B-σC along with three support plasmids as per manufacturer’s instruction (Invitrogen, USA).
Before transfection, the culture medium was removed from the cells and the cells were incubated
with OptiMEM for 1 h at 37 ◦ C in a CO2 incubator. The recombinant plasmid pNDV-R2B-σC (5 µg)
together with support plasmids (2.5 µg pNP, 1.5 µg pP and 0.5 µg pL) were diluted in 500 µl of
the OptiMEM medium containing Lipofectamine 3000 reagent (Invitrogen, Carlsbard, USA) and
incubated at 37◦ C for 30 min. Following the incubation period, OptiMEM media was removed and
the lipofectamine-plasmid mixture was added gently onto the cells. One mL of OptiMEM media
was added to the cells and the cells were incubated at 37 ◦ C for 24 h. The transfection mixture was
removed after 24 h of incubation and M199 medium (Life Technologies, Grand Island, USA) was
added to the cells and was left undisturbed for 3 days. Following the incubation period, cells were
freeze-thawed three times and the culture supernatant was used for re-infection of healthy confluent
Vero cells. Monolayers of the cells were observed for the development of cytopathic effect under the
inverted microscope (Leica Microsystems, Wetzlar, Germany) and the same process was repeated for
10 times. After 10 passages in Vero cells, the culture supernatant was inoculated into 9–11 days old
embryonated SPF chicken eggs and incubated for 72 h at 37 ◦ C. After completion of the incubation
period, allantoic fluid was harvested aseptically and tested by haemagglutination (HA) test to confirm
the presence of the recombinant NDV. The total RNA was isolated from the infective allantoic fluid
and subjected to reverse transcription PCR (RT-PCR) to amplify σC gene using the primer pairs P3 and
P4. The resultant recombinant virus was designated as rNDV-R2B-σC.
at room temperature. Cells were washed three times with PBS and incubated for 1 h with a mixture
of antibodies. Briefly, cells were incubated for 1 h with a mixture of anti-NDV polyclonal antibody
(Abcam, Cambridge, UK; 1:50 dilution) and ARV specific primary antibody (Abcam, Cambridge, UK;
1:100 dilution). Following the incubation period, cells were washed three times with PBS and incubated
with a mixture of Alexa Fluor (R) 568-labelled goat anti-chicken IgG (Molecular Probes, Eugene, USA,
1:200 dilution) and FITC labelled rabbit anti-chicken IgG (Sigma, USA; 1:250 dilution) and kept for
1 h at room temperature. Nuclear staining was performed using DAPI (Molecular Probes, Eugene,
USA) at 1:1000 dilution. Finally, the cells were visualized for corresponding fluorescence and images
were taken using Fluo View FV1000 confocal microscope (Olympus, Tokyo, Japan) at the matching
excitation and emission filters for FITC and Alexa Fluor 568.
4.7. Immunogenicity and Protective Efficacy of the Recombinant NDV Expressing the σC Gene of ARV
The immunogenicity and protective efficacy of the recombinant virus rNDV-R2B-σC was evaluated
in SPF chickens. A total of 48 chickens were randomly divided into 5 groups (Table 1). Pre-challenge
serum samples were collected at weekly intervals from all the birds. Humoral immune response was
evaluated by haemagglutination inhibition (HI) test and recombinant nucleocapsid protein-based
enzyme-linked immunosorbent assay (ELISA) for checking the antibodies against NDV and recombinant
σC protein-based ELISA for checking the anti-σC antibody of ARV. Cell-mediated immune response
was evaluated by antigen specific lymphocyte transformation test and gene expression analysis of
Pathogens 2019, 8, 145 18 of 21
cytokine genes IL–1β, IL–4, IL–12, IL–13 and IFN-γ using real-time PCR (Bio-Rad, USA) with published
primers [51].
To determine the protective efficacy of the recombinant viruses, birds (n = 6) from groups one,
two, three and five were challenged with virulent NDV (105 ELD50 /mL/bird) and birds (n = 6) from
group one, three, four and five were challenged with virulent ARV (105 TCID50 /mL/bird) [48] at 62 days
of age. Following the challenge, birds were observed for 10 days to study for the appearance of clinical
signs of both NDV and ARV infection and the surviving birds were sacrificed humanely. Following
the challenge, oropharyngeal and cloacal swabs were collected aseptically in brain heart infusion broth
(BD Diagnostics, Gurgaon, India) from the birds on 2- and 4-day post-challenge (dpc) to determine the
shedding of the virus. The swab samples collected from the same group were pooled together and
clarified by centrifugation at 1000× g for 15 min and was inoculated in 9-day- old embryonated SPF
chicken egg through allantoic cavity route. After 72 h of incubation of the eggs at 37 ◦ C, allantoic fluid
was harvested and used in the HA assay to check the presence of the virus as well as to determine the
viral titre.
To study the histopathological changes due to virulent NDV and ARV challenges, organs viz.,
spleen, bursa of Fabricius, caecal tonsils, footpad were collected from the experimental birds and
fixed in 10% neutral buffered formalin (NFB). The formalin-fixed organ samples were subjected to
processing by paraffin-embedded sectioning and 4–6 µm sections were made and mounted onto the
slides for haematoxylin and eosin (H&E) staining. Stained slides were viewed under an inverted light
microscope (Leica Microsystems, Wetzlar, Germany) for detection of histopathological changes.
5. Conclusions
The present work generated a recombinant NDV incorporating σC gene of ARV by reverse
genetics to be used as a bivalent vaccine candidate that affords 100% protection against NDV and ARV
infections in SPF chickens. This can help the poultry industry in reducing the number of vaccines
given to birds and the cost of vaccination to a greater extent. However, the efficacy of this vaccine
needs to be explored further in young chickens harbouring maternal antibodies.
Author Contributions: Conceptualization, S.D., M.M.C. and V.N.V; Data curation, S.D. and M.M.C. Formal
analysis, S.D., C.M.M., K.Y., D.C.P. and S.R.; Funding acquisition, S.D. and M.M.C.; Investigation, S.D., M.M.C.
and D.P.S.; Methodology, D.P.S., K.Y., D.C.P, N.R., A.L.D. and A.K.M.; Project administration, M.M.C.; Resources,
S.D. and M.M.C.; Supervision, S.D. and M.M.C.; Validation, S.D.; Writing—original draft, S.D. and D.P.S.;
Writing—review and editing, M.M.C., V.N.V., S.D., D.C.P., A.K.M. and S.R.
Funding: The research work was supported by grants from the Department of Biotechnology, Government of
India (BT/PR15373/AAQ/57/116/2011 and BT/PR21576/ADV/90/249/2016) and National Agricultural Science Fund,
ICAR (NFBSFARA/BS-3010).
Acknowledgments: The authors gratefully acknowledge the support and facilities provided by Director, Indian
Veterinary Research Institute, India.
Conflicts of Interest: The authors hereby declare that there is no conflict of interest in the manuscript.
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