RESEARCH ARTICLE
Decellularized Wharton’s Jelly from human
umbilical cord as a novel 3D scaffolding
material for tissue engineering applications
Sushma Jadalannagari1,2
, Gabriel Converse1,3
, Christopher McFall3
, Eric Buse3
,
Michael Filla4
, Maria T. Villar5
, Antonio Artigues5
, Adam J. Mellot6
, Jinxi Wang7
, Michael
S. Detamore8
, Richard A. Hopkins1,3
, Omar S. Aljitawi1,2
*
1 Department of Bioengineering, University of Kansas, Lawrence, Kansas, United States of America,
2 Department of Hematology/Oncology, University of Kansas Medical Center, Kansas City, Kansas, United
States of America, 3 Cardiac Regenerative Surgery Research Laboratories, Children’s Mercy Hospital and
Clinics, Kansas City, Missouri, United States of America, 4 Department of Anatomy and Cell Biology,
University of Kansas Medical Center, Kansas City, Kansas, United States of America, 5 Department of
Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United
States of America, 6 Department of Plastic Surgery, University of Kansas Medical Center, Kansas City,
Kansas, United States of America, 7 Department of Orthopedic Surgery, University of Kansas Medical
Center, Kansas City, Kansas, United States of America, 8 Department of Chemical and Petroleum
Engineering, University of Kansas, Lawrence, Kansas, United States of America
* omar_aljitawi@urmc.rochester.edu
Abstract
In tissue engineering, an ideal scaffold attracts and supports cells thus providing them with
the necessary mechanical support and architecture as they reconstruct new tissue in vitro
and in vivo. This manuscript details a novel matrix derived from decellularized Wharton’s
jelly (WJ) obtained from human umbilical cord for use as a scaffold for tissue engineering
application. This decellularized Wharton’s jelly matrix (DWJM) contained 0.66 ± 0.12 μg/mg
sulfated glycosaminoglycans (GAGs), and was abundant in hyaluronic acid, and completely
devoid of cells. Mass spectroscopy revealed the presence of collagen types II, VI and XII,
fibronectin-I, and lumican I. When seeded onto DWJM, WJ mesenchymal stem cells
(WJMSCs), successfully attached to, and penetrated the porous matrix resulting in a slower
rate of cell proliferation. Gene expression analysis of WJ and bone marrow (BM) MSCs cul-
tured on DWJM demonstrated decreased expression of proliferation genes with no clear
pattern of differentiation. When this matrix was implanted into a murine calvarial defect
model with, green fluorescent protein (GFP) labeled osteocytes, the osteocytes were
observed to migrate into the matrix as early as 24 hours. They were also identified in the
matrix up to 14 days after transplantation. Together with these findings, we conclude that
DWJM can be used as a 3D porous, bioactive and biocompatible scaffold for tissue engi-
neering and regenerative medicine applications.
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 1 / 23
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OPEN ACCESS
Citation: Jadalannagari S, Converse G, McFall C,
Buse E, Filla M, Villar MT, et al. (2017)
Decellularized Wharton’s Jelly from human
umbilical cord as a novel 3D scaffolding material
for tissue engineering applications. PLoS ONE 12
(2): e0172098. doi:10.1371/journal.pone.0172098
Editor: Aditya Bhushan Pant, Indian Institute of
Toxicology Research, INDIA
Received: September 14, 2016
Accepted: January 31, 2017
Published: February 21, 2017
Copyright: © 2017 Jadalannagari et al. This is an
open access article distributed under the terms of
the Creative Commons Attribution License, which
permits unrestricted use, distribution, and
reproduction in any medium, provided the original
author and source are credited.
Data Availability Statement: All relevant data are
within the paper and its Supporting Information
files.
Funding: The authors received no specific funding
for this work.
Competing interests: As employees of the Leibniz
Institute for Prevention Research and Epidemiology
– BIPS, KT, BK, and TS have performed research
studies sponsored by pharmaceutical companies
(Bayer-Schering, Celgene, GSK, Mundipharma,
Novartis, Purdue, Sanofi-Aventis, Sanofi-Pasteur,
1. Introduction
Disease or trauma to the human body leads to damage and degeneration of tissues, thereby
requiring their repair, replacement or regeneration. Tissue regeneration requires an optimal
combination of cells, scaffolds, appropriate media and growth factors. The properties of an
ideal scaffold for tissue regeneration are high porosity, biocompatibility, biodegradability and
mechanical properties consistent with and suitable to the location of implant [1]. Current
treatment options for tissue regeneration involve the use of autografts or allografts. Neverthe-
less, autografts can be difficult to obtain due to expensive and painful procedures, while allo-
grafts pose the risk of infection and immune rejection. Several types of scaffolds from natural
or synthetic sources (polymers, ceramics, and composites) have been developed for tissue
regeneration over the years [1]. Since, such scaffolding is associated with material-specific lim-
itations, there is growing interest in the use of biocompatible, natural bioactives, or synthetic
materials as alternatives. [2–8].
Wharton’s jelly (WJ), is a firm mucoid connective tissue surrounding umbilical cord vessels
[9], possessing many unique biochemical characteristics required for a scaffold. Mesenchymal
stem cells (MSCs) are derived from WJ and immersed in ground substance that is rich in colla-
gen, hyaluronan, and also containing numerous sulfated glycosaminoglycans (GAGs) [9].
MSCs widely express the archetypal hyaluronan receptor, CD44, also expressed on osteocytes,
chondrocytes, and hematopoietic marrow cells [10]. WJ is a rich source of peptide growth fac-
tors, notably insulin-like growth factor-1 (IGF-1) and to a lesser extent platelet-derived growth
factor (PDGF), [11] both of which are linked to controlling cell proliferation, differentiation,
synthesis and remodeling of the extracellular matrix [12].
This work is based on a hypothesis that customized cell removal procedures can effectively
process WJ to produce a decellularized, bioactive Wharton’s jelly matrix (DWJM). We also
postulated that DWJM would provide a 3D environment specifically well suited to support
undifferentiated mesenchymal cell culture. This paper details the decellularization processes
used to obtain this matrix, in addition to its characterization and analysis of its structural con-
tents. Here, we also demonstrate that WJ and bone marrow MSCs (BMMSCs) can be seeded
and cultured in vitro upon this matrix. We further studied the gene expression profiles of these
MSCs when seeded on our 3D scaffold, and also assessed the biocompatibility of our matrix in
vivo using a murine bone defect model.
2. Materials and methods
Human umbilical cord collection, WJMSCs and WJ tissue harvest followed by decellularization
were performed in accordance with the approved University of Kansas Medical Center’s Insti-
tutional Review Board protocol # HSC 12129 (title—Decellularization of umbilical cord Whar-
ton’s jelly for tissue regenerative applications including avascular necrosis) at the University of
Kansas Medical Center. Consents were collected from donors by obtaining their written signa-
tures on the approved informed consent form. Umbilical cords were immediately collected
from consented mothers with full-term pregnancy after normal vaginal delivery. The umbilical
cord was placed in a transport solution made of Lactated Ringer’s solution supplemented with
penicillin 800 U/mL (Sigma-Aldrich, St. Louis, MO), streptomycin 9.1 mg/mL (Sigma-Aldrich),
and amphotericin 0.25 mg/mL (Sigma-Aldrich) and immediately refrigerated at 4˚C. The decel-
lularization process was initiated within 72 hours of umbilical cord collection.
2.1 Decellularization process
The decellularization procedure has recently been described in our earlier publication [13].
Briefly, fresh human umbilical cords were transported from the delivery room in a transport
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 2 / 23
Stada, and Takeda) unrelated to this study. This
does not alter our adherence to PLOS ONE policies
on sharing data and materials.
solution at 4˚C. Umbilical cords were dissected in a laminar flow safety cabinet, by separating
the matrix into large oval pieces away from the surrounding membranes and vascular struc-
tures. They were then subjected to two cycles of osmotic shock, alternating with a hypertonic
salt solution containing sodium chloride, mannitol, magnesium chloride, and potassium chlo-
ride with an osmolarity of approximately 1,275 mOsm/L, and against a hypotonic solution of
0.005% Triton X-100 in ddH2O centrifuged at 5,000 rpm at 4˚C.
After two cycles of osmotic shock, the tissues were subjected to an anionic detergent
(sodium lauryl) and, sodium succinate (Sigma L5777), then switching to a recombinant
nucleic acid enzyme, (Benzonase™) in buffered (Tris HCl) water for 16 hours. Following this,
an organic solvent extraction with 40% ethyl alcohol was performed for 10 minutes at 5,000
rpm in the centrifuge at 4˚C. All of the detergent and other processing residuals were then
bound and removed utilizing ion exchange beads (iwt-tmd (Sigma), XAD-16 Amberlite beads
(Sigma), and Dowel Monosphere 550A UPW beads (Supelco)) in a reciprocating flow-through
glass system at room temperature in ddH2O for 30 hours. The decellularized matrix was cryo-
preserved using 10% human recombinant albumin (Novozymes) and 10% DMSO (Sigma)
solution in standard RPMI media, employing a material-specific computer controlled freezing
profile developed to freeze at -1˚C/minute to -180˚C [14].
2.2 Isolation, expansion, and WJMSCs seeding onto DWJM
a. Preparation of DWJM for seeding with WJMSCs. Freshly obtained fragments of
DWJM were transferred to a large petri dish and covered with phosphate buffered saline
(PBS). DWJM pieces (5–7 mm in diameter) were obtained using a sterile 5–7 mm skin punch
biopsy kit. The resulting DWJM pieces were cylindrical in shape and with non-uniform
heights varying between 2–3 mm. DWJM scaffold volume obtained was approximately 72
mm3
. From this point on, these pieces of DWJM will be referred to as “DWJM scaffolds”.
DWJM scaffolds were transferred using sterile forceps to a large petri dish and washed twice
with PBS then transferred to non-tissue culture treated plates at the time of seeding.
b. MSC isolation and expansion.
i. WJMSCs—WJMSCs were isolated and expanded according to the procedures described
by Wang et al [15]. Briefly, the outer layer of the cord was carefully removed and the cord was
cut into smaller segments. The blood vessels were dissected from these cord segments and
then cut into smaller pieces and digested with Collagenases (Worthington Biochemical Corpo-
ration, Lakewood, NJ) in low glucose Dulbecco’s Modified Eagle’s Medium (DMEM) (Sigma-
Aldrich) with 10% Fetal Bovine Serum (FBS) (Atlanta Biologics, Atlanta, GA) and 1% penicil-
lin/streptomycin (Sigma-Aldrich) overnight at 37˚C to obtain WJMSCs. The WJMSCs were
passaged and maintained in this low glucose DMEM-10% FBS-1% penicillin/streptomycin
medium with passages 4–9 being used for the following experiments.
ii. BMMSCs—BMMSCs were isolated from bone marrow aspirates of healthy consented
donors at University of Kansas Medical Center (HSC # 5929). The cells were isolated following
standard ficoll density gradient separation method (Lymphoprep, Stem Cell Technologies,
Vancouver, BC). The isolated cells were maintained in high glucose DMEM (Sigma-Aldrich),
20% FBS (Atlanta Biologics) and 1% penicillin/streptomycin (Sigma-Aldrich) at 37˚C, under
5% CO2 and 90% humidity.
c. MSC characterization and phenotyping. The MACS Miltenyi Biotec MSC human
phenotyping kit was used to characterize the expanded WJMSCs and BMMSCs, and analyzed
by BD Flow Cytometer LSR2 (Beckton Dickinson). MSCs isolated from human umbilical cord
and bone marrows were stained for CD14, CD20, CD34, CD45, CD73, CD90 and CD105.
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 3 / 23
d. MSC seeding onto DWJM. For each set of seeding experiments, Single-donor (n = 1)
WJMSCs or BMMSCs were used. 1 x 106
MSCs suspended in 50-μL culture medium were
seeded on each DWJM scaffold (average seeding density 1.4 x 104
–4 x 104
/mm3
per DWJM
scaffold) in a 48-well plate, followed by addition 1 mL of culture medium per well.
For the gene expression studies, 0.25 x 106
–1 x 106
WJMSCs or BMMSCs from passages
4–9 were seeded on DWJM in a 24-well non tissue culture treated plate (Corning Inc., Corn-
ing, NY) for 4 to 7 days and cultured in their respective media.
2.3 Characterization of DWJM
a. DNA quantification. DNA in the samples was isolated using the Qiagen DNeasy Blood
and Tissue Kit (Dusseldorf, Germany) according to the manufacturer’s instructions. Pico
Green dye (Molecular Probes, Eugene, OR) was used as a label and the extracted DNA quanti-
fied fluorometrically using Quant-iT dsDNA HS (high sensitivity) Kit (Invitrogen, Carlsbad,
California). The amount of extractable DNA was calculated as wet weight tissue and expressed
as a percent reduction in extractable DNA relative to that for non- decellularized tissue. All
analyses were run in triplicate.
b. Glycosaminoglycan’s (GAGs) content analysis. The Blyscan assay (Biocolor Life Sci-
ences, UK) was used according to the manufacturer’s instructions for analysis of sulfated gly-
cosaminoglycan content. Tissue samples from native umbilical cord WJ and DWJM were
analyzed and the results were reported as μg/mg of glycosaminoglycan per wet tissue weight.
c. Protein identification by mass spectrometry. DWJM samples from two different
umbilical cords samples were analyzed following two methods of protein extraction. For the
first method, DWJM was snap-frozen using liquid nitrogen, tissue homogenized, and sus-
pended in WJMSC culture medium as described above.
The second method used the Ready Prep Protein Extraction Kit with zwitterion detergent
ASB-14 as a solubilizing agent (Bio-Rad Laboratories, Inc., Hercules, CA). This step was fol-
lowed by a cleanup step to free the proteins of ionic contaminants by selective precipitation
of detergents, lipids using Ready Prep 2-D Cleanup Kit (Bio-Rad Laboratories, Inc., Hercu-
les, CA). The protein pool present in the extracts was denatured in 6M guanidine hydro-
chloride, reduced, alkylated, and subsequently digested for 18 h with sequencing grade
trypsin (12 ng/L, Promega, Madison, WI) at 37˚C. Following enzymatic digestion, the
extracted peptides were concentrated to a final volume of 50 μL on a Centrivac Concentra-
tor (Labconco, Kansas City, MO). The peptide extracts were analyzed by reversed phase
chromatography using a 2D NanoLC HPLC (Eksigent Technologies, Dublin, CA) coupled
to a Linear Thermo Electron Quadripole Electron Trap—Fourier Transformation (LTQ FT)
mass spectrometer (Thermo Fisher Scientific, Waltham, MA). The mass spectrometer was
controlled by the Xcalibur software to perform continuous mass scan on the FT in the range
of 400–1900 m/z at 50,000 resolutions, followed by MS/MS scans on the ion trap of the six
most intense ions. All tandem mass scans were searched using the Proteome Discoverer
(version 1.3, Thermo Fisher) against a human protein database using trypsin cleavage speci-
ficity, with a maximum of 2 missed cleavages. The following variable modifications were
selected: oxidation of M (methionine), deamidation of N (asparagine), and Q (glutamine),
and carboxymethylation of C (cysteine) selected as fixed modifications, with a maximum of
4 modifications/peptides allowed. Estimation of false discovery rate (FDR) was conducted
by searching all spectra against a decoy database. For protein identification an FDR >1%
(high confidence) was defined for all peptides of interest, which were subsequently reviewed
manually.
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 4 / 23
2.4 Evaluating seeded WJMSC adherence to and penetration of DWJM
scaffolds
a. Confocal microscopy. To assess WJMSCs attachment to DWJM scaffolds after cell
seeding and culture, scaffolds were transferred to a viewing chamber for confocal microscopy
examination using a Fluoview scanning laser confocal microscope (Olympus, Center Valley,
PA). Prior to viewing, the seeded DWJM scaffolds were rinsed twice with PBS and incubated
with 1 mL culture medium containing 2 μg Calcein stain (Molecular Probes, Eugene, OR).
Calcein is a cell-permeant dye that is converted to green-fluorescent Calcein when in live cells.
Using this stain, we tracked live WJMSCs after their being seeded onto DWJM scaffolds at 2,
24 and 48-hour intervals.
b. Dual beam electron microscopy. MSCs were seeded on DWJM as described above
and cultured in their appropriate media for 7 days. The matrix with cells was collected after 24
hours and at day 7 and was fixed overnight in 4% paraformaldehyde (VWR, Randor, PA) in
PBS at 4˚C. Tissue specimens were washed three times in PBS then stained with 2% osmium
tetroxide (OT) for 24 hours to label lipids. Since OT gives off a strong electron backscatter sig-
nal, OT- stained samples were again washed three times for 10 minutes in PBS. All samples
were gradually dehydrated with ethanol and cleared in xylene, before being embedded in par-
affin. Samples were sectioned to a thickness of 10 μm or 20 μm using a microtome (Leica, Buf-
falo Grove, IL) and mounted on Super Frost glass slides (Thermo Fisher, Waltham, MA). OT-
stained samples were deparaffinized using two 3 minute washes of xylene and critical-point
dried in 100% ethanol using an Autosamdri 815B super-critical dryer (Tousimis, Rockville,
MD) Samples were sputter-coated with 5 nm of copper using a Q150T Turbo-Pumped Sputter
Coater (Quorum Technologies, West Sussex, and United Kingdom) and then imaged on a
Versa 3D Dual Beam electron microscope (FEI, Hillsboro, OR) at a voltage of 30 kV. An Ever-
hart-Thornley detector (ETD) and circular backscatter (CBS) detectors were used to detect
secondary electrons and backscatter electrons, respectively.
c. Live cell imaging. DWJM scaffolds of 30μ thickness were placed in a 12 well plate and
the matrix blocked with 3% BSA for 2 hours and subsequently incubated with 3 μL anti-fibro-
nectin antibody [F1] (Alexa Fluor1
488) (Abcam, Cambridge, MA) in the dark for 12–15
hours at 4˚C. Immediately prior to being seeded onto DWJM scaffolds, the WJMSCs were cul-
tured in a 12 well plate and labeled using the CellVue1
Burgundy Labeling Kit (Affymetrix
eBioscience, Santa Clara, CA) according to the manufacturer’s instructions. Briefly, 2.5–5 x
105
WJMSCs were seeded on the labeled matrix, and cultured for 24 hours at 37˚C. Imaging
was made on a Leica 10X HC PL Fluotar 506505 objective of a semi-automated Leica DMIRE2
inverted epifluorescent microscope outfitted with a Ludl Bioprecision motorized stage, Sutter
Instruments Xenon Lamphouse with shutters and a Retiga SRV CCD camera controlled by
customized TiLa KU (KU Time Lapse) acquisition and image processing software. Regions
under study/interest were imaged in Bright field, GFP (Chroma 41001 HQ480/40 excitation
HQ535/50 Emission) and CY5 (Chroma 49006 ET620/60 excitation, ET700/75 emission).
DWJM interaction with WJMSCs was imaged at 15-minute intervals over an 18-hour period.
d. Scanning electron microscopy (SEM). The DWJM scaffolds were fixed in 2% glutaral-
dehyde for SEM processing. The fixed samples were washed with PBS for 10 minutes, placed
into buffered 1% osmium tetroxide for 1 hour, and then washed 3 times each for 10 minutes in
distilled water. The samples were then dehydrated through a graded series of ethanol at con-
centrations 30%, 70%, 80%, 95%, and 100% for 15 minutes each. Following this, the samples
were critical point dried in CO2 in a model EMS 850 dryer (Electron Microscopy Sciences,
Hatfield, PA), then mounted onto aluminum and coated with gold in a Pelco SC-6 sputter
coater. The samples were finally viewed using a Hitachi S-2700 scanning electron microscope.
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 5 / 23
e. Transmission electron microscopy (TEM). Scaffolds for TEM were rinsed in a buffer
prior to fixing in 1% to 2% osmium tetroxide for 1 hour. After osmication, the scaffolds were
dehydrated in an ethanol series of 30%, 70%, 80%, 95%, and 100%, 10–15 minutes for each
concentration, then placing them in propylene oxide (PO) twice for 10 minutes. To enhance
tissue infiltration, the scaffolds were then placed in an equal mixture of resin and PO over-
night. At this point, the 1:1 mixture mix was removed from the tissue and fresh 100% resin
mixture added to the sample, and allowed to sit on a platform rocker for at least 30 min. The
samples were subsequently covered in resin and finally were placed in 60˚C oven overnight to
cure the resin. The samples were sectioned afterwards using a Leica UCT ultra microtome slic-
ing at 80 nm in thickness, contrasted with 4% uranyl acetate and Sato’s Lead Citrate and
viewed at 80 KV with a JOEL JEM-1400 TEM.
2.5 Histology and immunohistochemistry
DWJM scaffolds were fixed in either 10% formalin or 4% paraformaldehyde, embedded in par-
affin, sectioned, and stained. Slides were reviewed using an Olympus BX40 microscope and
pictures were acquired using a DP72 digital camera (Center Valley, PA).
a. Gomori’s trichrome staining. Tissue sections were stained with trichrome stain kit—
Richard Allan 87020 (Thermo Fisher, Waltham, MA) according to the manufacturer’s instruc-
tions. Using this stain, the nuclei were stained bluish-black to black, cytoplasm, muscle fibers
and keratin stained red, while collagen and mucus stained blue.
b. Immunohistochemistry. Immunohistochemistry staining was performed at room tem-
perature using an IntelliPATH FLX™ automated stainer (Biocare Medical, Concord, CA) at
room temperatures. Briefly, after deparaffinization, sampleswere blocked in 3% hydrogen per-
oxide for 10 minutes, rinsed and blocked in strepatividin/biotin (Vector Laboratories, Burlin-
game, CA.). The samples were again rinsed and stained for 60 minutes at room temperature
with 1:200 dilution hyaluronic acid binding protein (RMD Millipore, Danvers, MA) followed
by a 15 minute labeling with horse radish peroxidase (HRP) (Dako, Carpinteria, CA). Chro-
mogenic detection of the enzyme conjugate was made using 3,3’ diaminobenzidine (DAB)
(DAkp, Carpinteria, CA) when applied for 5 minutes with slides counterstained with
hematoxylin.
For collagen immunohistochemistry, after deparaffinization and rehydration, the tissue sec-
tions were incubated with a primary antibody against Collagen I (Abcam, Cambridge, MA).
Following a 30-minute incubation at room temperature and rinsing, the sections were incu-
bated with secondary antibody, goat anti-rabbit HRP-polymer MACH 2 rabbit HRP-polymer
(Biocare Medical, Concord, CA). Finally, collagen staining was visualized by DAB (Dako, Car-
pinteria, CA) and the nuclei as counterstained by hematoxylin.
Green fluorescent protein (GFP) immunohistochemistry staining was performed by incu-
bation with primary monoclonal goat-anti GFP antibody (1:100 dilution for 45 minutes), fol-
lowed by secondary MACH2 rabbit antibody (CST, Cell Signaling Technology, Danvers, MA)
MACH 2 for 45 minutes on a Clinical intelliPATH FLX automated slide stainer.
2.6 Evaluating seeded WJMSC proliferation
The alamarBlue1
(AB) cell viability assay (ThermoFisher Sci, Waltham, USA) was used to
assess WJMSC viability and proliferative response following seeding onto DWJM by correlat-
ing fluorescent or absorbance signal related to metabolic activity. DWJM scaffold pieces (7
mm in diameter and 2–3 mm in height) were seeded with the expanded human WJMSCs at 1
x 106
cells onto each DWJM scaffold. For controls, 1 x 106
cells per well were cultured as a
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 6 / 23
monolayer in each well of a 24-well plate. AB was assessed at 24 and 48 hours as well as 1 week
following WJMSC seeding. These experiments were performed in triplicate.
2.7 Evaluating WJMSC migration toward DWJM by the trans-well
migration assay
WJMSC suspension at 3–7 x 105
was loaded to the upper chamber of Transwell set (Costar,
Corning Inc.) and the minced DWJM tissue in low glucose DMEM with 10% Fetal Bovine
Serum (FBS) and 1% Penicillin/Streptomycin added to the lower chamber. After 4 hours, the
trans-wells were removed and the migrated cells counted for viability using a Vi-cell (Beck-
man-Coulter). All the experiments were conducted in triplicate.
2.8 Molecular studies
a. RNA extraction from cells. WJMSCs and BMMSCs were cultured as a monolayer (2D)
or on DWJM (3D) as described in section 2.2d for 7 days. The cells were collected at day 0
(monolayer prior seeding DWJM), day 4 and day 7 after seeding onto the matrix. WJMSCs
were harvested from the scaffolds following overnight digestion with Collagenase II. The
MSCs were washed twice with PBS and centrifuged at 13000 rpm, for 20 minutes at 4˚C to
obtain a cell pellet which was suspended in 1 mL monophasic phenol guanidine isothiocyanate
(Trizol) (Life technologies) and stored at -80˚C until further processing. Once all the samples
were collected, RNA was extracted using the standard procedure according to the manufac-
turer (Life Technologies, Carlsbad, CA).
Briefly, the RNA was separated from the aqueous phase using 0.2 mL chloroform, then 0.7
volumes of isopropanol added with centrifugation to precipitate RNA. The RNA pellet was
washed twice with 75% ethanol and dissolved in 30–50 μL nuclease-free water. RNA was quan-
tified by Nano drop spectrophotometer 8000 (Thermo Fisher Scientific). First, 1.5μg of RNA
was treated and isolated using the DNA-free™ DNase l kit (Life Technologies). Then a high
capacity cDNA reverse transcription kit (Applied Biosystems) was used to generate cDNA
from the extracted total RNA samples by a Bio-Rad T100 thermal cycler.
b. Quantitative real-time PCR analysis. The quantitative real-time PCR (qPCR) reac-
tions (20 μL) were performed with the TaqMan gene expression master mix (Life Technolo-
gies), and TaqMan array 96 well plates (Applied Biosystems, Foster City, CA) using the
StepOnePlus™ real-time PCR system (Applied Biosystems). The primers used are described in
Table 1. The qPCR reactions were performed in triplicate. StepOnePlus™ real-time PCR system
(Applied Biosystems) was used for qPCR. Glyceraldehyde 3-phosphate dehydrogenase
(GAPDH) was used as an internal control to normalize the samples to obtain cycle delta
threshold over background (ΔCT). The delta delta CT method (2-ΔΔCT
) was used to analyze the
relative gene expression levels.
2.9 Animal studies
2.9.1 Animal surgeries. Prior to the animal studies, DWJM scaffolds were washed twice
in PBS and pre-incubated in low glucose DMEM (Sigma-Aldrich) with 10% FBS (Atlanta Bio-
logics) and 1% penicillin/streptomycin (Sigma-Aldrich) for 24 hours at 37˚C, 5% CO2 and
90% relative humidity. After incubation, DWJM scaffolds were washed multiple times in PBS
to remove excess media before transplantation. All the animal experiments were performed in
strict accordance with the approved University of Kansas Medical Center Institutional Animal
Care and Use Committee (IACUC) protocol # 2013.2158. All the animal studies were per-
formed on transgenic 10kB DMP1—Cre floxed mice (6–8 week old) expressing green fluores-
cent protein (GFP)[16]. Mice were anesthetized with intraperitoneal injection (IP) of
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 7 / 23
ketamine (90–150 mg/kg) (Vedco) and xylazine (7.5–16 mg/kg). Buprenorphine SR (0.15–0.5
mg/kg) (Zoopharm pharmacy) was given subcutaneously immediately before the surgical pro-
cedure for analgesia. One midline skin incision of approximately 1cm in length was made on
the dorsal surface of the cranium, followed by the separation of skin and periosteum. A full-
thickness parietal bone defect (5.0-mm in diameter) was implemented with a trephine bur
(Fine Science Tools, Foster City, CA) attached to an electric Dremell hand piece (Ideal micro
drill, Harvard apparatus, Holliston, MA). The defect was left empty (n = 4) or filled with the
decellularized matrix (n = 4) and the skin incision was sutured with 5–0 coated Vicryl (polyga-
lactin 910) (Ethicon™, Johnson and Johnson Co., New Brunswick, NJ). Heat was provided dur-
ing the entire procedure and recovery by circulating warm water blankets to protect the
animals from hypothermia. Post—surgery, the animals were monitored for signs of abnormal
behavior, paralysis, or infection at the surgical site such as swelling, redness and discharge, and
checked daily for 3 days, followed by once every other day for the duration of the study. Ani-
mals with cranial defects, and not receiving an implant served as controls. Craniotomy defects
in mice were either left un-implanted (control) or implanted with DWJM to study the cellular
migration and localization by observing GFP expression. The mice were humanely sacrificed
after 14 days by carbon dioxide euthanasia as the primary method of euthanasia, followed by
decapitation as the secondary method in accordance with the above-mentioned institutional
IACUC protocol.
Table 1. Real time RT-PCR TaqMan primers and their description.
Gene symbol Detector Gene name
GAPDH GAPDH-Hs99999905_m1 Glyceraldehyde-3-phosphate dehydrogenase
ACAN ACAN-Hs00153936_m1 Aggrecan
SOX9 SOX9-Hs00165814_m1 SRY (sex determining region Y)-box 9
COL2A1 COL2A1-Hs00264051_m1 Collagen, type II, alpha 1
ALPL ALPL-Hs01029144_m1 Alkaline phosphatase, liver/bone/kidney
RUNX2 RUNX2-Hs00231692_m1 Runt-related transcription factor 2
ITGB1 ITGB1-Hs00559595_m1 Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
CD44 CD44-Hs01075861_m1 CD44 molecule (Indian blood group)
THY1 THY1-Hs00174816_m1 Thy-1 cell surface antigen
ENG ENG-Hs00923996_m1 Endoglin
ALCAM ALCAM-Hs00977641_m1 Activated leukocyte cell adhesion molecule
CD14 CD14-Hs00169122_g1 CD14 molecule
MKI67 MKI67-Hs01032443_m1 Antigen identified by monoclonal antibody Ki-67
BAX BAX-Hs00180269_m1 BCL2-associated X protein
VIM VIM-Hs00185584_m1 Vimentin
ACTA2 ACTA2-Hs00426835_g1 Actin, alpha 2, smooth muscle, aorta
SPP1 SPP1-Hs00959010_m1 Secreted phosphoprotein 1
COL1A COL1A1-Hs00164004_m1 Collagen, type I, alpha 1
COL4A1 COL4A1-Hs00266237_m1 Collagen, type IV, alpha 1
COL6A1 COL6A1-Hs01095585_m1 Collagen, type VI, alpha 1
DES DES-Hs00157258_m1 Desmin
HAS2 HAS2-Hs00193435_m1 Hyaluronan synthase 2
BGN BGN-Hs00156076_m1 Biglycan
VCAM1 VCAM1-Hs01003372_m1 Vascular cell adhesion molecule 1
NOS3 NOS3-Hs01574659_m1 Nitric oxide synthase 3 (endothelial cell)
PCNA PCNA-Hs00427214_g1 Proliferating cell nuclear antigen
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DWJM as a 3D biocompatible scaffold
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2.9.2 In vivo IVIS imaging. Mice were anaesthetized with isofluorane gas prior to imag-
ing at 24 and 48 hours by an IVIS station (Perkin Elmer), and then euthanized according to
protocol.
2.9.3 Tissue samples. Cranial samples with the matrix were collected in 10% phosphate
buffered formalin (Newcomen Supply) within 24 hours. Tissue specimens for the animal study
were decalcified using the Rapid Bone Decalcifier solution (American MasterTech) for 5–10
minutes, paraffin embedded, sectioned vertically, and stained as described above.
2.10 Statistical analysis
All data were expressed as means ± standard error of mean (SEM) using a threshold of
p 0.05 determined statistically significant, and analyzed by the Student’s t-test, two-way
analysis of variance (ANOVA), with post-hoc Bonferroni, or non-parametric Man-Whitney U
testing. A threshold of p 0.05 determined statistical significance. The statistical analyses
were performed utilizing Graph Pad Prism software version 6 (Graph Pad Software, Inc.).
3. Results
3.1. Characterization of DWJM scaffold structure, biochemical
components, and biomechanics
DWJM scaffolds were prepared from the isolated and decellularized matrix as shown in Fig
1A. Various methods were used to test the effectiveness of the decellularization process for
these scaffolds. Histologically: DWJM was porous and devoid of intact cells, nuclei or other
cellular components (Fig 1B). Trichrome staining of the human umbilical cord (Fig 1D) shows
collagen-rich extracellular matrix in blue, nuclei/cells in dark blue/black distributed in the
matrix and blood vessel wall, and blood in red. Since blood vessels are removed and the cells
are lost during the decellularization process, the matrix obtained is rich in blue stain represent-
ing collagen (Fig 1E). Immunohistologically: staining for collagen (Fig 1C) and hyaluronic
acid (Fig 1F) demonstrate that DWJM is rich in collagen and hyaluronic acid (Fig 1C and 1F).
Scanning electron microscopy imaging: indicates that DWJM has interconnected open spaces,
with sizes ranging from 20 to 100 μm (Fig 1G). Transmission electron microscopy: demon-
strates an absence of intact cells the DWJM scaffold under examination (Fig 1H). Thus, the
decellularization process resulted in a porous matrix, rich in collagen and hyaluronic acid and
devoid of cells.
3.1.1 DNA quantification studies. DNA was isolated from the native WJ matrix and
from DWJM and quantified as described above. Mean dsDNA content per DWJM wet weight
sample was 1.7 x 10−3
μg/mg (range: 1.4 x 10–3–2 x 10−3
μg/mg), while the mean dsDNA per
WJ matrix wet weight sample was 5.1 x 102
μg/mg (range: 3.17 x 10–2–7.33 x 10−2
μg/mg) (Fig
2A). Therefore, 96.6% ± 0.4% reduction in dsDNA was achieved for all the scaffolds analyzed,
thus indicating that the majority of cells and nuclei of human umbilical cord were removed.
3.1.2. Protein content analysis. Mass spectrometry revealed that the DWJM matrix pieces
were composed of several structural proteins, including collagen I, III, VI, and XII. Transform-
ing growth factor beta (TGFB) was also observed in addition to matrix proteins such as fibro-
nectin-I, which binds to extracellular matrix components for instance collagen, heparin
sulfate, tenascin and lumican. A full list of the proteins identified on mass spectrometry evalua-
tion of DWJM is as shown in Table 2.
3.1.3. Glycosaminoglycan content analysis. Glycoaminoglycans (GAGs) are glycopro-
teins with a protein core and long unbranched polysaccharide with repeating disaccharide
units. Among other functions, through its carboxylic and /or sulfate ester groups, GAGs can
DWJM as a 3D biocompatible scaffold
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Fig 1. Characterization of Decellularized Wharton’s Jelly Matrix (DWJM). A) A fragment of the isolated DWJM. A skin punch biopsy kit,
(right lower corner image) was used to obtain 5–7 mm DWJM scaffolds. B) hematoxylin and eosin (H&E) stained sections of the DWJM
showing empty spaces. (Scale bar represents 0.1 mm.) C) Collagen I immunohistochemistry of the DWJM (scale bar is 50 μm), D)
Trichrome staining images of human umbilical cord, and E) Decellularized Wharton’s jelly matrix. (Scale bar represents 50 μm.) Red color
represents blood, light blue collagen, and cells/nuclei are in black/dark blue. F) Immunohistochemical staining of DWJM by anti- hyaluronic
acid antibody. The matrix is rich in collagen and there is abundant hyaluronic acid expression at some parts compared to the others. (Scale
bar represents 25μm.) G) Scanning electron microscopy images of DWJM. One surface appears flat with compact matrix (left lower image)
while, less dense tissue with open spaces is identified in other areas (lower right and middle images). (Scale bar for the full picture is
600 μm.) H) Transmission electron microscopy images of DWJM. More electron-dense areas of DWJM (left upper image) and less electron
dense areas (right upper image) are observed. No intact cells were observed in any of the panels. (Scale bar for left upper image is 2 μm, for
right upper image 10 μm, and for the two lower images 500 nm.).
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form bridges and link collagens constructing an interconnected network of extracellular
matrix to maintain and define shape of connective tissues and organs [17, 18]. Glycosamino-
glycan analysis indicated that DWJM contained sulfated GAGs (mean = 0.661 ± 0.107 μg/mg),
which was significantly less than that for native umbilical cord Wharton’s jelly tissue
(3.0 ± 0.355 ug/mg, <p = 0.05) (Fig 2B). The loss of various cell types such as human umbilical
vein cells (HUVECs), Wharton’s jelly mesenchymal stem cells (WJMSCs), and umbilical cord
blood mesenchymal stem cells (UCBMSCs) during processing may account for the reduced
content of GAGs (19), yet retaining some in the scaffold material.
3.2. DWJM scaffold seeding with WJ and BM MSCs
3.2.1. MSC characterization by flow cytometry. The isolated WJMSCs (Fig 3A) and
BMMSCs (Fig 3B) were plastic- adherent and stained positive for MSC markers such as CD73,
CD90, and CD105 by flow cytometry. WJMSCs and bone marrow mesenchymal stem cells
(BMMSCs) were negative for hematopoietic cells markers CD45, CD34, CD14 or CD11b,
CD79α or CD19.
3.2.2 Assessment of MSC interactions with DWJM. WJMSC interactions with DWJM
were studied using several modalities. Cell The adherence to and penetration into the matrix
were assessed as early as 24 hours.
WJMSC were labeled with live cell calcein green stain (CGS), and their interactions post-
seeding with the DWJM scaffolds were followed by confocal microscopy. DWJM devoid of
live cells did not show any fluorescence although the media in the culture well was saturated
with calcein green. On the other hand, clusters of round cells were seen on the surface of
Fig 2. Quantification of DWJM. A) DNA quantification study performed on the matrix before decellularization and after decellularization.
DWJM showed significantly less DNA compared to the native WJ matrix before decellularization. B) Glycosaminoglycan content assessment
of the matrix before and after decellularization. (* Indicates statistical significance (p < .05)).
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Table 2. Proteins identified in Decellularized Wharton’s Jelly Matrix (DWJM) by mass Spectrometry.
Protein name Accession number
(1)*
Sequence
coverage
MW
[kDa]
Theoretical.
pI
Peptides
number
Unique
Peptides
Collagen alpha-3(VI) 219521324 13.70 278.0 8.15 18 18
Collagen type I alpha-1 110349772 6.01 138.8 5.80 7 2
Collagen type I alpha 1 180392 9.13 98.5 6.83 7 2
Collagen, type VI, alpha 1 119629727 12.06 108.5 5.43 8 8
Human Serum Albumin 55669910 16.78 65.2 5.80 7 7
Collagen type I alpha 2 825646 6.49 72.2 7.96 4 4
Collagen type VI alpha-2 isoform 2C2 115527062 13.74 108.5 6.21 8 8
Fibronectin 1 219518912 5.38 239.5 5.88 5 5
G-gamma-hemoglobin 183851 31.68 11.0 6.68 2 2
Protein kinase, DNA-activated, catalytic
polypeptide
119607089 0.47 458.5 7.08 1 1
Tenascin C 156229767 4.93 210.4 4.98 4 4
TGFBI, beta-induced transforming growth factor 221044656 19.25 55.7 6.84 4 4
Lumican 4505047 15.68 38.4 6.61 3 3
Collagen, type III, alpha 1 119631314 2.66 106.3 8.10 2 2
Osteoglycin 55957237 13.06 30.4 8.34 3 3
TGFBI beta-induced transforming growth factor 37589544 3.00 75.1 7.23 1 1
Actin, alpha 119612724 12.50 30.3 5.00 2 1
Beta actin, gamma 1 194375299 10.21 37.3 5.71 2 1
HCG2044004 Human chorionic growth hormone 119628289 46.88 3.6 9.32 1 1
Collagen, type XII, alpha 1, isoform CRA_c 119569135 2.22 333.0 5.53 3 3
Hemoglobin alpha 2 13958153 59.21 8.4 7.14 2 2
Immunoglobulin heavy chain variable region 145911949 33.33 9.6 6.52 1 1
Ig G1 H Nie 229601 3.57 49.2 8.54 1 1
Decorin 119617856 14.29 28.0 8.13 2 2
Unnamed protein product 40036688 17.72 17.8 8.38 1 1
N6AMT2 Lysine N-methyl transferase 119628685 29.07 9.8 4.36 1 1
Dynein, axonemal, heavy chain 14 220732359 5.31 40.7 5.21 1 1
Chain D, Crystal Structure Of A Sparc-Collagen
Complex
215261061 36.36 3.0 11.00 1 1
Golgin subfamily A member 3 (GOLGA3) protein 38174254 4.63 93.0 5.05 1 1
Glyceraldehyde 3-phosphate dehydrogenase 134254708 14.46 17.3 8.60 1 1
Triacylglycerol lipase (EC 3.1.1.3), hormone-
sensitive—human
1082874 3.18 85.4 7.77 1 1
PLEKHG3 protein Pleckstrin homology domain
family G
120537866 3.32 80.8 5.40 1 1
OPK V Other protein kinase group, NimA family 38502049 4.01 67.9 8.98 1 1
Plexin D1, isoform CRA_c 119599646 1.09 193.4 6.96 1 1
CDH24 Cadherin 24 28375477 10.79 26.3 5.43 1 1
Beta IV spectrin isoform sigma3 11602888 1.76 148.5 6.37 1 1
FBLN1 Fibulin-1 22761800 3.61 70.5 5.91 1 1
Unnamed protein product 40035675 3.16 68.9 9.32 1 1
Immunoglobulin heavy chain variable region 13171510 52.73 6.2 8.76 1 1
Periostin isoform thy8 166343771 3.19 80.3 8.19 1 1
Transferrin receptor protein 2 33589848 3.37 88.7 6.11 1 1
H2AFJ histone 194382012 17.12 12.1 10.40 1 1
Large tumor suppressor, homolog 2 variant 62089380 1.95 101.4 9.22 1 1
(Continued)
DWJM as a 3D biocompatible scaffold
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seeded DWJM scaffolds within 2 hours of seeding. (Fig 4A). Elongated spindle shaped cells
were noted inside DWJM within 48 hours. (Fig 4A).
Since, early interactions may not represent cell behavior at a later time point, we evaluated
WJMSC interaction with DWJM at 1 week following their seeding using FEI Versa 3D dual
beam imaging. DWJM fibers of varying diameters and pore sizes were stained purple (Fig 4B),
while we observed spindle shaped WJMSCs arranged along the fibers of DWJM (Fig 4C).
We performed live imaging after staining the matrix with cells to further evaluate WJMSC
interaction with DWJM. WJMSCs were observed migrating continuously in and out of the
matrix. Cell morphology changed with the cells in the matrix becoming spindle-shaped, and
developing cellular extensions while moving in and out of the matrix. Some WJMSCs could be
seen in stages of division and proliferation. As the cells migrated outside the matrix, it
appeared as though they were pulling part of the matrix material along with them (S1 Video).
Since DWJM is a three-dimensional structure, imaging DWJM at different z-planes demon-
strated that the WJMSCs were penetrating the matrix at various depths (S2 Video). WJMSCs
can be seen migrating on the surface of DWJM, within DWJM, and outside of DWJM. Thus,
these studies demonstrated that WJMSCs did penetrate into DWJM, continuously migrating
and proliferating throughout the spaces and dimensions DWJM scaffold.
3.3 Proliferation of WJMSCs seeded onto DWJM scaffolds
Next, we examined DWJM effects on WJMSC proliferation using the Alamar Blue cell viability
assay. WJMSCs cultured as a monolayer (2D) served as controls. After 1 week, WJMSCs cul-
tured in 3D had significantly lower fluorescence compared to WJMSCs cultured in 2D, indi-
cating that the cell-matrix interactions allowed 3D WJMSCs to proliferate, yet at a lower
extent compared to WJMSCs cultured in 2D (Fig 5A).
Table 2. (Continued)
Protein name Accession number
(1)*
Sequence
coverage
MW
[kDa]
Theoretical.
pI
Peptides
number
Unique
Peptides
Truncated beta-globin 58201131 47.50 4.5 9.47 1 1
Dermatopontin 27151769 39.8 24 4.82 4 4
Serum albumin preproprotein [Homo sapiens] 4502027 36.29 69.3 6.28 17 17
Ig kappa chain C region 125145 32.08 11.6 5.87 2 2
Fibrinogen beta chain 399492 26.68 55.9 8.27 6 6
Fibrillin-1 311033452 17.69 312 4.93 25 25
Apolipoprotein A-I isoform X2 [Homo sapiens] 530398069 15.73 30.8 5.76 3 3
Ig gamma-1 chain C region 121039 15.5 36.1 8.19 3 3
Mimecan isoform X2 [Homo sapiens] 530391203 11.74 33.9 5.63 2 2
Fibrinogen gamma chain 20178280 9.05 51.5 5.6 2 2
Keratin, type I cytoskeletal 9 239938886 8.35 62 5.24 2 2
Fibronectin isoform 6 preproprotein [Homo
sapiens]
47132549 6.8 239.5 5.88 9 9
Fibrinogen alpha chain isoform alpha pre-protein 11761629 6.52 69.7 8.06 3 3
Alpha-fetoprotein 120042 6.4 68.6 5.68 2 2
Keratin, type II cytoskeletal 1 238054406 5.59 66 8.12 3 3
Versican core protein 2506816 2.06 372.6 4.51 3 3
Fibrillin-2 238054385 1.03 314.6 4.86 2 2
* Accession number refers to the accession number in the National Center for Biotechnology Information (NCBI) protein database.
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3.4 Cell migration assay
To understand early adherence of WJMSCs to DWJM, we performed an in vitro trans-well
migration assay using DWJM scaffolds as the cell attractant. Within 4 hours, a significantly
higher number of WJMSCs migrated across the trans-well when DWJM was present (Fig 5B)
thereby suggesting that DWJM acts as a cell attractant. This cell attractant quality of the matrix
was further investigated in our animal model.
3.5 Gene expression studies
A genetic approach was used to further explore the effects of DWJM on WJMSCs. Therefore;
we evaluated genes responsible for cell adhesion, (to study the effects of WJMSC adhesion to
DWJM), those for apoptosis, and those for proliferation (given the observed effects on
WJMSC proliferation using alamar Blue). Through examination of genes associated with
known types of MSC differentiation, we sought to determine the influence of DWJM on
WJMSC differentiation. Similar gene expression studies were performed on BMMSCs, which
served as controls.
Fig 3. MSC characterization by flow cytometry. A) Wharton’s jelly mesenchymal stem cell (WJMSCs) and, B) bone marrow mesenchymal stem cell
(BMMSCs). All MSCs stained positive for CD90 by fluoroscein isocyanate (FITC), CD105 by phycoerythrin (PE) and CD73 by allophycocyanin (APC);
and they were negative for hematopoietic markers CD45, CD34, CD14 or CD11b, and CD20 as analyzed by Cell Profiler (CP) software (Broad Institute).
doi:10.1371/journal.pone.0172098.g003
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A) Cell adhesion genes (Fig 6A and 6G). Expression levels of cell adhesion genes CD 44,
integrin subunit beta 1 (ITGB1) (CD 29), cell surface antigen (Thy1) (CD 90), activated leuko-
cyte adhesion molecule (ALCAM) (CD 166) and vascular cell adhesion molecule-1 (VCAM1)/
(CD106) were tested in WJMSCs and BMMSCs after culturing in DWJM for 7 days. There
was no significant change in the expression of ITGB1, while endoglin membrane glycoprotein
(ENG)/(CD105), THY1, ALCAM and VCAM1 remained below baseline levels in WJMSCS
cultured in DWJM. On the other hand, after 4 days, BMMSCs cultured in DWJM showed 0.5
fold reduction in the expression of ENG, ITGB1, THY1, ALCAM and VCAM1 genes.
Fig 4. Transplantation and culturing of WJMSCs on DWJM. A) Confocal microscopy images of DWJM and WJMSCs on DWJM after 2
hours (upper panel), 1 day (center panel), and 2 days (lower panel) post- cell seeding. The cells are labeled with calcein acetylmethyl (AM)
that stains the live cells in green. Dual beam imaging of B) DWJM and C) DWJM seeded with WJMSCs for 1 week. The Everhart-Thornley
detector (ETD) is a standard secondary electron detector used in scanning electron microscopy to study topography, while the circular
backscatter (CBS) is a backscatter detector that reveals lipid content when samples are stained with osmium tetroxide (OT) (red/orange).
Images have been pseudo-colored to enhance definition proportional to secondary electron signal for ETD. (Scale bar is 20 μm.) DWJM
appears to be a fibrous interpenetrating network with varying pore sizes, while WJMSCs were arranged along the fibers of DWJM.
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However, by day 7 we observed an increase in expression of these genes, thus restoring their
expression to baseline levels in the case of ENG, ITGB1, and ALCAM.
B) Chondrogenic genes (Fig 6B and 6H). The expression of prechondrocyte and chon-
drocyte marker SOX9, chondrocyte markers aggrecan (ACAN), and collagen Type II alpha-1
(COL2A1) were examined in WJMSCs and BMMSCs when cultured in DWJM. ACAN and
COL2A1 were undetected in WJMSCs cultured in DWJM, while ACAN was down-regulated
over time in BMMSCs. SOX9 expression was up regulated in WJMSCs and BMMSCs as com-
pared to baseline value, with BMMSCs showing a 4-fold increase at day 4 and a 15-fold
increase at day 7. Hyaluronan synthase gene (HAS2) expression increased 3-fold at day 4 and
1-fold at day 7 for WJMSCs cultured in DWJM, while BMMSCs showed a decrease in HAS2
expression.
C) Adipogenic genes (Fig 6C and 6I). WJMSCs and BMMSCs demonstrated expression
of the adipogenic differentiation genes—fatty acid binding protein (FABP4) and Peroxisome
proliferator- activation receptor– γ (PPARγ). WJMSCs cultured in DWJM demonstrated a
decrease in the expression of FABP4 and PPARγ, while BMMSCs demonstrated increased
expression of both genes at one week as compared to baseline value. Though these differences
were statistically significant, their biological importance is unclear since the magnitude of
change is small in both cases.
D) Myogenic genes (Fig 6D and 6J). The expression of vimentin (VIM), byglycan (BGN),
desmin (DES), actin alpha 2 (ACTA 2) and collagenase 6 (COL6A1) were studied in WJMSCs
and BMMSCs cultured DWJM. At day 7 of culture, DES was down- regulated in WJMSCs,
while BMMSCs demonstrated no significant change from baseline. However, the decrease in
ACTA2 expression in both the cell lines was noteworthy.
E) Osteogenic genes (Fig 6E and 6K). The expression of runt-related transcription factor
(RUNX2), key to osteoblastic differentiation, was evaluated in WJMSCs and BMMSCs cul-
tured in DWJM. In WJMSCs, the expression of RUNX2 increased 4-fold above a normalized
baseline value of 1.0 at day 4 followed by a significant decrease at day 7. However, in the case
of BMMSCs, expression of RUNX2 increased by 0.5-fold and 1.5-fold over baseline values at
day 4 and 7, respectively. The expression of other osteogenic lineage markers alkaline phos-
phatases (ALPL) and COL1A1 were assessed over time, and it was observed that COL1A1 was
down-regulated in both cell types, while there was no significant difference seen in ALPL levels
Fig 5. Assessing WJMSC viability and proliferation when seeded on DWJM. A) Alamar blue assay to assess the viability of cells
seeded on the matrix and B) Cell migration assay performed using trans-wells with cells alone (control) and cells migrating towards DWJM,
(* Indicates statistical significance p < 0.05).
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in BMMSCs. WJMSCs exhibited a transient 8-fold increase in secreted phosphoprotein 1
(SPP1) expression at day 4, while WJMSCs and BMMSCs demonstrated no significant change
in SPP1 expression at day 7 as compared to baseline value.
F) Apoptosis, proliferation, and other differentiation genes (Fig 6F and 6L). WJMSCs
and BMMSCs cultured in DWJM showed no significant change in the expression of apoptotic
regulator bcl-2-like protein (BAX) at day 7, while proliferation marker MKI67 exhibited signif-
icant decrease in gene expression when compared to the respective baseline values. WJMSCs
demonstrated a significant, albeit small, decrease proliferating cell nuclear antigen (PCNA)
expression at week 7.
3.6 Animal studies
Since our in vitro studies revealed several qualities such as cell attraction and survival, although
at a lower proliferation rate, we performed a set of experiments to demonstrate the ability of
Fig 6. Relative fold change in the mRNA levels of the indicated genes. Panel A-F are WJMSCs on DWJM with A) Cell adhesion genes,
B) Chondrogenic genes, C) Adipogenic genes, D) Myogenic genes E) Osteogenic genes, F) Apoptosis and proliferation genes. Panel G-L
are BMMSCs cultured on DWJM with G) Cell adhesion genes, H) Chondrogenic genes, I) Adipogenic genes, J) Myogenic genes K)
Osteogenic genes, L) Apoptosis and proliferation genes. Relative fold- change is represented on the y-axis and the genes were represented
along the x-axis. The horizontal line represents the gene expression of cells before seeding at Day 0. (* Represents statistical significance
p<0.05.)
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DWJM as a 3D biocompatible scaffold
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DWJM to attract cells in vivo using a murine model using GFP labeled osteocytes. Mice with
defect alone (Fig 7A) were our control group, and mice with defect and DWJM served as the
treatment group (Fig 7B). To study the early and late migration of GFP positive cells into
DWJM, the mice were sacrificed at 24 hours and 14 days, respectively. Structural integrity of
DWJM was evaluated by visual inspection after removing the skin and exposing the defect at
the end of the experiment (Fig 7C). The matrix appeared intact 14 days after surgery (Fig 7C)
and histological examination revealed the presence of cells (Fig 7E, 7H and 7I), some of which
were also GFP positive (Fig 7F and 7J). GFP positive cells were observed in DWJM as early as
24 hours. Since these mice had GFP-labeled osteocytes, the presence of GFP positive cells by
immunohistochemistry suggests that osteocytes from the neighboring bone migrated into the
matrix in a diffuse pattern. Additionally, in vivo live animal imaging system (IVIS) was used to
track GFP-labeled cells (Fig 7D) and it was observed that mice with defect alone exhibited a
lack of GFP/green signal at the defect site. At 14 days, GFP signal was observed at the defect
site in mice with DWJM, while there was no signal in mice with defect only. Thus, the presence
of GFP signal in the area of cranial defect as evidenced by live imaging also shown by presence
Fig 7. WJMSCs transplantation into an in vivo animal model. A) Mice with cranial defect, B) mice with cranial defect and
DWJM, C) mice with cranial defect and DWJM 14 days post-surgery. Arrows in A represent the defect, B shows the DWJM
and C is the defect and DWJM 14 days post-surgery. D) IVIS imaging of the mice post—surgery—1) Mice with DWJM 24
hours post- surgery; 2–6) designates mice 14 days after the surgeries. D2 is mice without any intervention, D3 and D4 are
mice with the defect alone, and D5—D6 represent mice with defect and DWJM. The red circles indicate the defect sites and
the inset images are a higher magnification of the defect site in mice. The green fluorescence signal at the defect site signifies
the migration of the GFP positive cells into the defect. Images E-J represent the histology images of bone specimen with
DWJM 14 days post-surgery, with image E) hematoxylin-eosin stained (H&E) section of DWJM tissue specimen 24 hours
post-surgery, and image F depicts GFP immunohistochemistry staining of the same. Images G-J represent DWJM sample 14
days post-surgery with G, H and I being H&E stained sections of DWJM viewed at different magnifications as indicated in the
figure. J represents the GFP immunohistochemistry of the section in image I. The arrows in image F, J represent GFP positive
cells.
doi:10.1371/journal.pone.0172098.g007
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of GFP labeled cells focally distributed on histological sections of DWJM demonstrate that
DWJM acted as a chemo-attractive and biocompatible scaffold material.
4. Discussion
Although a wide variety of synthetic and natural scaffolds are readily available for tissue engi-
neering applications, natural polymers such as collagen, gelatin, silk, chitosan, and elastin pose
some difficulties with processing, purity, and protein denaturation. As for synthetic materials,
metal alloys are difficult to handle and are not biodegradable [2,3, 19]. Polymers such as poly
lactic-acid (PLLA), polyglycolic acid (PGA), polycaprolactone (PCL), poly lactic acid-co-gly-
colic acid (PLGA) fit the properties of an ideal scaffold, but they are synthetic in origin and
lack biological properties. Therefore, increasing needs to develop an ideal natural scaffold
material [2–7, 20]. In lieu of the advantages and disadvantages of all the natural and synthetic
scaffolds, we believe that DWJM has desirable features since it is a natural scaffold material
that is both biocompatible and biodegradable, while promoting cellular adherence and
proliferation.
Accordingly, we have demonstrated that DWJM is a biocompatible matrix that promotes
WJMSC adhesion, penetration into the matrix in vitro while maintaining cell viability. The
decellularization process adopted in our work resulted in a novel 3D matrix completely devoid
of cells and dsDNA, consistent with current recommendations for tissue decellularization
[21]. In our experiments, we specifically focused on the WJ matrix with total removal of vascu-
lar tissues, allantoic duct, and amniotic epithelium, in contrast to other approaches such as
that proposed by Chan et al. [22].
Mass spectrometry analysis showed a significant residual of important extracellular matrix
proteins such as collagen, fibronectin, lumican, and tenascin. These proteins play an important
role in developing a scaffolding material for bone and cartilage tissue engineering applications.
For example, fibronectin has been shown to enhance the quality of scaffolding material used
for osteogenic differentiation [23]. Also, lumican is a matrix protein that has been correlated
with in vivo bone formation by transplantation of in vitro generated osteospheroids from
human mesenchymal stem cells[24]. TGF-β, identified in DWJM, also plays an important role
in regulating osteogenic differentiation [25] and chondrogenic differentiation of MSCs by
enhancing COL2A1 expression [26]. DWJM also contains sulfated GAGs, which are reported
to enhance chondrogenic [27] and osteogenic differentiation in addition to improving cell-
matrix interactions [28]. GAGs like chondroitin sulfate were also found to enhance the biolog-
ical activity of collagen I scaffolds in supporting chondrocytes [29].
When WJMSCs were uniformly seeded on DWJM, cellular condensations were observed in
some areas of the scaffold. This phenomenon of mesenchymal cell condensation is very similar
to the process observed in early chondrogenesis resulting from cell-cell and cell-matrix inter-
actions[30]. TGF-βI also plays a role in inducing pre-cartilage condensation [31]. Since our
mass spectroscopy identified that DWJM has retained TGF-β and other matrix proteins such
as collagen I, fibronectin, and tenascin,, we postulate that these proteins may have provided
critical cues resulting in the WJMSCs condensation in some areas of DWJM.
The difference in timing of proliferation between WJMSCs/BMMSCs when cultured in 2D
and on DWJM was consistent with an observed decrease in expression of proliferation marker
Ki-67 gene, thereby indicating that MSC proliferation slows down as cells interact with DWJM
scaffolds. Similar observations have been made by other researchers who also demonstrated
that 3D culture conditions were found to slow down cell proliferation [32].
CD 44 is a cell adhesion receptor involved in interacting with multiple ligands such as hya-
luronan, fibronectin and collagens [33]. Although BMMSCs physiologically do not express CD
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 19 / 23
44 in human or mice, Qian et al demonstrated that in vitro culture of these MSCs could result
in CD 44 expression. [34–36]. In our study, we observed increased expression of CD 44 gene
in WJMSCs and BMMSCs when cultured in DWJM for 7 days. Since the decellularization pro-
cess adopted in this work abundantly retained hyaluronic acid in DWJM, the induction of CD
44 in both the MSCs cultured on DWJM could possibly be associated with anchoring of the
cells to hyaluronic acid in the matrix. Cell surface markers such as Thy1, endoglin, ALCAM,
CD 44 and VCAM have been used to isolate homogeneous MSC populations [34,37, 38].
When BMMSCs were cultured over DWJM, no significant changes in gene expression were
noticed for cell adhesion molecules Thy 1 and ALCAM, while WJMSCs showed decreased
expression of these genes. These subtle differences in the expression of the adhesion genes
between WJMSCs and BMMSCs could be attributed to WJMSCs being native to the Whar-
ton’s jelly matrix, while BMMSCs were introduced into a new environment.
Our gene expression studies show no clear differentiation pattern for WJMSCs when cul-
tured in DWJM. Though RUNX2 expression is increased in BMMSCs cultured in DWJM,
which is a marker of in MSC commitment to osteogenic differentiation [39, 40], SOX9 expres-
sion was also increased, which is an inhibitor of RUNX2, thus blocking osteoblastic matura-
tion; which typically occurs during chondroprogenitor fate determination [41]. In an attempt
to understand SOX9 and RUNX2 roles in osteogenesis in MSCs, Loebel et al. has shown that
the RUNX2/SOX9 ratio can be used to screen for osteogenesis during in vitro osteogenic dif-
ferentiation of MSCs [42]. In our experiments, the ratio of RUNX2/SOX9 showed the same
decreasing trend for WJMSCs and BMMSCs cultured over DWJM (WJMSCs: 3.26 at day 4 to
0.62 at day 7; BMMSCs: 0.34 at day 4 to 0.16 at day 7) thereby indicating non-commitment to
osteogenic lineage in either case. Several researchers have already demonstrated the potential
of WJMSCs differentiation into myogenic lineage both in vitro and in vivo [43, 44]. Biglycan
(BGN), a critical protein for collagen fibril assembly and muscle regeneration and alpha
smooth muscle actin 2 (ACTA 2), a protein essential for maintaining cell motility, structure
and integrity were significantly down-regulated in both types of MSCs. Accordingly, no line-
age specific differentiation towards osteogenic, chondrogenic, myogenic or adipogenic genes
was observed.
Thus, we demonstrate that DWJM is a biocompatible matrix with cell attraction properties.
This is further confirmed in our animal experiments, where we have demonstrated GFP
labeled osteocytes migration into the matrix as early as 24 hours by immunohistochemistry,
and at 2 weeks by in vivo live imaging. In addition to biocompatibility, DWJM has favorable
surgical characteristics like porosity, elasticity, and compressibility, which make it easy to con-
figure in irregular or curved shapes necessary for scaffold structure. Thus, based on all these
characteristics, we envision that DWJM scaffolds will have several potential applications
related to tissue engineering.
5. Conclusions
In this manuscript we have successfully isolated, decellularized, and fully characterized the
human WJ matrix. We have shown that this naturally obtained matrix can be made completely
devoid of cells, yet still comprised of glycosaminoglycans especially rich in hyaluronic acid and
several other key extracellular matrix proteins. We also have demonstrated that DWJM is a
biocompatible matrix that allows for cellular adherence, penetration, growth and proliferation
with suitable/acceptable mechanical properties in vitro and in vivo. In sum, this paper presents
DWJM as a novel and natural 3D scaffold that can be used for tissue engineering and regenera-
tive medicine applications.
DWJM as a 3D biocompatible scaffold
PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 20 / 23
Supporting information
S1 Video. Time-lapse imaging of WJMSCs seeded on DWJM. Time-lapse imaging of
WJMSCs labeled in burgundy and DWJM labeled in green color (WJMSCs on DWJM are in
yellow). Panel on the top left represents bright field image of WJMSCs on DWJM, top right
represents labeled WJMSCs, bottom left are labeled DWJM, and bottom right shows labeled
WJMSCs on DWJM. WJMSCs can be seen proliferating and migrating inside and outside the
DWJM. Imaging was performed over 18 hours. (Scale bars represent 100 μm).
(AVI)
S2 Video. Time-lapse imaging of WJMSCs on DWJM in different Z planes. The three panels
represent WJMSCs at three different depths in the matrix as Z − 1, Z 0 and Z + 1. Scale
bar = 100 μm. The movies on the top panel are labeled WJMSCs on labeled DWJM, while the
videos on the bottom panel are bright field images of WJMSC on DWJM. The full Z volume
for the acquisitions was 225μ through 7 steps of 37.5μ per Z-step/plane.
(AVI)
Acknowledgments
We thank Drs. CD Little and BJ Rongish, Department of Anatomy and Cell Biology, KUMC,
for advice and use of their time-lapse instrumentation, supported by the The G. Harold and
Leila Y. Mathers Foundation. We would also like to thank Dr. David W Rowe, University of
Connecticut Health Center and Dr. Lynda Bonewald, University of Missouri Kansas City, for
their generous gift of GFP mice. We also thank Dr. Sonia Rawal, Peggy Keefe, Yinghua Xiao,
Barbara Fegley, Dr. Yi Feng, Mingcai Zhang, and Dr. Dandan Li for their help with some of
the experiments and Da Zhang for his help with microscopy imaging.
Author Contributions
Conceptualization: OSA RAH MSD.
Formal analysis: SJ CF MF.
Funding acquisition: OSA.
Investigation: SJ CF EB MF AA MTV AJM.
Methodology: SJ AJM OSA RAH MSD.
Project administration: SJ OSA.
Resources: RAH JW MSD OSA.
Supervision: OSA MSD RAH JW.
Validation: SJ GC CF EB MF MTV AA AJM.
Visualization: SJ AJM MF MTV AA.
Writing – original draft: OSA.
Writing – review & editing: SJ GC CF EB MF MTV AA AJM JW MSD RAH OSA.
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PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 23 / 23

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Decellularized whartons jelly_from_human_umbilical_cord_as_a_novel_3_d_scaffolding_material_for_tissue_engineering_applic

  • 1. RESEARCH ARTICLE Decellularized Wharton’s Jelly from human umbilical cord as a novel 3D scaffolding material for tissue engineering applications Sushma Jadalannagari1,2 , Gabriel Converse1,3 , Christopher McFall3 , Eric Buse3 , Michael Filla4 , Maria T. Villar5 , Antonio Artigues5 , Adam J. Mellot6 , Jinxi Wang7 , Michael S. Detamore8 , Richard A. Hopkins1,3 , Omar S. Aljitawi1,2 * 1 Department of Bioengineering, University of Kansas, Lawrence, Kansas, United States of America, 2 Department of Hematology/Oncology, University of Kansas Medical Center, Kansas City, Kansas, United States of America, 3 Cardiac Regenerative Surgery Research Laboratories, Children’s Mercy Hospital and Clinics, Kansas City, Missouri, United States of America, 4 Department of Anatomy and Cell Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America, 5 Department of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, Kansas, United States of America, 6 Department of Plastic Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America, 7 Department of Orthopedic Surgery, University of Kansas Medical Center, Kansas City, Kansas, United States of America, 8 Department of Chemical and Petroleum Engineering, University of Kansas, Lawrence, Kansas, United States of America * [email protected] Abstract In tissue engineering, an ideal scaffold attracts and supports cells thus providing them with the necessary mechanical support and architecture as they reconstruct new tissue in vitro and in vivo. This manuscript details a novel matrix derived from decellularized Wharton’s jelly (WJ) obtained from human umbilical cord for use as a scaffold for tissue engineering application. This decellularized Wharton’s jelly matrix (DWJM) contained 0.66 ± 0.12 μg/mg sulfated glycosaminoglycans (GAGs), and was abundant in hyaluronic acid, and completely devoid of cells. Mass spectroscopy revealed the presence of collagen types II, VI and XII, fibronectin-I, and lumican I. When seeded onto DWJM, WJ mesenchymal stem cells (WJMSCs), successfully attached to, and penetrated the porous matrix resulting in a slower rate of cell proliferation. Gene expression analysis of WJ and bone marrow (BM) MSCs cul- tured on DWJM demonstrated decreased expression of proliferation genes with no clear pattern of differentiation. When this matrix was implanted into a murine calvarial defect model with, green fluorescent protein (GFP) labeled osteocytes, the osteocytes were observed to migrate into the matrix as early as 24 hours. They were also identified in the matrix up to 14 days after transplantation. Together with these findings, we conclude that DWJM can be used as a 3D porous, bioactive and biocompatible scaffold for tissue engi- neering and regenerative medicine applications. PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 1 / 23 a1111111111 a1111111111 a1111111111 a1111111111 a1111111111 OPEN ACCESS Citation: Jadalannagari S, Converse G, McFall C, Buse E, Filla M, Villar MT, et al. (2017) Decellularized Wharton’s Jelly from human umbilical cord as a novel 3D scaffolding material for tissue engineering applications. PLoS ONE 12 (2): e0172098. doi:10.1371/journal.pone.0172098 Editor: Aditya Bhushan Pant, Indian Institute of Toxicology Research, INDIA Received: September 14, 2016 Accepted: January 31, 2017 Published: February 21, 2017 Copyright: © 2017 Jadalannagari et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Data Availability Statement: All relevant data are within the paper and its Supporting Information files. Funding: The authors received no specific funding for this work. Competing interests: As employees of the Leibniz Institute for Prevention Research and Epidemiology – BIPS, KT, BK, and TS have performed research studies sponsored by pharmaceutical companies (Bayer-Schering, Celgene, GSK, Mundipharma, Novartis, Purdue, Sanofi-Aventis, Sanofi-Pasteur,
  • 2. 1. Introduction Disease or trauma to the human body leads to damage and degeneration of tissues, thereby requiring their repair, replacement or regeneration. Tissue regeneration requires an optimal combination of cells, scaffolds, appropriate media and growth factors. The properties of an ideal scaffold for tissue regeneration are high porosity, biocompatibility, biodegradability and mechanical properties consistent with and suitable to the location of implant [1]. Current treatment options for tissue regeneration involve the use of autografts or allografts. Neverthe- less, autografts can be difficult to obtain due to expensive and painful procedures, while allo- grafts pose the risk of infection and immune rejection. Several types of scaffolds from natural or synthetic sources (polymers, ceramics, and composites) have been developed for tissue regeneration over the years [1]. Since, such scaffolding is associated with material-specific lim- itations, there is growing interest in the use of biocompatible, natural bioactives, or synthetic materials as alternatives. [2–8]. Wharton’s jelly (WJ), is a firm mucoid connective tissue surrounding umbilical cord vessels [9], possessing many unique biochemical characteristics required for a scaffold. Mesenchymal stem cells (MSCs) are derived from WJ and immersed in ground substance that is rich in colla- gen, hyaluronan, and also containing numerous sulfated glycosaminoglycans (GAGs) [9]. MSCs widely express the archetypal hyaluronan receptor, CD44, also expressed on osteocytes, chondrocytes, and hematopoietic marrow cells [10]. WJ is a rich source of peptide growth fac- tors, notably insulin-like growth factor-1 (IGF-1) and to a lesser extent platelet-derived growth factor (PDGF), [11] both of which are linked to controlling cell proliferation, differentiation, synthesis and remodeling of the extracellular matrix [12]. This work is based on a hypothesis that customized cell removal procedures can effectively process WJ to produce a decellularized, bioactive Wharton’s jelly matrix (DWJM). We also postulated that DWJM would provide a 3D environment specifically well suited to support undifferentiated mesenchymal cell culture. This paper details the decellularization processes used to obtain this matrix, in addition to its characterization and analysis of its structural con- tents. Here, we also demonstrate that WJ and bone marrow MSCs (BMMSCs) can be seeded and cultured in vitro upon this matrix. We further studied the gene expression profiles of these MSCs when seeded on our 3D scaffold, and also assessed the biocompatibility of our matrix in vivo using a murine bone defect model. 2. Materials and methods Human umbilical cord collection, WJMSCs and WJ tissue harvest followed by decellularization were performed in accordance with the approved University of Kansas Medical Center’s Insti- tutional Review Board protocol # HSC 12129 (title—Decellularization of umbilical cord Whar- ton’s jelly for tissue regenerative applications including avascular necrosis) at the University of Kansas Medical Center. Consents were collected from donors by obtaining their written signa- tures on the approved informed consent form. Umbilical cords were immediately collected from consented mothers with full-term pregnancy after normal vaginal delivery. The umbilical cord was placed in a transport solution made of Lactated Ringer’s solution supplemented with penicillin 800 U/mL (Sigma-Aldrich, St. Louis, MO), streptomycin 9.1 mg/mL (Sigma-Aldrich), and amphotericin 0.25 mg/mL (Sigma-Aldrich) and immediately refrigerated at 4˚C. The decel- lularization process was initiated within 72 hours of umbilical cord collection. 2.1 Decellularization process The decellularization procedure has recently been described in our earlier publication [13]. Briefly, fresh human umbilical cords were transported from the delivery room in a transport DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 2 / 23 Stada, and Takeda) unrelated to this study. This does not alter our adherence to PLOS ONE policies on sharing data and materials.
  • 3. solution at 4˚C. Umbilical cords were dissected in a laminar flow safety cabinet, by separating the matrix into large oval pieces away from the surrounding membranes and vascular struc- tures. They were then subjected to two cycles of osmotic shock, alternating with a hypertonic salt solution containing sodium chloride, mannitol, magnesium chloride, and potassium chlo- ride with an osmolarity of approximately 1,275 mOsm/L, and against a hypotonic solution of 0.005% Triton X-100 in ddH2O centrifuged at 5,000 rpm at 4˚C. After two cycles of osmotic shock, the tissues were subjected to an anionic detergent (sodium lauryl) and, sodium succinate (Sigma L5777), then switching to a recombinant nucleic acid enzyme, (Benzonase™) in buffered (Tris HCl) water for 16 hours. Following this, an organic solvent extraction with 40% ethyl alcohol was performed for 10 minutes at 5,000 rpm in the centrifuge at 4˚C. All of the detergent and other processing residuals were then bound and removed utilizing ion exchange beads (iwt-tmd (Sigma), XAD-16 Amberlite beads (Sigma), and Dowel Monosphere 550A UPW beads (Supelco)) in a reciprocating flow-through glass system at room temperature in ddH2O for 30 hours. The decellularized matrix was cryo- preserved using 10% human recombinant albumin (Novozymes) and 10% DMSO (Sigma) solution in standard RPMI media, employing a material-specific computer controlled freezing profile developed to freeze at -1˚C/minute to -180˚C [14]. 2.2 Isolation, expansion, and WJMSCs seeding onto DWJM a. Preparation of DWJM for seeding with WJMSCs. Freshly obtained fragments of DWJM were transferred to a large petri dish and covered with phosphate buffered saline (PBS). DWJM pieces (5–7 mm in diameter) were obtained using a sterile 5–7 mm skin punch biopsy kit. The resulting DWJM pieces were cylindrical in shape and with non-uniform heights varying between 2–3 mm. DWJM scaffold volume obtained was approximately 72 mm3 . From this point on, these pieces of DWJM will be referred to as “DWJM scaffolds”. DWJM scaffolds were transferred using sterile forceps to a large petri dish and washed twice with PBS then transferred to non-tissue culture treated plates at the time of seeding. b. MSC isolation and expansion. i. WJMSCs—WJMSCs were isolated and expanded according to the procedures described by Wang et al [15]. Briefly, the outer layer of the cord was carefully removed and the cord was cut into smaller segments. The blood vessels were dissected from these cord segments and then cut into smaller pieces and digested with Collagenases (Worthington Biochemical Corpo- ration, Lakewood, NJ) in low glucose Dulbecco’s Modified Eagle’s Medium (DMEM) (Sigma- Aldrich) with 10% Fetal Bovine Serum (FBS) (Atlanta Biologics, Atlanta, GA) and 1% penicil- lin/streptomycin (Sigma-Aldrich) overnight at 37˚C to obtain WJMSCs. The WJMSCs were passaged and maintained in this low glucose DMEM-10% FBS-1% penicillin/streptomycin medium with passages 4–9 being used for the following experiments. ii. BMMSCs—BMMSCs were isolated from bone marrow aspirates of healthy consented donors at University of Kansas Medical Center (HSC # 5929). The cells were isolated following standard ficoll density gradient separation method (Lymphoprep, Stem Cell Technologies, Vancouver, BC). The isolated cells were maintained in high glucose DMEM (Sigma-Aldrich), 20% FBS (Atlanta Biologics) and 1% penicillin/streptomycin (Sigma-Aldrich) at 37˚C, under 5% CO2 and 90% humidity. c. MSC characterization and phenotyping. The MACS Miltenyi Biotec MSC human phenotyping kit was used to characterize the expanded WJMSCs and BMMSCs, and analyzed by BD Flow Cytometer LSR2 (Beckton Dickinson). MSCs isolated from human umbilical cord and bone marrows were stained for CD14, CD20, CD34, CD45, CD73, CD90 and CD105. DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 3 / 23
  • 4. d. MSC seeding onto DWJM. For each set of seeding experiments, Single-donor (n = 1) WJMSCs or BMMSCs were used. 1 x 106 MSCs suspended in 50-μL culture medium were seeded on each DWJM scaffold (average seeding density 1.4 x 104 –4 x 104 /mm3 per DWJM scaffold) in a 48-well plate, followed by addition 1 mL of culture medium per well. For the gene expression studies, 0.25 x 106 –1 x 106 WJMSCs or BMMSCs from passages 4–9 were seeded on DWJM in a 24-well non tissue culture treated plate (Corning Inc., Corn- ing, NY) for 4 to 7 days and cultured in their respective media. 2.3 Characterization of DWJM a. DNA quantification. DNA in the samples was isolated using the Qiagen DNeasy Blood and Tissue Kit (Dusseldorf, Germany) according to the manufacturer’s instructions. Pico Green dye (Molecular Probes, Eugene, OR) was used as a label and the extracted DNA quanti- fied fluorometrically using Quant-iT dsDNA HS (high sensitivity) Kit (Invitrogen, Carlsbad, California). The amount of extractable DNA was calculated as wet weight tissue and expressed as a percent reduction in extractable DNA relative to that for non- decellularized tissue. All analyses were run in triplicate. b. Glycosaminoglycan’s (GAGs) content analysis. The Blyscan assay (Biocolor Life Sci- ences, UK) was used according to the manufacturer’s instructions for analysis of sulfated gly- cosaminoglycan content. Tissue samples from native umbilical cord WJ and DWJM were analyzed and the results were reported as μg/mg of glycosaminoglycan per wet tissue weight. c. Protein identification by mass spectrometry. DWJM samples from two different umbilical cords samples were analyzed following two methods of protein extraction. For the first method, DWJM was snap-frozen using liquid nitrogen, tissue homogenized, and sus- pended in WJMSC culture medium as described above. The second method used the Ready Prep Protein Extraction Kit with zwitterion detergent ASB-14 as a solubilizing agent (Bio-Rad Laboratories, Inc., Hercules, CA). This step was fol- lowed by a cleanup step to free the proteins of ionic contaminants by selective precipitation of detergents, lipids using Ready Prep 2-D Cleanup Kit (Bio-Rad Laboratories, Inc., Hercu- les, CA). The protein pool present in the extracts was denatured in 6M guanidine hydro- chloride, reduced, alkylated, and subsequently digested for 18 h with sequencing grade trypsin (12 ng/L, Promega, Madison, WI) at 37˚C. Following enzymatic digestion, the extracted peptides were concentrated to a final volume of 50 μL on a Centrivac Concentra- tor (Labconco, Kansas City, MO). The peptide extracts were analyzed by reversed phase chromatography using a 2D NanoLC HPLC (Eksigent Technologies, Dublin, CA) coupled to a Linear Thermo Electron Quadripole Electron Trap—Fourier Transformation (LTQ FT) mass spectrometer (Thermo Fisher Scientific, Waltham, MA). The mass spectrometer was controlled by the Xcalibur software to perform continuous mass scan on the FT in the range of 400–1900 m/z at 50,000 resolutions, followed by MS/MS scans on the ion trap of the six most intense ions. All tandem mass scans were searched using the Proteome Discoverer (version 1.3, Thermo Fisher) against a human protein database using trypsin cleavage speci- ficity, with a maximum of 2 missed cleavages. The following variable modifications were selected: oxidation of M (methionine), deamidation of N (asparagine), and Q (glutamine), and carboxymethylation of C (cysteine) selected as fixed modifications, with a maximum of 4 modifications/peptides allowed. Estimation of false discovery rate (FDR) was conducted by searching all spectra against a decoy database. For protein identification an FDR >1% (high confidence) was defined for all peptides of interest, which were subsequently reviewed manually. DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 4 / 23
  • 5. 2.4 Evaluating seeded WJMSC adherence to and penetration of DWJM scaffolds a. Confocal microscopy. To assess WJMSCs attachment to DWJM scaffolds after cell seeding and culture, scaffolds were transferred to a viewing chamber for confocal microscopy examination using a Fluoview scanning laser confocal microscope (Olympus, Center Valley, PA). Prior to viewing, the seeded DWJM scaffolds were rinsed twice with PBS and incubated with 1 mL culture medium containing 2 μg Calcein stain (Molecular Probes, Eugene, OR). Calcein is a cell-permeant dye that is converted to green-fluorescent Calcein when in live cells. Using this stain, we tracked live WJMSCs after their being seeded onto DWJM scaffolds at 2, 24 and 48-hour intervals. b. Dual beam electron microscopy. MSCs were seeded on DWJM as described above and cultured in their appropriate media for 7 days. The matrix with cells was collected after 24 hours and at day 7 and was fixed overnight in 4% paraformaldehyde (VWR, Randor, PA) in PBS at 4˚C. Tissue specimens were washed three times in PBS then stained with 2% osmium tetroxide (OT) for 24 hours to label lipids. Since OT gives off a strong electron backscatter sig- nal, OT- stained samples were again washed three times for 10 minutes in PBS. All samples were gradually dehydrated with ethanol and cleared in xylene, before being embedded in par- affin. Samples were sectioned to a thickness of 10 μm or 20 μm using a microtome (Leica, Buf- falo Grove, IL) and mounted on Super Frost glass slides (Thermo Fisher, Waltham, MA). OT- stained samples were deparaffinized using two 3 minute washes of xylene and critical-point dried in 100% ethanol using an Autosamdri 815B super-critical dryer (Tousimis, Rockville, MD) Samples were sputter-coated with 5 nm of copper using a Q150T Turbo-Pumped Sputter Coater (Quorum Technologies, West Sussex, and United Kingdom) and then imaged on a Versa 3D Dual Beam electron microscope (FEI, Hillsboro, OR) at a voltage of 30 kV. An Ever- hart-Thornley detector (ETD) and circular backscatter (CBS) detectors were used to detect secondary electrons and backscatter electrons, respectively. c. Live cell imaging. DWJM scaffolds of 30μ thickness were placed in a 12 well plate and the matrix blocked with 3% BSA for 2 hours and subsequently incubated with 3 μL anti-fibro- nectin antibody [F1] (Alexa Fluor1 488) (Abcam, Cambridge, MA) in the dark for 12–15 hours at 4˚C. Immediately prior to being seeded onto DWJM scaffolds, the WJMSCs were cul- tured in a 12 well plate and labeled using the CellVue1 Burgundy Labeling Kit (Affymetrix eBioscience, Santa Clara, CA) according to the manufacturer’s instructions. Briefly, 2.5–5 x 105 WJMSCs were seeded on the labeled matrix, and cultured for 24 hours at 37˚C. Imaging was made on a Leica 10X HC PL Fluotar 506505 objective of a semi-automated Leica DMIRE2 inverted epifluorescent microscope outfitted with a Ludl Bioprecision motorized stage, Sutter Instruments Xenon Lamphouse with shutters and a Retiga SRV CCD camera controlled by customized TiLa KU (KU Time Lapse) acquisition and image processing software. Regions under study/interest were imaged in Bright field, GFP (Chroma 41001 HQ480/40 excitation HQ535/50 Emission) and CY5 (Chroma 49006 ET620/60 excitation, ET700/75 emission). DWJM interaction with WJMSCs was imaged at 15-minute intervals over an 18-hour period. d. Scanning electron microscopy (SEM). The DWJM scaffolds were fixed in 2% glutaral- dehyde for SEM processing. The fixed samples were washed with PBS for 10 minutes, placed into buffered 1% osmium tetroxide for 1 hour, and then washed 3 times each for 10 minutes in distilled water. The samples were then dehydrated through a graded series of ethanol at con- centrations 30%, 70%, 80%, 95%, and 100% for 15 minutes each. Following this, the samples were critical point dried in CO2 in a model EMS 850 dryer (Electron Microscopy Sciences, Hatfield, PA), then mounted onto aluminum and coated with gold in a Pelco SC-6 sputter coater. The samples were finally viewed using a Hitachi S-2700 scanning electron microscope. DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 5 / 23
  • 6. e. Transmission electron microscopy (TEM). Scaffolds for TEM were rinsed in a buffer prior to fixing in 1% to 2% osmium tetroxide for 1 hour. After osmication, the scaffolds were dehydrated in an ethanol series of 30%, 70%, 80%, 95%, and 100%, 10–15 minutes for each concentration, then placing them in propylene oxide (PO) twice for 10 minutes. To enhance tissue infiltration, the scaffolds were then placed in an equal mixture of resin and PO over- night. At this point, the 1:1 mixture mix was removed from the tissue and fresh 100% resin mixture added to the sample, and allowed to sit on a platform rocker for at least 30 min. The samples were subsequently covered in resin and finally were placed in 60˚C oven overnight to cure the resin. The samples were sectioned afterwards using a Leica UCT ultra microtome slic- ing at 80 nm in thickness, contrasted with 4% uranyl acetate and Sato’s Lead Citrate and viewed at 80 KV with a JOEL JEM-1400 TEM. 2.5 Histology and immunohistochemistry DWJM scaffolds were fixed in either 10% formalin or 4% paraformaldehyde, embedded in par- affin, sectioned, and stained. Slides were reviewed using an Olympus BX40 microscope and pictures were acquired using a DP72 digital camera (Center Valley, PA). a. Gomori’s trichrome staining. Tissue sections were stained with trichrome stain kit— Richard Allan 87020 (Thermo Fisher, Waltham, MA) according to the manufacturer’s instruc- tions. Using this stain, the nuclei were stained bluish-black to black, cytoplasm, muscle fibers and keratin stained red, while collagen and mucus stained blue. b. Immunohistochemistry. Immunohistochemistry staining was performed at room tem- perature using an IntelliPATH FLX™ automated stainer (Biocare Medical, Concord, CA) at room temperatures. Briefly, after deparaffinization, sampleswere blocked in 3% hydrogen per- oxide for 10 minutes, rinsed and blocked in strepatividin/biotin (Vector Laboratories, Burlin- game, CA.). The samples were again rinsed and stained for 60 minutes at room temperature with 1:200 dilution hyaluronic acid binding protein (RMD Millipore, Danvers, MA) followed by a 15 minute labeling with horse radish peroxidase (HRP) (Dako, Carpinteria, CA). Chro- mogenic detection of the enzyme conjugate was made using 3,3’ diaminobenzidine (DAB) (DAkp, Carpinteria, CA) when applied for 5 minutes with slides counterstained with hematoxylin. For collagen immunohistochemistry, after deparaffinization and rehydration, the tissue sec- tions were incubated with a primary antibody against Collagen I (Abcam, Cambridge, MA). Following a 30-minute incubation at room temperature and rinsing, the sections were incu- bated with secondary antibody, goat anti-rabbit HRP-polymer MACH 2 rabbit HRP-polymer (Biocare Medical, Concord, CA). Finally, collagen staining was visualized by DAB (Dako, Car- pinteria, CA) and the nuclei as counterstained by hematoxylin. Green fluorescent protein (GFP) immunohistochemistry staining was performed by incu- bation with primary monoclonal goat-anti GFP antibody (1:100 dilution for 45 minutes), fol- lowed by secondary MACH2 rabbit antibody (CST, Cell Signaling Technology, Danvers, MA) MACH 2 for 45 minutes on a Clinical intelliPATH FLX automated slide stainer. 2.6 Evaluating seeded WJMSC proliferation The alamarBlue1 (AB) cell viability assay (ThermoFisher Sci, Waltham, USA) was used to assess WJMSC viability and proliferative response following seeding onto DWJM by correlat- ing fluorescent or absorbance signal related to metabolic activity. DWJM scaffold pieces (7 mm in diameter and 2–3 mm in height) were seeded with the expanded human WJMSCs at 1 x 106 cells onto each DWJM scaffold. For controls, 1 x 106 cells per well were cultured as a DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 6 / 23
  • 7. monolayer in each well of a 24-well plate. AB was assessed at 24 and 48 hours as well as 1 week following WJMSC seeding. These experiments were performed in triplicate. 2.7 Evaluating WJMSC migration toward DWJM by the trans-well migration assay WJMSC suspension at 3–7 x 105 was loaded to the upper chamber of Transwell set (Costar, Corning Inc.) and the minced DWJM tissue in low glucose DMEM with 10% Fetal Bovine Serum (FBS) and 1% Penicillin/Streptomycin added to the lower chamber. After 4 hours, the trans-wells were removed and the migrated cells counted for viability using a Vi-cell (Beck- man-Coulter). All the experiments were conducted in triplicate. 2.8 Molecular studies a. RNA extraction from cells. WJMSCs and BMMSCs were cultured as a monolayer (2D) or on DWJM (3D) as described in section 2.2d for 7 days. The cells were collected at day 0 (monolayer prior seeding DWJM), day 4 and day 7 after seeding onto the matrix. WJMSCs were harvested from the scaffolds following overnight digestion with Collagenase II. The MSCs were washed twice with PBS and centrifuged at 13000 rpm, for 20 minutes at 4˚C to obtain a cell pellet which was suspended in 1 mL monophasic phenol guanidine isothiocyanate (Trizol) (Life technologies) and stored at -80˚C until further processing. Once all the samples were collected, RNA was extracted using the standard procedure according to the manufac- turer (Life Technologies, Carlsbad, CA). Briefly, the RNA was separated from the aqueous phase using 0.2 mL chloroform, then 0.7 volumes of isopropanol added with centrifugation to precipitate RNA. The RNA pellet was washed twice with 75% ethanol and dissolved in 30–50 μL nuclease-free water. RNA was quan- tified by Nano drop spectrophotometer 8000 (Thermo Fisher Scientific). First, 1.5μg of RNA was treated and isolated using the DNA-free™ DNase l kit (Life Technologies). Then a high capacity cDNA reverse transcription kit (Applied Biosystems) was used to generate cDNA from the extracted total RNA samples by a Bio-Rad T100 thermal cycler. b. Quantitative real-time PCR analysis. The quantitative real-time PCR (qPCR) reac- tions (20 μL) were performed with the TaqMan gene expression master mix (Life Technolo- gies), and TaqMan array 96 well plates (Applied Biosystems, Foster City, CA) using the StepOnePlus™ real-time PCR system (Applied Biosystems). The primers used are described in Table 1. The qPCR reactions were performed in triplicate. StepOnePlus™ real-time PCR system (Applied Biosystems) was used for qPCR. Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) was used as an internal control to normalize the samples to obtain cycle delta threshold over background (ΔCT). The delta delta CT method (2-ΔΔCT ) was used to analyze the relative gene expression levels. 2.9 Animal studies 2.9.1 Animal surgeries. Prior to the animal studies, DWJM scaffolds were washed twice in PBS and pre-incubated in low glucose DMEM (Sigma-Aldrich) with 10% FBS (Atlanta Bio- logics) and 1% penicillin/streptomycin (Sigma-Aldrich) for 24 hours at 37˚C, 5% CO2 and 90% relative humidity. After incubation, DWJM scaffolds were washed multiple times in PBS to remove excess media before transplantation. All the animal experiments were performed in strict accordance with the approved University of Kansas Medical Center Institutional Animal Care and Use Committee (IACUC) protocol # 2013.2158. All the animal studies were per- formed on transgenic 10kB DMP1—Cre floxed mice (6–8 week old) expressing green fluores- cent protein (GFP)[16]. Mice were anesthetized with intraperitoneal injection (IP) of DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 7 / 23
  • 8. ketamine (90–150 mg/kg) (Vedco) and xylazine (7.5–16 mg/kg). Buprenorphine SR (0.15–0.5 mg/kg) (Zoopharm pharmacy) was given subcutaneously immediately before the surgical pro- cedure for analgesia. One midline skin incision of approximately 1cm in length was made on the dorsal surface of the cranium, followed by the separation of skin and periosteum. A full- thickness parietal bone defect (5.0-mm in diameter) was implemented with a trephine bur (Fine Science Tools, Foster City, CA) attached to an electric Dremell hand piece (Ideal micro drill, Harvard apparatus, Holliston, MA). The defect was left empty (n = 4) or filled with the decellularized matrix (n = 4) and the skin incision was sutured with 5–0 coated Vicryl (polyga- lactin 910) (Ethicon™, Johnson and Johnson Co., New Brunswick, NJ). Heat was provided dur- ing the entire procedure and recovery by circulating warm water blankets to protect the animals from hypothermia. Post—surgery, the animals were monitored for signs of abnormal behavior, paralysis, or infection at the surgical site such as swelling, redness and discharge, and checked daily for 3 days, followed by once every other day for the duration of the study. Ani- mals with cranial defects, and not receiving an implant served as controls. Craniotomy defects in mice were either left un-implanted (control) or implanted with DWJM to study the cellular migration and localization by observing GFP expression. The mice were humanely sacrificed after 14 days by carbon dioxide euthanasia as the primary method of euthanasia, followed by decapitation as the secondary method in accordance with the above-mentioned institutional IACUC protocol. Table 1. Real time RT-PCR TaqMan primers and their description. Gene symbol Detector Gene name GAPDH GAPDH-Hs99999905_m1 Glyceraldehyde-3-phosphate dehydrogenase ACAN ACAN-Hs00153936_m1 Aggrecan SOX9 SOX9-Hs00165814_m1 SRY (sex determining region Y)-box 9 COL2A1 COL2A1-Hs00264051_m1 Collagen, type II, alpha 1 ALPL ALPL-Hs01029144_m1 Alkaline phosphatase, liver/bone/kidney RUNX2 RUNX2-Hs00231692_m1 Runt-related transcription factor 2 ITGB1 ITGB1-Hs00559595_m1 Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) CD44 CD44-Hs01075861_m1 CD44 molecule (Indian blood group) THY1 THY1-Hs00174816_m1 Thy-1 cell surface antigen ENG ENG-Hs00923996_m1 Endoglin ALCAM ALCAM-Hs00977641_m1 Activated leukocyte cell adhesion molecule CD14 CD14-Hs00169122_g1 CD14 molecule MKI67 MKI67-Hs01032443_m1 Antigen identified by monoclonal antibody Ki-67 BAX BAX-Hs00180269_m1 BCL2-associated X protein VIM VIM-Hs00185584_m1 Vimentin ACTA2 ACTA2-Hs00426835_g1 Actin, alpha 2, smooth muscle, aorta SPP1 SPP1-Hs00959010_m1 Secreted phosphoprotein 1 COL1A COL1A1-Hs00164004_m1 Collagen, type I, alpha 1 COL4A1 COL4A1-Hs00266237_m1 Collagen, type IV, alpha 1 COL6A1 COL6A1-Hs01095585_m1 Collagen, type VI, alpha 1 DES DES-Hs00157258_m1 Desmin HAS2 HAS2-Hs00193435_m1 Hyaluronan synthase 2 BGN BGN-Hs00156076_m1 Biglycan VCAM1 VCAM1-Hs01003372_m1 Vascular cell adhesion molecule 1 NOS3 NOS3-Hs01574659_m1 Nitric oxide synthase 3 (endothelial cell) PCNA PCNA-Hs00427214_g1 Proliferating cell nuclear antigen doi:10.1371/journal.pone.0172098.t001 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 8 / 23
  • 9. 2.9.2 In vivo IVIS imaging. Mice were anaesthetized with isofluorane gas prior to imag- ing at 24 and 48 hours by an IVIS station (Perkin Elmer), and then euthanized according to protocol. 2.9.3 Tissue samples. Cranial samples with the matrix were collected in 10% phosphate buffered formalin (Newcomen Supply) within 24 hours. Tissue specimens for the animal study were decalcified using the Rapid Bone Decalcifier solution (American MasterTech) for 5–10 minutes, paraffin embedded, sectioned vertically, and stained as described above. 2.10 Statistical analysis All data were expressed as means ± standard error of mean (SEM) using a threshold of p 0.05 determined statistically significant, and analyzed by the Student’s t-test, two-way analysis of variance (ANOVA), with post-hoc Bonferroni, or non-parametric Man-Whitney U testing. A threshold of p 0.05 determined statistical significance. The statistical analyses were performed utilizing Graph Pad Prism software version 6 (Graph Pad Software, Inc.). 3. Results 3.1. Characterization of DWJM scaffold structure, biochemical components, and biomechanics DWJM scaffolds were prepared from the isolated and decellularized matrix as shown in Fig 1A. Various methods were used to test the effectiveness of the decellularization process for these scaffolds. Histologically: DWJM was porous and devoid of intact cells, nuclei or other cellular components (Fig 1B). Trichrome staining of the human umbilical cord (Fig 1D) shows collagen-rich extracellular matrix in blue, nuclei/cells in dark blue/black distributed in the matrix and blood vessel wall, and blood in red. Since blood vessels are removed and the cells are lost during the decellularization process, the matrix obtained is rich in blue stain represent- ing collagen (Fig 1E). Immunohistologically: staining for collagen (Fig 1C) and hyaluronic acid (Fig 1F) demonstrate that DWJM is rich in collagen and hyaluronic acid (Fig 1C and 1F). Scanning electron microscopy imaging: indicates that DWJM has interconnected open spaces, with sizes ranging from 20 to 100 μm (Fig 1G). Transmission electron microscopy: demon- strates an absence of intact cells the DWJM scaffold under examination (Fig 1H). Thus, the decellularization process resulted in a porous matrix, rich in collagen and hyaluronic acid and devoid of cells. 3.1.1 DNA quantification studies. DNA was isolated from the native WJ matrix and from DWJM and quantified as described above. Mean dsDNA content per DWJM wet weight sample was 1.7 x 10−3 μg/mg (range: 1.4 x 10–3–2 x 10−3 μg/mg), while the mean dsDNA per WJ matrix wet weight sample was 5.1 x 102 μg/mg (range: 3.17 x 10–2–7.33 x 10−2 μg/mg) (Fig 2A). Therefore, 96.6% ± 0.4% reduction in dsDNA was achieved for all the scaffolds analyzed, thus indicating that the majority of cells and nuclei of human umbilical cord were removed. 3.1.2. Protein content analysis. Mass spectrometry revealed that the DWJM matrix pieces were composed of several structural proteins, including collagen I, III, VI, and XII. Transform- ing growth factor beta (TGFB) was also observed in addition to matrix proteins such as fibro- nectin-I, which binds to extracellular matrix components for instance collagen, heparin sulfate, tenascin and lumican. A full list of the proteins identified on mass spectrometry evalua- tion of DWJM is as shown in Table 2. 3.1.3. Glycosaminoglycan content analysis. Glycoaminoglycans (GAGs) are glycopro- teins with a protein core and long unbranched polysaccharide with repeating disaccharide units. Among other functions, through its carboxylic and /or sulfate ester groups, GAGs can DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 9 / 23
  • 10. Fig 1. Characterization of Decellularized Wharton’s Jelly Matrix (DWJM). A) A fragment of the isolated DWJM. A skin punch biopsy kit, (right lower corner image) was used to obtain 5–7 mm DWJM scaffolds. B) hematoxylin and eosin (H&E) stained sections of the DWJM showing empty spaces. (Scale bar represents 0.1 mm.) C) Collagen I immunohistochemistry of the DWJM (scale bar is 50 μm), D) Trichrome staining images of human umbilical cord, and E) Decellularized Wharton’s jelly matrix. (Scale bar represents 50 μm.) Red color represents blood, light blue collagen, and cells/nuclei are in black/dark blue. F) Immunohistochemical staining of DWJM by anti- hyaluronic acid antibody. The matrix is rich in collagen and there is abundant hyaluronic acid expression at some parts compared to the others. (Scale bar represents 25μm.) G) Scanning electron microscopy images of DWJM. One surface appears flat with compact matrix (left lower image) while, less dense tissue with open spaces is identified in other areas (lower right and middle images). (Scale bar for the full picture is 600 μm.) H) Transmission electron microscopy images of DWJM. More electron-dense areas of DWJM (left upper image) and less electron dense areas (right upper image) are observed. No intact cells were observed in any of the panels. (Scale bar for left upper image is 2 μm, for right upper image 10 μm, and for the two lower images 500 nm.). doi:10.1371/journal.pone.0172098.g001 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 10 / 23
  • 11. form bridges and link collagens constructing an interconnected network of extracellular matrix to maintain and define shape of connective tissues and organs [17, 18]. Glycosamino- glycan analysis indicated that DWJM contained sulfated GAGs (mean = 0.661 ± 0.107 μg/mg), which was significantly less than that for native umbilical cord Wharton’s jelly tissue (3.0 ± 0.355 ug/mg, <p = 0.05) (Fig 2B). The loss of various cell types such as human umbilical vein cells (HUVECs), Wharton’s jelly mesenchymal stem cells (WJMSCs), and umbilical cord blood mesenchymal stem cells (UCBMSCs) during processing may account for the reduced content of GAGs (19), yet retaining some in the scaffold material. 3.2. DWJM scaffold seeding with WJ and BM MSCs 3.2.1. MSC characterization by flow cytometry. The isolated WJMSCs (Fig 3A) and BMMSCs (Fig 3B) were plastic- adherent and stained positive for MSC markers such as CD73, CD90, and CD105 by flow cytometry. WJMSCs and bone marrow mesenchymal stem cells (BMMSCs) were negative for hematopoietic cells markers CD45, CD34, CD14 or CD11b, CD79α or CD19. 3.2.2 Assessment of MSC interactions with DWJM. WJMSC interactions with DWJM were studied using several modalities. Cell The adherence to and penetration into the matrix were assessed as early as 24 hours. WJMSC were labeled with live cell calcein green stain (CGS), and their interactions post- seeding with the DWJM scaffolds were followed by confocal microscopy. DWJM devoid of live cells did not show any fluorescence although the media in the culture well was saturated with calcein green. On the other hand, clusters of round cells were seen on the surface of Fig 2. Quantification of DWJM. A) DNA quantification study performed on the matrix before decellularization and after decellularization. DWJM showed significantly less DNA compared to the native WJ matrix before decellularization. B) Glycosaminoglycan content assessment of the matrix before and after decellularization. (* Indicates statistical significance (p < .05)). doi:10.1371/journal.pone.0172098.g002 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 11 / 23
  • 12. Table 2. Proteins identified in Decellularized Wharton’s Jelly Matrix (DWJM) by mass Spectrometry. Protein name Accession number (1)* Sequence coverage MW [kDa] Theoretical. pI Peptides number Unique Peptides Collagen alpha-3(VI) 219521324 13.70 278.0 8.15 18 18 Collagen type I alpha-1 110349772 6.01 138.8 5.80 7 2 Collagen type I alpha 1 180392 9.13 98.5 6.83 7 2 Collagen, type VI, alpha 1 119629727 12.06 108.5 5.43 8 8 Human Serum Albumin 55669910 16.78 65.2 5.80 7 7 Collagen type I alpha 2 825646 6.49 72.2 7.96 4 4 Collagen type VI alpha-2 isoform 2C2 115527062 13.74 108.5 6.21 8 8 Fibronectin 1 219518912 5.38 239.5 5.88 5 5 G-gamma-hemoglobin 183851 31.68 11.0 6.68 2 2 Protein kinase, DNA-activated, catalytic polypeptide 119607089 0.47 458.5 7.08 1 1 Tenascin C 156229767 4.93 210.4 4.98 4 4 TGFBI, beta-induced transforming growth factor 221044656 19.25 55.7 6.84 4 4 Lumican 4505047 15.68 38.4 6.61 3 3 Collagen, type III, alpha 1 119631314 2.66 106.3 8.10 2 2 Osteoglycin 55957237 13.06 30.4 8.34 3 3 TGFBI beta-induced transforming growth factor 37589544 3.00 75.1 7.23 1 1 Actin, alpha 119612724 12.50 30.3 5.00 2 1 Beta actin, gamma 1 194375299 10.21 37.3 5.71 2 1 HCG2044004 Human chorionic growth hormone 119628289 46.88 3.6 9.32 1 1 Collagen, type XII, alpha 1, isoform CRA_c 119569135 2.22 333.0 5.53 3 3 Hemoglobin alpha 2 13958153 59.21 8.4 7.14 2 2 Immunoglobulin heavy chain variable region 145911949 33.33 9.6 6.52 1 1 Ig G1 H Nie 229601 3.57 49.2 8.54 1 1 Decorin 119617856 14.29 28.0 8.13 2 2 Unnamed protein product 40036688 17.72 17.8 8.38 1 1 N6AMT2 Lysine N-methyl transferase 119628685 29.07 9.8 4.36 1 1 Dynein, axonemal, heavy chain 14 220732359 5.31 40.7 5.21 1 1 Chain D, Crystal Structure Of A Sparc-Collagen Complex 215261061 36.36 3.0 11.00 1 1 Golgin subfamily A member 3 (GOLGA3) protein 38174254 4.63 93.0 5.05 1 1 Glyceraldehyde 3-phosphate dehydrogenase 134254708 14.46 17.3 8.60 1 1 Triacylglycerol lipase (EC 3.1.1.3), hormone- sensitive—human 1082874 3.18 85.4 7.77 1 1 PLEKHG3 protein Pleckstrin homology domain family G 120537866 3.32 80.8 5.40 1 1 OPK V Other protein kinase group, NimA family 38502049 4.01 67.9 8.98 1 1 Plexin D1, isoform CRA_c 119599646 1.09 193.4 6.96 1 1 CDH24 Cadherin 24 28375477 10.79 26.3 5.43 1 1 Beta IV spectrin isoform sigma3 11602888 1.76 148.5 6.37 1 1 FBLN1 Fibulin-1 22761800 3.61 70.5 5.91 1 1 Unnamed protein product 40035675 3.16 68.9 9.32 1 1 Immunoglobulin heavy chain variable region 13171510 52.73 6.2 8.76 1 1 Periostin isoform thy8 166343771 3.19 80.3 8.19 1 1 Transferrin receptor protein 2 33589848 3.37 88.7 6.11 1 1 H2AFJ histone 194382012 17.12 12.1 10.40 1 1 Large tumor suppressor, homolog 2 variant 62089380 1.95 101.4 9.22 1 1 (Continued) DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 12 / 23
  • 13. seeded DWJM scaffolds within 2 hours of seeding. (Fig 4A). Elongated spindle shaped cells were noted inside DWJM within 48 hours. (Fig 4A). Since, early interactions may not represent cell behavior at a later time point, we evaluated WJMSC interaction with DWJM at 1 week following their seeding using FEI Versa 3D dual beam imaging. DWJM fibers of varying diameters and pore sizes were stained purple (Fig 4B), while we observed spindle shaped WJMSCs arranged along the fibers of DWJM (Fig 4C). We performed live imaging after staining the matrix with cells to further evaluate WJMSC interaction with DWJM. WJMSCs were observed migrating continuously in and out of the matrix. Cell morphology changed with the cells in the matrix becoming spindle-shaped, and developing cellular extensions while moving in and out of the matrix. Some WJMSCs could be seen in stages of division and proliferation. As the cells migrated outside the matrix, it appeared as though they were pulling part of the matrix material along with them (S1 Video). Since DWJM is a three-dimensional structure, imaging DWJM at different z-planes demon- strated that the WJMSCs were penetrating the matrix at various depths (S2 Video). WJMSCs can be seen migrating on the surface of DWJM, within DWJM, and outside of DWJM. Thus, these studies demonstrated that WJMSCs did penetrate into DWJM, continuously migrating and proliferating throughout the spaces and dimensions DWJM scaffold. 3.3 Proliferation of WJMSCs seeded onto DWJM scaffolds Next, we examined DWJM effects on WJMSC proliferation using the Alamar Blue cell viability assay. WJMSCs cultured as a monolayer (2D) served as controls. After 1 week, WJMSCs cul- tured in 3D had significantly lower fluorescence compared to WJMSCs cultured in 2D, indi- cating that the cell-matrix interactions allowed 3D WJMSCs to proliferate, yet at a lower extent compared to WJMSCs cultured in 2D (Fig 5A). Table 2. (Continued) Protein name Accession number (1)* Sequence coverage MW [kDa] Theoretical. pI Peptides number Unique Peptides Truncated beta-globin 58201131 47.50 4.5 9.47 1 1 Dermatopontin 27151769 39.8 24 4.82 4 4 Serum albumin preproprotein [Homo sapiens] 4502027 36.29 69.3 6.28 17 17 Ig kappa chain C region 125145 32.08 11.6 5.87 2 2 Fibrinogen beta chain 399492 26.68 55.9 8.27 6 6 Fibrillin-1 311033452 17.69 312 4.93 25 25 Apolipoprotein A-I isoform X2 [Homo sapiens] 530398069 15.73 30.8 5.76 3 3 Ig gamma-1 chain C region 121039 15.5 36.1 8.19 3 3 Mimecan isoform X2 [Homo sapiens] 530391203 11.74 33.9 5.63 2 2 Fibrinogen gamma chain 20178280 9.05 51.5 5.6 2 2 Keratin, type I cytoskeletal 9 239938886 8.35 62 5.24 2 2 Fibronectin isoform 6 preproprotein [Homo sapiens] 47132549 6.8 239.5 5.88 9 9 Fibrinogen alpha chain isoform alpha pre-protein 11761629 6.52 69.7 8.06 3 3 Alpha-fetoprotein 120042 6.4 68.6 5.68 2 2 Keratin, type II cytoskeletal 1 238054406 5.59 66 8.12 3 3 Versican core protein 2506816 2.06 372.6 4.51 3 3 Fibrillin-2 238054385 1.03 314.6 4.86 2 2 * Accession number refers to the accession number in the National Center for Biotechnology Information (NCBI) protein database. doi:10.1371/journal.pone.0172098.t002 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 13 / 23
  • 14. 3.4 Cell migration assay To understand early adherence of WJMSCs to DWJM, we performed an in vitro trans-well migration assay using DWJM scaffolds as the cell attractant. Within 4 hours, a significantly higher number of WJMSCs migrated across the trans-well when DWJM was present (Fig 5B) thereby suggesting that DWJM acts as a cell attractant. This cell attractant quality of the matrix was further investigated in our animal model. 3.5 Gene expression studies A genetic approach was used to further explore the effects of DWJM on WJMSCs. Therefore; we evaluated genes responsible for cell adhesion, (to study the effects of WJMSC adhesion to DWJM), those for apoptosis, and those for proliferation (given the observed effects on WJMSC proliferation using alamar Blue). Through examination of genes associated with known types of MSC differentiation, we sought to determine the influence of DWJM on WJMSC differentiation. Similar gene expression studies were performed on BMMSCs, which served as controls. Fig 3. MSC characterization by flow cytometry. A) Wharton’s jelly mesenchymal stem cell (WJMSCs) and, B) bone marrow mesenchymal stem cell (BMMSCs). All MSCs stained positive for CD90 by fluoroscein isocyanate (FITC), CD105 by phycoerythrin (PE) and CD73 by allophycocyanin (APC); and they were negative for hematopoietic markers CD45, CD34, CD14 or CD11b, and CD20 as analyzed by Cell Profiler (CP) software (Broad Institute). doi:10.1371/journal.pone.0172098.g003 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 14 / 23
  • 15. A) Cell adhesion genes (Fig 6A and 6G). Expression levels of cell adhesion genes CD 44, integrin subunit beta 1 (ITGB1) (CD 29), cell surface antigen (Thy1) (CD 90), activated leuko- cyte adhesion molecule (ALCAM) (CD 166) and vascular cell adhesion molecule-1 (VCAM1)/ (CD106) were tested in WJMSCs and BMMSCs after culturing in DWJM for 7 days. There was no significant change in the expression of ITGB1, while endoglin membrane glycoprotein (ENG)/(CD105), THY1, ALCAM and VCAM1 remained below baseline levels in WJMSCS cultured in DWJM. On the other hand, after 4 days, BMMSCs cultured in DWJM showed 0.5 fold reduction in the expression of ENG, ITGB1, THY1, ALCAM and VCAM1 genes. Fig 4. Transplantation and culturing of WJMSCs on DWJM. A) Confocal microscopy images of DWJM and WJMSCs on DWJM after 2 hours (upper panel), 1 day (center panel), and 2 days (lower panel) post- cell seeding. The cells are labeled with calcein acetylmethyl (AM) that stains the live cells in green. Dual beam imaging of B) DWJM and C) DWJM seeded with WJMSCs for 1 week. The Everhart-Thornley detector (ETD) is a standard secondary electron detector used in scanning electron microscopy to study topography, while the circular backscatter (CBS) is a backscatter detector that reveals lipid content when samples are stained with osmium tetroxide (OT) (red/orange). Images have been pseudo-colored to enhance definition proportional to secondary electron signal for ETD. (Scale bar is 20 μm.) DWJM appears to be a fibrous interpenetrating network with varying pore sizes, while WJMSCs were arranged along the fibers of DWJM. doi:10.1371/journal.pone.0172098.g004 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 15 / 23
  • 16. However, by day 7 we observed an increase in expression of these genes, thus restoring their expression to baseline levels in the case of ENG, ITGB1, and ALCAM. B) Chondrogenic genes (Fig 6B and 6H). The expression of prechondrocyte and chon- drocyte marker SOX9, chondrocyte markers aggrecan (ACAN), and collagen Type II alpha-1 (COL2A1) were examined in WJMSCs and BMMSCs when cultured in DWJM. ACAN and COL2A1 were undetected in WJMSCs cultured in DWJM, while ACAN was down-regulated over time in BMMSCs. SOX9 expression was up regulated in WJMSCs and BMMSCs as com- pared to baseline value, with BMMSCs showing a 4-fold increase at day 4 and a 15-fold increase at day 7. Hyaluronan synthase gene (HAS2) expression increased 3-fold at day 4 and 1-fold at day 7 for WJMSCs cultured in DWJM, while BMMSCs showed a decrease in HAS2 expression. C) Adipogenic genes (Fig 6C and 6I). WJMSCs and BMMSCs demonstrated expression of the adipogenic differentiation genes—fatty acid binding protein (FABP4) and Peroxisome proliferator- activation receptor– γ (PPARγ). WJMSCs cultured in DWJM demonstrated a decrease in the expression of FABP4 and PPARγ, while BMMSCs demonstrated increased expression of both genes at one week as compared to baseline value. Though these differences were statistically significant, their biological importance is unclear since the magnitude of change is small in both cases. D) Myogenic genes (Fig 6D and 6J). The expression of vimentin (VIM), byglycan (BGN), desmin (DES), actin alpha 2 (ACTA 2) and collagenase 6 (COL6A1) were studied in WJMSCs and BMMSCs cultured DWJM. At day 7 of culture, DES was down- regulated in WJMSCs, while BMMSCs demonstrated no significant change from baseline. However, the decrease in ACTA2 expression in both the cell lines was noteworthy. E) Osteogenic genes (Fig 6E and 6K). The expression of runt-related transcription factor (RUNX2), key to osteoblastic differentiation, was evaluated in WJMSCs and BMMSCs cul- tured in DWJM. In WJMSCs, the expression of RUNX2 increased 4-fold above a normalized baseline value of 1.0 at day 4 followed by a significant decrease at day 7. However, in the case of BMMSCs, expression of RUNX2 increased by 0.5-fold and 1.5-fold over baseline values at day 4 and 7, respectively. The expression of other osteogenic lineage markers alkaline phos- phatases (ALPL) and COL1A1 were assessed over time, and it was observed that COL1A1 was down-regulated in both cell types, while there was no significant difference seen in ALPL levels Fig 5. Assessing WJMSC viability and proliferation when seeded on DWJM. A) Alamar blue assay to assess the viability of cells seeded on the matrix and B) Cell migration assay performed using trans-wells with cells alone (control) and cells migrating towards DWJM, (* Indicates statistical significance p < 0.05). doi:10.1371/journal.pone.0172098.g005 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 16 / 23
  • 17. in BMMSCs. WJMSCs exhibited a transient 8-fold increase in secreted phosphoprotein 1 (SPP1) expression at day 4, while WJMSCs and BMMSCs demonstrated no significant change in SPP1 expression at day 7 as compared to baseline value. F) Apoptosis, proliferation, and other differentiation genes (Fig 6F and 6L). WJMSCs and BMMSCs cultured in DWJM showed no significant change in the expression of apoptotic regulator bcl-2-like protein (BAX) at day 7, while proliferation marker MKI67 exhibited signif- icant decrease in gene expression when compared to the respective baseline values. WJMSCs demonstrated a significant, albeit small, decrease proliferating cell nuclear antigen (PCNA) expression at week 7. 3.6 Animal studies Since our in vitro studies revealed several qualities such as cell attraction and survival, although at a lower proliferation rate, we performed a set of experiments to demonstrate the ability of Fig 6. Relative fold change in the mRNA levels of the indicated genes. Panel A-F are WJMSCs on DWJM with A) Cell adhesion genes, B) Chondrogenic genes, C) Adipogenic genes, D) Myogenic genes E) Osteogenic genes, F) Apoptosis and proliferation genes. Panel G-L are BMMSCs cultured on DWJM with G) Cell adhesion genes, H) Chondrogenic genes, I) Adipogenic genes, J) Myogenic genes K) Osteogenic genes, L) Apoptosis and proliferation genes. Relative fold- change is represented on the y-axis and the genes were represented along the x-axis. The horizontal line represents the gene expression of cells before seeding at Day 0. (* Represents statistical significance p<0.05.) doi:10.1371/journal.pone.0172098.g006 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 17 / 23
  • 18. DWJM to attract cells in vivo using a murine model using GFP labeled osteocytes. Mice with defect alone (Fig 7A) were our control group, and mice with defect and DWJM served as the treatment group (Fig 7B). To study the early and late migration of GFP positive cells into DWJM, the mice were sacrificed at 24 hours and 14 days, respectively. Structural integrity of DWJM was evaluated by visual inspection after removing the skin and exposing the defect at the end of the experiment (Fig 7C). The matrix appeared intact 14 days after surgery (Fig 7C) and histological examination revealed the presence of cells (Fig 7E, 7H and 7I), some of which were also GFP positive (Fig 7F and 7J). GFP positive cells were observed in DWJM as early as 24 hours. Since these mice had GFP-labeled osteocytes, the presence of GFP positive cells by immunohistochemistry suggests that osteocytes from the neighboring bone migrated into the matrix in a diffuse pattern. Additionally, in vivo live animal imaging system (IVIS) was used to track GFP-labeled cells (Fig 7D) and it was observed that mice with defect alone exhibited a lack of GFP/green signal at the defect site. At 14 days, GFP signal was observed at the defect site in mice with DWJM, while there was no signal in mice with defect only. Thus, the presence of GFP signal in the area of cranial defect as evidenced by live imaging also shown by presence Fig 7. WJMSCs transplantation into an in vivo animal model. A) Mice with cranial defect, B) mice with cranial defect and DWJM, C) mice with cranial defect and DWJM 14 days post-surgery. Arrows in A represent the defect, B shows the DWJM and C is the defect and DWJM 14 days post-surgery. D) IVIS imaging of the mice post—surgery—1) Mice with DWJM 24 hours post- surgery; 2–6) designates mice 14 days after the surgeries. D2 is mice without any intervention, D3 and D4 are mice with the defect alone, and D5—D6 represent mice with defect and DWJM. The red circles indicate the defect sites and the inset images are a higher magnification of the defect site in mice. The green fluorescence signal at the defect site signifies the migration of the GFP positive cells into the defect. Images E-J represent the histology images of bone specimen with DWJM 14 days post-surgery, with image E) hematoxylin-eosin stained (H&E) section of DWJM tissue specimen 24 hours post-surgery, and image F depicts GFP immunohistochemistry staining of the same. Images G-J represent DWJM sample 14 days post-surgery with G, H and I being H&E stained sections of DWJM viewed at different magnifications as indicated in the figure. J represents the GFP immunohistochemistry of the section in image I. The arrows in image F, J represent GFP positive cells. doi:10.1371/journal.pone.0172098.g007 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 18 / 23
  • 19. of GFP labeled cells focally distributed on histological sections of DWJM demonstrate that DWJM acted as a chemo-attractive and biocompatible scaffold material. 4. Discussion Although a wide variety of synthetic and natural scaffolds are readily available for tissue engi- neering applications, natural polymers such as collagen, gelatin, silk, chitosan, and elastin pose some difficulties with processing, purity, and protein denaturation. As for synthetic materials, metal alloys are difficult to handle and are not biodegradable [2,3, 19]. Polymers such as poly lactic-acid (PLLA), polyglycolic acid (PGA), polycaprolactone (PCL), poly lactic acid-co-gly- colic acid (PLGA) fit the properties of an ideal scaffold, but they are synthetic in origin and lack biological properties. Therefore, increasing needs to develop an ideal natural scaffold material [2–7, 20]. In lieu of the advantages and disadvantages of all the natural and synthetic scaffolds, we believe that DWJM has desirable features since it is a natural scaffold material that is both biocompatible and biodegradable, while promoting cellular adherence and proliferation. Accordingly, we have demonstrated that DWJM is a biocompatible matrix that promotes WJMSC adhesion, penetration into the matrix in vitro while maintaining cell viability. The decellularization process adopted in our work resulted in a novel 3D matrix completely devoid of cells and dsDNA, consistent with current recommendations for tissue decellularization [21]. In our experiments, we specifically focused on the WJ matrix with total removal of vascu- lar tissues, allantoic duct, and amniotic epithelium, in contrast to other approaches such as that proposed by Chan et al. [22]. Mass spectrometry analysis showed a significant residual of important extracellular matrix proteins such as collagen, fibronectin, lumican, and tenascin. These proteins play an important role in developing a scaffolding material for bone and cartilage tissue engineering applications. For example, fibronectin has been shown to enhance the quality of scaffolding material used for osteogenic differentiation [23]. Also, lumican is a matrix protein that has been correlated with in vivo bone formation by transplantation of in vitro generated osteospheroids from human mesenchymal stem cells[24]. TGF-β, identified in DWJM, also plays an important role in regulating osteogenic differentiation [25] and chondrogenic differentiation of MSCs by enhancing COL2A1 expression [26]. DWJM also contains sulfated GAGs, which are reported to enhance chondrogenic [27] and osteogenic differentiation in addition to improving cell- matrix interactions [28]. GAGs like chondroitin sulfate were also found to enhance the biolog- ical activity of collagen I scaffolds in supporting chondrocytes [29]. When WJMSCs were uniformly seeded on DWJM, cellular condensations were observed in some areas of the scaffold. This phenomenon of mesenchymal cell condensation is very similar to the process observed in early chondrogenesis resulting from cell-cell and cell-matrix inter- actions[30]. TGF-βI also plays a role in inducing pre-cartilage condensation [31]. Since our mass spectroscopy identified that DWJM has retained TGF-β and other matrix proteins such as collagen I, fibronectin, and tenascin,, we postulate that these proteins may have provided critical cues resulting in the WJMSCs condensation in some areas of DWJM. The difference in timing of proliferation between WJMSCs/BMMSCs when cultured in 2D and on DWJM was consistent with an observed decrease in expression of proliferation marker Ki-67 gene, thereby indicating that MSC proliferation slows down as cells interact with DWJM scaffolds. Similar observations have been made by other researchers who also demonstrated that 3D culture conditions were found to slow down cell proliferation [32]. CD 44 is a cell adhesion receptor involved in interacting with multiple ligands such as hya- luronan, fibronectin and collagens [33]. Although BMMSCs physiologically do not express CD DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 19 / 23
  • 20. 44 in human or mice, Qian et al demonstrated that in vitro culture of these MSCs could result in CD 44 expression. [34–36]. In our study, we observed increased expression of CD 44 gene in WJMSCs and BMMSCs when cultured in DWJM for 7 days. Since the decellularization pro- cess adopted in this work abundantly retained hyaluronic acid in DWJM, the induction of CD 44 in both the MSCs cultured on DWJM could possibly be associated with anchoring of the cells to hyaluronic acid in the matrix. Cell surface markers such as Thy1, endoglin, ALCAM, CD 44 and VCAM have been used to isolate homogeneous MSC populations [34,37, 38]. When BMMSCs were cultured over DWJM, no significant changes in gene expression were noticed for cell adhesion molecules Thy 1 and ALCAM, while WJMSCs showed decreased expression of these genes. These subtle differences in the expression of the adhesion genes between WJMSCs and BMMSCs could be attributed to WJMSCs being native to the Whar- ton’s jelly matrix, while BMMSCs were introduced into a new environment. Our gene expression studies show no clear differentiation pattern for WJMSCs when cul- tured in DWJM. Though RUNX2 expression is increased in BMMSCs cultured in DWJM, which is a marker of in MSC commitment to osteogenic differentiation [39, 40], SOX9 expres- sion was also increased, which is an inhibitor of RUNX2, thus blocking osteoblastic matura- tion; which typically occurs during chondroprogenitor fate determination [41]. In an attempt to understand SOX9 and RUNX2 roles in osteogenesis in MSCs, Loebel et al. has shown that the RUNX2/SOX9 ratio can be used to screen for osteogenesis during in vitro osteogenic dif- ferentiation of MSCs [42]. In our experiments, the ratio of RUNX2/SOX9 showed the same decreasing trend for WJMSCs and BMMSCs cultured over DWJM (WJMSCs: 3.26 at day 4 to 0.62 at day 7; BMMSCs: 0.34 at day 4 to 0.16 at day 7) thereby indicating non-commitment to osteogenic lineage in either case. Several researchers have already demonstrated the potential of WJMSCs differentiation into myogenic lineage both in vitro and in vivo [43, 44]. Biglycan (BGN), a critical protein for collagen fibril assembly and muscle regeneration and alpha smooth muscle actin 2 (ACTA 2), a protein essential for maintaining cell motility, structure and integrity were significantly down-regulated in both types of MSCs. Accordingly, no line- age specific differentiation towards osteogenic, chondrogenic, myogenic or adipogenic genes was observed. Thus, we demonstrate that DWJM is a biocompatible matrix with cell attraction properties. This is further confirmed in our animal experiments, where we have demonstrated GFP labeled osteocytes migration into the matrix as early as 24 hours by immunohistochemistry, and at 2 weeks by in vivo live imaging. In addition to biocompatibility, DWJM has favorable surgical characteristics like porosity, elasticity, and compressibility, which make it easy to con- figure in irregular or curved shapes necessary for scaffold structure. Thus, based on all these characteristics, we envision that DWJM scaffolds will have several potential applications related to tissue engineering. 5. Conclusions In this manuscript we have successfully isolated, decellularized, and fully characterized the human WJ matrix. We have shown that this naturally obtained matrix can be made completely devoid of cells, yet still comprised of glycosaminoglycans especially rich in hyaluronic acid and several other key extracellular matrix proteins. We also have demonstrated that DWJM is a biocompatible matrix that allows for cellular adherence, penetration, growth and proliferation with suitable/acceptable mechanical properties in vitro and in vivo. In sum, this paper presents DWJM as a novel and natural 3D scaffold that can be used for tissue engineering and regenera- tive medicine applications. DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 20 / 23
  • 21. Supporting information S1 Video. Time-lapse imaging of WJMSCs seeded on DWJM. Time-lapse imaging of WJMSCs labeled in burgundy and DWJM labeled in green color (WJMSCs on DWJM are in yellow). Panel on the top left represents bright field image of WJMSCs on DWJM, top right represents labeled WJMSCs, bottom left are labeled DWJM, and bottom right shows labeled WJMSCs on DWJM. WJMSCs can be seen proliferating and migrating inside and outside the DWJM. Imaging was performed over 18 hours. (Scale bars represent 100 μm). (AVI) S2 Video. Time-lapse imaging of WJMSCs on DWJM in different Z planes. The three panels represent WJMSCs at three different depths in the matrix as Z − 1, Z 0 and Z + 1. Scale bar = 100 μm. The movies on the top panel are labeled WJMSCs on labeled DWJM, while the videos on the bottom panel are bright field images of WJMSC on DWJM. The full Z volume for the acquisitions was 225μ through 7 steps of 37.5μ per Z-step/plane. (AVI) Acknowledgments We thank Drs. CD Little and BJ Rongish, Department of Anatomy and Cell Biology, KUMC, for advice and use of their time-lapse instrumentation, supported by the The G. Harold and Leila Y. Mathers Foundation. We would also like to thank Dr. David W Rowe, University of Connecticut Health Center and Dr. Lynda Bonewald, University of Missouri Kansas City, for their generous gift of GFP mice. We also thank Dr. Sonia Rawal, Peggy Keefe, Yinghua Xiao, Barbara Fegley, Dr. Yi Feng, Mingcai Zhang, and Dr. Dandan Li for their help with some of the experiments and Da Zhang for his help with microscopy imaging. Author Contributions Conceptualization: OSA RAH MSD. Formal analysis: SJ CF MF. Funding acquisition: OSA. Investigation: SJ CF EB MF AA MTV AJM. Methodology: SJ AJM OSA RAH MSD. Project administration: SJ OSA. Resources: RAH JW MSD OSA. Supervision: OSA MSD RAH JW. Validation: SJ GC CF EB MF MTV AA AJM. Visualization: SJ AJM MF MTV AA. Writing – original draft: OSA. Writing – review & editing: SJ GC CF EB MF MTV AA AJM JW MSD RAH OSA. References 1. Bueno EM, Glowacki J. Cell-free and cell-based approaches for bone regeneration. Nature reviews Rheumatology. 2009; 5(12):685–97. doi: 10.1038/nrrheum.2009.228 PMID: 19901916 DWJM as a 3D biocompatible scaffold PLOS ONE | DOI:10.1371/journal.pone.0172098 February 21, 2017 21 / 23
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