Cell structure of bacteria and normal flora
Bacterial Cell Structure
A. L. Samer Faisal
3
Microbiology
• Agents of human infection:
– Bacteria Prokaryotes
– Helminthes Eukaryotes
– Protozoa Eukaryotes
– Fungi Eukaryotes
– Viruses Non-cellular
• Difference between Eukaryotes and
Prokaryotes
• Structure
• Replication
• Nucleic acid
5
Earliest
Prokaryotes
• Most numerous
organisms on Earth
• Include all bacteria
• Earliest fossils date 2.5
billion years old
BACTERIA
• Bacteria are large group of single celled
prokaryotic microorganisms
• 10 times as many bacteria cells in the human
flora as there are human cell in the body
Shape of Bacteria
Three basic shapes
• Cocci:streptococci, Staphylococci, Diplococci
• Bacilli: E.coli, Klebsiella, Bacillus.
• Spirochetes: Treponema, Borrelia
Cell structure of bacteria and normal flora
Bacterial Size
• Bacteria range in size from about 0.2 to 5 µm.
• The smallest bacteria (Mycoplasma) are about the
same size as the largest viruses (poxviruses) and are
the smallest organisms capable of existing outside
the host.
• The longest bacteria rods approach the size of some
yeasts and human R.B.Cs
10
According to staining
• Gram positive Thick peptidoglycan layer
and teichoic acid
• Gram negative Thin peptidoglycan layer and
lipopolysaccharide- endotoxin
• Acid fast bacilli Mycolic acid (lipids)
• Some bacteria are variable in shape
• PLEOMORPHIC----many shaped
• Shape of the bacteria is determined by its rigid
cell wall
• The microscopic appearance of bacterium is most
important criteria for its identification
13
pH requirements
• Most grow best at pH of 6.5 to 7.0
• Many act as decomposers
recycling nutrients
• Some cause disease (Pathogenic)
The Prokaryote
• Structural Components
MACROMOLECULE SUBUNIT POSITION IN CELL
PROTEIN Amino Acid Flagella, pili, cell wall,
cytoplasmic membrane,
ribosomes, cytoplasm
POLYSACCHARIDE Sugar/Carbohydrate Capsule, Inclusions, Cell wall
PHOPHOLIPID Fatty Acid Membranes
NUCLEIC ACID
(DNA/RNA)
Nucleotide DNA, Nucleoid, Plasmids,
Ribosomes,
Structural Components
Prokaryotes have 5 essential components
• Nucleoid (DNA)
• Ribosomes
• Cell membrane
• Cell wall
• Surface layer (Capsule)
• Appendages
Structural Components
BACTERIAL STRUCTURE
COVERING LAYERS
• Cell wall
• Peptidoglycan
Sugar back bone
with peptide side
chains,which are
cross linked
Rigidity osmotic
protection , site of
action of antibiotic,
lysozyme degrade.
Outer membrane
Gram Negative
bacteria
Lipid A
Polysaccharide
Toxic component
of endotoxin.
Surface antigen.
Surface fiber on
Gram Positive
bacteria
Teichoic acid Surface antigen
Cell structure of bacteria and normal flora
19
Protection
• Cell Wall made of Peptidoglycan
• May have a sticky coating called
the Capsule for attachment to
host or other bacteria
FUNCTION OF CELL WALL
• Maintaining the cell's characteristic shape
• Countering the effects of osmotic pressure
• Providing attachment sites for
bacteriophages-teichoic acids
• Providing a rigid platform for surface
appendages- flagella, fimbriae
Peptidoglycan
Cell structure of bacteria and normal flora
COMPARISON
Property Gram Positive Gram Negative
Thickness of wall 20-80 nm 10 nm
Number of layers in wall 1 2
Peptidoglycan content >50% 10-20%
Teichoic acid in wall + -
Lipid and lipoprotein content 0-3% 58%
Protein content 0% 9%
Lipopolysaccharide 0 13%
Sensitive to penicliiin + - (not as much)
Digested by lysozyme + - (not as much)
Properties of cell wall
• Gram negative bacteria contains endotoxin---
lipopolysaccharide
• Polysaccharides and proteins are antigens
• Porin proteins helps entry of hydrophilic
molecules
• Teichoic acid are fibers on outer surface of
gram positive ---ability to induces septic shock
Cell Membrane
• Composed of phospholipid bilayer
• FUNCTIONS
• Active transport
• Energy generation---oxidative phosphorylation
• Synthesis of precursors of cell wall
• Secretion of enzymes and toxins
26
• Infoldings of cell membrane carry
on photosynthesis & cellular
respiration
• Infoldings called Mesosomes
27
Mesosomes
MESOSOME
28
Sticky Bacterial Capsule
Plasmids
• Molecules of DNA that are found in bacteria
separate from the bacterial chromosome.
• A circular molecule only much SMALLER than the
genomic DNA
• REPLICATE AUTONOMOUSLY from the genomic
chromosome. Often there are MANY PLASMID
COPIES present in one cell. Further, a cell may
contain SEVERAL DIFFERENT PLASMIDS or it may
contain NO PLASMIDS at all. Plasmids generally carry
genes that are NOT ESSENTIAL for a cell's survival
• May carry genes for ANTIBIOTIC RESISTANCE
Transposons
• Transposons are pieces of DNA move from one
site to another ---- within or between the
DNAs of bacteria plasmid or bacteriophage.
• Nick name as Jumping genes
• Genes for one or more (usually more) proteins
imparting resistance to antibiotics. When such
a transposon is incorporated in plasmid, it can
leave the host cell and move to another. This
is the way that the alarming phenomenon of
multidrug antibiotic resistance spreads so
rapidly.
Appendages
Flagella: Flagellin
Function: Motility/chemotaxis
32
Flagella
• Bacteria that are
motile have
appendages called
flagella
• Attached by Basal
Body
• A bacteria can have
one or many
flagella
33
Flagella
• Made of Flagellin
• Used for Classification
• Monotrichous: 1
flagella
• Lophotrichous: tuft at
one end
• Amphitrichous: tuft at
both ends
• Peritrichous: all around
bacteria
34
Pili
• Short protein appendages PILIN
• Smaller than flagella
• Adhere bacteria to surfaces
• Used in conjugation for Exchange of
genetic information
• Aid Flotation by increasing buoyancy
35
Pili in Conjugation
36
Bacterial Shapes
37
Shapes Are Used to Classify
• Bacillus: Rod shaped
• Coccus: Spherical (round)
• Vibrio: Comma shaped with flagella
• Spirillum: Spiral shape
• Spirochete: wormlike spiral shape
38
Grouping of Bacteria
• Diplo- Groups of two
• Strepto- chains
• Staphylo- Grapelike clusters
Cell structure of bacteria and normal flora
40
41
Bacillus and E. coli
Spirochetes
ACCORDING TO STAINING
GRAM STAINING
Cell structure of bacteria and normal flora
Crystal
violet
Gram's
iodine
Decolorise with
acetone
Counterstain with
e.g. methyl red
Gram-positives
appear purple
Gram-negatives
appear pink
The Gram Stain
Gram-positive rods
Gram-negative rods
Gram-positive cocci
Gram-negative cocci
Cell structure of bacteria and normal flora
Cell structure of bacteria and normal flora
Cell structure of bacteria and normal flora
FORMATION OF BACTERIAL SPORE
Cell structure of bacteria and normal flora
• Found in Gram positive bacteria
• Tough, heat resistant
• Peptidoglycan > Picolinic acid
Cell structure of bacteria and normal flora
Normal Flora
• Definition
Normal flora is the
mixture of
microorganisms
(bacteria and fungi) that
are regularly found at
any anatomical site of
human body.
Cell structure of bacteria and normal flora
Symbiotic Relationship
• 1. Mutualistic
– Both organisms benefit – “mutually benefical”
• 2. Commensalistic
– One organism benefits, the other is neither helped
nor harmed
• 3. Opportunistic
– Under normal conditions, microbe does not cause
disease, but if conditions become conducive , it
can cause disease
Mutualistic
• Escherichia coli
– Synthesizes Vitamin K & B complex Vitamins
– In return, we provide a warm, moist nutrient rich
environment for E. coli
Commensalistic
• We have no Commensalistic relationships with
Bacteria
• If Bacteria are in or on our body, they are either
helping us (Microbial Antagonism) or harming
us.
Opportunistic
• Escherichia coli - normally in our digestive
tract where it causes no problems, but if it
gets into the urinary tract it can become
pathogenic.
• Staphylococcus aureus – commonly found in
the upper respiratory tract, but if it gets into a
wound or a burn it can become pathogenic
The Three Types of Symbiotic
Relationships
Table 14.1
Normal Microbial Flora
• 1. Resident Flora
– Microbes that are always present
• 2. Transient Flora
– Microbes that live in or on your body for a period
of time (hours, days, weeks, months) then move on
or die off
Transient Microbiota
• Remain in the body for only hours to
months before disappearing
• Found in the same regions as resident
microbiota
• Cannot persist in the body…because…
– Competition from other microorganisms
– Elimination by the body’s defenses cells
– Chemical or physical changes in the body
Sterile tissues
In a healthy human, the
internal tissues such as:
• blood
• brain
• muscle
• cerbrospinal fluid (csf.)
are normally free of
microorganisms.
Normal Flora
Normal Flora
• Skin
• Eyes (i.e.Cunjunctiva)
• Nose (i.e. Respiratory tract)
• Mouth (i.e Human Oral
Cavity)
• Ears
• Urogenetal tract
• Elementry tract
Normal Flora
• Resident flora
– Acquired rapidly during
& after birth
Normal Flora
• Resident flora
– Reflects age of person
– Changes continuously
through out life
– Reflects nutrition of
person
– Reflects genetics of
person
– Reflects environment of
person
– Reflects sex of person
1. They constitute a
protective host
defense mechanism
by occupying
ecological niches.
Importance of The Normal
Flora (Advantages)
Importance of The Normal Flora
(Advantages)
2. They produce vitamin B
and vitamin K in
intestine.
Importance of The Normal Flora
(Advantages)
3. The oral flora
contribute to
immunity by inducing
low levels of
circulating and
secretory antibodies
that may cross react
with pathogens.
Importance of The Normal Flora
(Advantages)
4. The oral bacteria flora
exert microbial
antagonism against
nonindigenous species by
production of inhibitory
fatty acids, peroxides,
bacteriocins, etc.
Importance of The Normal Flora
(Advantages)
5. The normal flora may
antagonize other bacteria
through the production
of substances which
inhibit or kill
nonindigenous species.
Importance of The Normal Flora
(Disadvantages)
1. They can cause disease in
the following:
a) When individuals become
immunocompromised.
b) When they change their
usual anatomic location.
Contamination vs. Infection
• Contamination – the mere presence of microbes in
or on the body
• Infection – results when the organism has evaded
the body’s external defenses, multiplied, and
become established in the body
Portals of Entry
• Sites through which pathogens enter the body
• Four major types
– Skin
– Mucous membranes
– Placenta
– Parenteral route
Skin
• Outer layer of packed, dead, skin cells
usually acts as a barrier to pathogens
• Some pathogens can enter through
openings or cuts
• Others enter by burrowing into or
digesting the outer layers of skin…flesh-
eating bacteria
Mucous Membranes
• Line the body cavities that are open to
the environment
• Provides a moist, warm environment that
is hospitable to pathogens
• Respiratory tract is the most commonly
used site of entry – entry is through the
nose, mouth or eyes
• Pathogens able to survive the acidic pH
of the stomach may use the
gastrointestinal tract as a route of entry
Some Pathogens that Cross the
Placenta
Table 14.3
Parenteral Route
• Pathogens deposited directly into tissues
beneath the skin or mucous membranes
Infection vs. Disease
• Infection is the invasion of the host by a pathogen
• Disease results only if the invading pathogen alters
the normal functions of the body
• Disease is also referred to as morbidity
Manifestations of Disease
• Symptoms – subjective characteristics of disease
felt only by the patient
• Signs – objective manifestations of disease that can
be observed or measured by others
• Syndrome – group of symptoms and signs that
characterize a disease or abnormal condition
• Asymptomatic, or subclinical, infections lack
symptoms but may still have signs of infection
Etiology
• Study of the cause of disease
• Germ theory of disease – disease caused by
infections of pathogenic microorganisms
• Robert Koch developed a set of postulates one
must satisfy to prove a particular pathogen causes
a particular disease
Cell structure of bacteria and normal flora

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Cell structure of bacteria and normal flora

  • 2. Bacterial Cell Structure A. L. Samer Faisal
  • 3. 3 Microbiology • Agents of human infection: – Bacteria Prokaryotes – Helminthes Eukaryotes – Protozoa Eukaryotes – Fungi Eukaryotes – Viruses Non-cellular
  • 4. • Difference between Eukaryotes and Prokaryotes • Structure • Replication • Nucleic acid
  • 5. 5 Earliest Prokaryotes • Most numerous organisms on Earth • Include all bacteria • Earliest fossils date 2.5 billion years old
  • 6. BACTERIA • Bacteria are large group of single celled prokaryotic microorganisms • 10 times as many bacteria cells in the human flora as there are human cell in the body
  • 7. Shape of Bacteria Three basic shapes • Cocci:streptococci, Staphylococci, Diplococci • Bacilli: E.coli, Klebsiella, Bacillus. • Spirochetes: Treponema, Borrelia
  • 9. Bacterial Size • Bacteria range in size from about 0.2 to 5 µm. • The smallest bacteria (Mycoplasma) are about the same size as the largest viruses (poxviruses) and are the smallest organisms capable of existing outside the host. • The longest bacteria rods approach the size of some yeasts and human R.B.Cs
  • 10. 10
  • 11. According to staining • Gram positive Thick peptidoglycan layer and teichoic acid • Gram negative Thin peptidoglycan layer and lipopolysaccharide- endotoxin • Acid fast bacilli Mycolic acid (lipids)
  • 12. • Some bacteria are variable in shape • PLEOMORPHIC----many shaped • Shape of the bacteria is determined by its rigid cell wall • The microscopic appearance of bacterium is most important criteria for its identification
  • 13. 13 pH requirements • Most grow best at pH of 6.5 to 7.0 • Many act as decomposers recycling nutrients • Some cause disease (Pathogenic)
  • 14. The Prokaryote • Structural Components MACROMOLECULE SUBUNIT POSITION IN CELL PROTEIN Amino Acid Flagella, pili, cell wall, cytoplasmic membrane, ribosomes, cytoplasm POLYSACCHARIDE Sugar/Carbohydrate Capsule, Inclusions, Cell wall PHOPHOLIPID Fatty Acid Membranes NUCLEIC ACID (DNA/RNA) Nucleotide DNA, Nucleoid, Plasmids, Ribosomes,
  • 15. Structural Components Prokaryotes have 5 essential components • Nucleoid (DNA) • Ribosomes • Cell membrane • Cell wall • Surface layer (Capsule) • Appendages
  • 17. BACTERIAL STRUCTURE COVERING LAYERS • Cell wall • Peptidoglycan Sugar back bone with peptide side chains,which are cross linked Rigidity osmotic protection , site of action of antibiotic, lysozyme degrade. Outer membrane Gram Negative bacteria Lipid A Polysaccharide Toxic component of endotoxin. Surface antigen. Surface fiber on Gram Positive bacteria Teichoic acid Surface antigen
  • 19. 19 Protection • Cell Wall made of Peptidoglycan • May have a sticky coating called the Capsule for attachment to host or other bacteria
  • 20. FUNCTION OF CELL WALL • Maintaining the cell's characteristic shape • Countering the effects of osmotic pressure • Providing attachment sites for bacteriophages-teichoic acids • Providing a rigid platform for surface appendages- flagella, fimbriae
  • 23. COMPARISON Property Gram Positive Gram Negative Thickness of wall 20-80 nm 10 nm Number of layers in wall 1 2 Peptidoglycan content >50% 10-20% Teichoic acid in wall + - Lipid and lipoprotein content 0-3% 58% Protein content 0% 9% Lipopolysaccharide 0 13% Sensitive to penicliiin + - (not as much) Digested by lysozyme + - (not as much)
  • 24. Properties of cell wall • Gram negative bacteria contains endotoxin--- lipopolysaccharide • Polysaccharides and proteins are antigens • Porin proteins helps entry of hydrophilic molecules • Teichoic acid are fibers on outer surface of gram positive ---ability to induces septic shock
  • 25. Cell Membrane • Composed of phospholipid bilayer • FUNCTIONS • Active transport • Energy generation---oxidative phosphorylation • Synthesis of precursors of cell wall • Secretion of enzymes and toxins
  • 26. 26 • Infoldings of cell membrane carry on photosynthesis & cellular respiration • Infoldings called Mesosomes
  • 29. Plasmids • Molecules of DNA that are found in bacteria separate from the bacterial chromosome. • A circular molecule only much SMALLER than the genomic DNA • REPLICATE AUTONOMOUSLY from the genomic chromosome. Often there are MANY PLASMID COPIES present in one cell. Further, a cell may contain SEVERAL DIFFERENT PLASMIDS or it may contain NO PLASMIDS at all. Plasmids generally carry genes that are NOT ESSENTIAL for a cell's survival • May carry genes for ANTIBIOTIC RESISTANCE
  • 30. Transposons • Transposons are pieces of DNA move from one site to another ---- within or between the DNAs of bacteria plasmid or bacteriophage. • Nick name as Jumping genes • Genes for one or more (usually more) proteins imparting resistance to antibiotics. When such a transposon is incorporated in plasmid, it can leave the host cell and move to another. This is the way that the alarming phenomenon of multidrug antibiotic resistance spreads so rapidly.
  • 32. 32 Flagella • Bacteria that are motile have appendages called flagella • Attached by Basal Body • A bacteria can have one or many flagella
  • 33. 33 Flagella • Made of Flagellin • Used for Classification • Monotrichous: 1 flagella • Lophotrichous: tuft at one end • Amphitrichous: tuft at both ends • Peritrichous: all around bacteria
  • 34. 34 Pili • Short protein appendages PILIN • Smaller than flagella • Adhere bacteria to surfaces • Used in conjugation for Exchange of genetic information • Aid Flotation by increasing buoyancy
  • 37. 37 Shapes Are Used to Classify • Bacillus: Rod shaped • Coccus: Spherical (round) • Vibrio: Comma shaped with flagella • Spirillum: Spiral shape • Spirochete: wormlike spiral shape
  • 38. 38 Grouping of Bacteria • Diplo- Groups of two • Strepto- chains • Staphylo- Grapelike clusters
  • 40. 40
  • 45. Crystal violet Gram's iodine Decolorise with acetone Counterstain with e.g. methyl red Gram-positives appear purple Gram-negatives appear pink The Gram Stain
  • 52. • Found in Gram positive bacteria • Tough, heat resistant • Peptidoglycan > Picolinic acid
  • 54. Normal Flora • Definition Normal flora is the mixture of microorganisms (bacteria and fungi) that are regularly found at any anatomical site of human body.
  • 56. Symbiotic Relationship • 1. Mutualistic – Both organisms benefit – “mutually benefical” • 2. Commensalistic – One organism benefits, the other is neither helped nor harmed • 3. Opportunistic – Under normal conditions, microbe does not cause disease, but if conditions become conducive , it can cause disease
  • 57. Mutualistic • Escherichia coli – Synthesizes Vitamin K & B complex Vitamins – In return, we provide a warm, moist nutrient rich environment for E. coli
  • 58. Commensalistic • We have no Commensalistic relationships with Bacteria • If Bacteria are in or on our body, they are either helping us (Microbial Antagonism) or harming us.
  • 59. Opportunistic • Escherichia coli - normally in our digestive tract where it causes no problems, but if it gets into the urinary tract it can become pathogenic. • Staphylococcus aureus – commonly found in the upper respiratory tract, but if it gets into a wound or a burn it can become pathogenic
  • 60. The Three Types of Symbiotic Relationships Table 14.1
  • 61. Normal Microbial Flora • 1. Resident Flora – Microbes that are always present • 2. Transient Flora – Microbes that live in or on your body for a period of time (hours, days, weeks, months) then move on or die off
  • 62. Transient Microbiota • Remain in the body for only hours to months before disappearing • Found in the same regions as resident microbiota • Cannot persist in the body…because… – Competition from other microorganisms – Elimination by the body’s defenses cells – Chemical or physical changes in the body
  • 63. Sterile tissues In a healthy human, the internal tissues such as: • blood • brain • muscle • cerbrospinal fluid (csf.) are normally free of microorganisms. Normal Flora
  • 64. Normal Flora • Skin • Eyes (i.e.Cunjunctiva) • Nose (i.e. Respiratory tract) • Mouth (i.e Human Oral Cavity) • Ears • Urogenetal tract • Elementry tract
  • 65. Normal Flora • Resident flora – Acquired rapidly during & after birth
  • 66. Normal Flora • Resident flora – Reflects age of person – Changes continuously through out life – Reflects nutrition of person – Reflects genetics of person – Reflects environment of person – Reflects sex of person
  • 67. 1. They constitute a protective host defense mechanism by occupying ecological niches. Importance of The Normal Flora (Advantages)
  • 68. Importance of The Normal Flora (Advantages) 2. They produce vitamin B and vitamin K in intestine.
  • 69. Importance of The Normal Flora (Advantages) 3. The oral flora contribute to immunity by inducing low levels of circulating and secretory antibodies that may cross react with pathogens.
  • 70. Importance of The Normal Flora (Advantages) 4. The oral bacteria flora exert microbial antagonism against nonindigenous species by production of inhibitory fatty acids, peroxides, bacteriocins, etc.
  • 71. Importance of The Normal Flora (Advantages) 5. The normal flora may antagonize other bacteria through the production of substances which inhibit or kill nonindigenous species.
  • 72. Importance of The Normal Flora (Disadvantages) 1. They can cause disease in the following: a) When individuals become immunocompromised. b) When they change their usual anatomic location.
  • 73. Contamination vs. Infection • Contamination – the mere presence of microbes in or on the body • Infection – results when the organism has evaded the body’s external defenses, multiplied, and become established in the body
  • 74. Portals of Entry • Sites through which pathogens enter the body • Four major types – Skin – Mucous membranes – Placenta – Parenteral route
  • 75. Skin • Outer layer of packed, dead, skin cells usually acts as a barrier to pathogens • Some pathogens can enter through openings or cuts • Others enter by burrowing into or digesting the outer layers of skin…flesh- eating bacteria
  • 76. Mucous Membranes • Line the body cavities that are open to the environment • Provides a moist, warm environment that is hospitable to pathogens • Respiratory tract is the most commonly used site of entry – entry is through the nose, mouth or eyes • Pathogens able to survive the acidic pH of the stomach may use the gastrointestinal tract as a route of entry
  • 77. Some Pathogens that Cross the Placenta Table 14.3
  • 78. Parenteral Route • Pathogens deposited directly into tissues beneath the skin or mucous membranes
  • 79. Infection vs. Disease • Infection is the invasion of the host by a pathogen • Disease results only if the invading pathogen alters the normal functions of the body • Disease is also referred to as morbidity
  • 80. Manifestations of Disease • Symptoms – subjective characteristics of disease felt only by the patient • Signs – objective manifestations of disease that can be observed or measured by others • Syndrome – group of symptoms and signs that characterize a disease or abnormal condition • Asymptomatic, or subclinical, infections lack symptoms but may still have signs of infection
  • 81. Etiology • Study of the cause of disease • Germ theory of disease – disease caused by infections of pathogenic microorganisms • Robert Koch developed a set of postulates one must satisfy to prove a particular pathogen causes a particular disease