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Open Research Gateway for the ELIXIR-GR Infrastructure (Part 3)
This document provides an overview of the Open Research Gateway for the ELIXIR-GR infrastructure. It discusses how the gateway acts as a single entry point to all research products from ELIXIR-GR, including publications, datasets, software, and more. Researchers can deposit and link their work through the gateway to practice open science. Statistics, reporting, and APIs are also available to monitor impact and advance open research. The team behind the gateway is working to improve customization and user guidance to better support the ELIXIR-GR community.
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Open Research Gateway for the ELIXIR-GR Infrastructure (Part 3)
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- 2. OpenAIRE ELIXIR-GR Webinar- 6 May 2020 … practice science in such a way that others can collaborate and contribute, where research data, lab notes and other research processes are freely available, under terms that enable reuse, redistribution and reproduction of the research and its underlying data and methods. Open Science – Open Research Open research beyond academia Innovation + Citizen science
- 3. Open Access Publications Open Access Data Open Software Open Metodologies Open Workflows/ProtocolsOpenEducation Open Peer-ReviewCitizen Science Open Science
- 4. Research data Research Software e-infra Tools & Services Research data Researchliterature Articles, docs, white papers 01101010 01100001 11010010 01101010 01100001 11010010 Publishing all kinds of products Enabling Reproducibility (R*) Fully-fledged assessment of science Fully-fledged scientific reward Enabling Monitoring Bridging RIs and OS publishing practices Research Infrastructures Scholarly Communication Infrastructure Research process How - Scholarly Communication transition to Open Science OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 5. Bridging the worlds wherescience is performed and science is published OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 6. Services for allstakeholders OpenAIRE ELIXIR-GR Webinar - 6 May 2020 Funders, institutions, RIs, initiatives, 3rd parties Content providers, Research Infras Researchers, scientists Support Accelerate Monitor
- 7. An open metadataresearch graph of interlinked scientific products, with access rights information, linked to funding information and research communities Open Complete De-duplicated Transparent Participatory Decentralized Trusted OpenAIRE ELIXIR-GR Webinar - 6 May 2020 Project Community FunderFunding Product Publication Research Data Software Organization Source Other res. products
- 8. … and more AcademicGraph … and more … and more … and more European and international funders … and more … and more … and more OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 9. Services for allstakeholders Funders, institutions, RIs, initiatives, 3rd parties Content providers, Research Infras Researchers, scientists Support Accelerate Monitor OpenAIRE ELIXIR-GR Webinar - 6 May 2020 ContentProviders17.000 Publications110.000.000 (de-duplicated, 10M con full-text) Projects3.000.000 Datasets10.000.000 Software230.000 Funders29
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- 11. Motivations Asauserofaresearch infrastructure,wherecanIfind theresultsoftheresearch activitiesofmypeers?Wherecan Itellthatmyresearchresults wereobtainedthankstothe servicesofmyresearch infrastructure? Literature & Data Deluge Asaresearcher,howcanIpublish myresearchproductsaccording toOpenScienceprinciples? OpenScience publishing tools Asamanagerofaresearch initiative/infrastructure,howcanI monitortheimpactofmyRIand providenumbersandproofsto mycurrentandfuturefunders? Research impact OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 12. Open Research Gateway OpenAIREELIXIR-GR Webinar - 6 May 2020
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- 14. The Open Research Gatewayfor ELIXIR-GR OpenAIRE ELIXIR-GR Webinar - 6 May 2020 https://beta.elixir-gr.openaire.eu/
- 15. A gateway toOpen Science AvirtualenvironmenttoimplementOpenSciencepublishingpractices Report to funders Uptake of Open Science publishing practices Research Impact All the research outcome of ELIXIR-GR DEPOSIT ANYTHING … and link them On demand publishing on services of Research Infrastructures Open Research Gateway A single entry point to ELIXIR-GR research products
- 16. • Gateway curatorsprovide lists of: Projects funding ELIXIR-GR Thematic/Infrastructural data sources (e.g. thematic repositories, journals) Bio.tools (criteria on authors and other metadata fields are applied) Zenodo communities Instructions for the OpenAIRE mining team to implement a full-text mining algorithm The full-text of Open Access publications is analysed and references to URLs of ELIXIR-GR services and software tools (e.g. Github links) are mined from the whole full-text, including References sections and footnotes • Researchers can manually add missing research products via the Link functionality Also in bulk with a list of DOIs or with an ORCID id • Another OpenAIRE process includes additional research products by propagation If an ELIXIR-GR result is supplemented by another research product, then the latter is also added among the ELIXIR-GR products (e.g. an ELIXIR-GR publication is supplemented by a dataset, then the dataset is an ELIXIR- GR dataset) How to identify the subset of products among those in the OpenAIRE Research Graph OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 17. What can youdo with the ELIXIR-GR Open Research Gateway? OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- 18. OpenAIRE ELIXIR-GR Webinar- 6 May 2020 - Uptake of Open Science publishing practices - Research impact - Report to funders - Impact of publications Search for all the research products of your RI Link related research products and contribute for a complete record of research of your RI - On demand publishing workflows via services of research infrastructures - Use OpenAIRE API and build other domain- specific services DEPOSIT ANYTHING
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- 21. OpenAIRE’s ”catch-all” repository A saferepository hosted by CERN where you can deposit any types of research products, link them to funding information and make them citeable. With a DOI. DEPOSIT ANYTHING but you can also search for journals and repositories in the OpenAIRE network
- 24. OpenAIRE APIs tobuild on top of the Research Graph Zenodo REST API to enhance RI services for semi-automatic deposition and automatically add research results to the gateway https://developers.zenodo.org/ http://develop.openaire.eu/ RI sources can contribute to the OpenAIRE Research Graph using the OpenAIRE Content Provider Dashboard and embracing the interoperability guidelines http://provide.openaire.eu/
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- 27. The EG-CI Cloudinfrastructure A Cloud Infrastructure (beta version) to support the on-demand execution of bioinformatic, container-based workflows produced by the ELIXIR-GR community How to bridge to the scholarly communication infrastructure? • Publication on Zenodo upon user’s request, with automatic generation of metadata and provenance of results
- 28. • Customization oflayout and colors • Re-design of the “Deposit” page • More content customizable by gateway curators To better guide ELIXIR-GR researchers towards Open Science best practices
- 29. Questions? OpenAIRE ELIXIR-GR Webinar- 6 May 2020 The team behind the ELIXIR-GR gateway: • Thanasis Vergoulis & Serafeim Chatzopoulos (ARC) – curators • Alessia Bardi (CNR-ISTI) – Product manager • Argiro Kokogiannaki (ARC) – GUI developer • Miriam Baglioni (CNR-ISTI) – Back-end developer • Pedro Principe & André Vieira (UMinho) – Support and training • Harry Dimitropoulos (ARC) – Full-text mining
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