ORTHOMYXOVIRUS
INTRODUCTION
• Spherical/ filamentous
• Enveloped
• Single, segmented RNA
• Hemagglutination, Myxovirus – Affinity for mucin
• Influenza
INFLUENZA VIRUSES
• 3 serotypes
• Type A,B,C
• MORPHOLOGY
Spherical – 80-120nm, Pleiomorphic +
Helical Symmetry – Nucleocapsid
RNA genome – Negative sense
SS, Segmented – 8 pieces
RNA dependent RNA Polymerase
Envelope – Inner M protein layer
Outer Lipid Layer
Peplomers – Trans lipid glycoprotein
2 types
Haemagglutinin –
Neuraminidase –
N spike
H spike
SS RNA
ANTIGENIC CLASSIFICATION
• Antigenic Nature of Ribonucleoprotein
• M protein
• 3 types – A,B,C
• Antigenic variation of HA & NAAg – Subtypes
• HA – 15 (H1-H15), NA – 9 ( N1-N9)
• Human – H1-H3, N1-N2
• Non human virus – Pandemic by assortment
ANTIGENIC STRUCTURE
• Ribonucleoprotein – RNP – Specific for A,B,C
• Matrix (M) Protein – Type specific
M1, M2
• Haemagglutinin (HA) – Strain specific
Antigenic variation
HA 1, HA 2
Triangular spike
Aggregation of RBC
• Neuraminidase (NA) – Strain specific
Surface
Mushroom spike
Destroys RBC Rs –
Release virion from
infected cell
LIFE CYCLE
ANTIGENIC DRIFT
• Minor Ag changes in HA/NA/ both
• Gradual
• Regular Intervals
• Mutation in HA/NA genes
• New Ag – related to old
• Epidemics
ANTIGENIC SHIFT
• Major changes in HA (2-3), NA (1-3)
• New subtype ( Unrelated to old virus )
• Unlikely due to Mutation
• Gene assortment (Recombination )
• Previous Virus Ab cant neutralise new Virus
• Major epidemics , Pandemics
ANTIGENIC SHIFT
CULTIVATION
EGG INOCULATION
• Amniotic cavity
• 11 – 13 day old chick
• After few passages – Allantoic cavity
• Detected – Hemagglutination
TISSUE CULTURE
• Primary monkey kidney , human embryo kidney
ANIMAL INOCULATION
• Intranasal
• Ferrets , Mice
DISEASE
• Influenza
• Acute Respiratory Distress Syndrome
• Mild coryza to Pneumonia
• IP – 4 days
• Self limiting in 7 days
LABORATORY DIAGNOSIS
• DEMONTRATION OF VIRUS ANTIGEN
Immunofluroscence
Rapid
Viral RNA – RT PCR
ISOLATION OF VIRUS
• Initial 2-3 days
• Throat garglings
• Amniotic cavity / human embryo kidney / Monkey
kidney
• Incubate in eggs for 3 days – Amniotic to Allantoic
• Hemagglutination
• Strains types Identified by antisera
• Subtypes - HAI
Haemagglutination test and haemagglutination inhibition test.
The serum from pig "A" contains no antibodies to influenza, which is
why haemagglutination occurs. The serum from pig "B" contains
influenza antibodies, so agglutination is inhibited.
The basis of HI assay - antibodies to influenza virus will prevent
attachment of the virus to red blood cells.
Therefore hemagglutination is inhibited when antibodies are present.
The highest dilution of serum that prevents hemagglutination is called
the HI titre
SEROLOGY
• CFT
• HAI
• 4 fold rise in titre of Ab between convalascnt
and Acute phase
Results of a haemagglutination inhibition test. The antibody titer is 1:80.
IMMUNITY
• 1 strain attack – 1- 2 years protection
• Doctrine of Original Antigenic Sin
When the body first
encounters an infection it
produces effective
antibodies against its
dominant antigens and
thus eliminates the
infection. But when it
encounters the same
infection, at a later
evolved stage, with a
new dominant antigen,
with the original antigen
now being recessive, the
immune system will still
produce the former
antibodies against this
old "now recessive
antigen" and not develop
new antibodies against
the new dominant one,
this results in the
production of ineffective
antibodies and thus a
weak immunity.
EPIDEMIOLOGY
• Airborne
• Type C – Endemic
• Type B – Sporadic , Epidemic
• Type A – Pandemics
• Winter/ Monsoon
• WHO – surveillance - ? – Pandemics
• Spanish Flu – 20 million deaths 1918
PROPHYLAXIS
UNIVERSAL FLU SHOT
THANK UUUUUUU

Orthomyxovirus - Morphology and laboratory diagnosis

  • 1.
  • 2.
    INTRODUCTION • Spherical/ filamentous •Enveloped • Single, segmented RNA • Hemagglutination, Myxovirus – Affinity for mucin • Influenza
  • 3.
    INFLUENZA VIRUSES • 3serotypes • Type A,B,C • MORPHOLOGY Spherical – 80-120nm, Pleiomorphic + Helical Symmetry – Nucleocapsid RNA genome – Negative sense SS, Segmented – 8 pieces RNA dependent RNA Polymerase
  • 4.
    Envelope – InnerM protein layer Outer Lipid Layer Peplomers – Trans lipid glycoprotein 2 types Haemagglutinin – Neuraminidase –
  • 7.
  • 9.
    ANTIGENIC CLASSIFICATION • AntigenicNature of Ribonucleoprotein • M protein • 3 types – A,B,C • Antigenic variation of HA & NAAg – Subtypes • HA – 15 (H1-H15), NA – 9 ( N1-N9) • Human – H1-H3, N1-N2 • Non human virus – Pandemic by assortment
  • 10.
    ANTIGENIC STRUCTURE • Ribonucleoprotein– RNP – Specific for A,B,C • Matrix (M) Protein – Type specific M1, M2 • Haemagglutinin (HA) – Strain specific Antigenic variation HA 1, HA 2 Triangular spike Aggregation of RBC
  • 11.
    • Neuraminidase (NA)– Strain specific Surface Mushroom spike Destroys RBC Rs – Release virion from infected cell
  • 13.
  • 15.
    ANTIGENIC DRIFT • MinorAg changes in HA/NA/ both • Gradual • Regular Intervals • Mutation in HA/NA genes • New Ag – related to old • Epidemics
  • 17.
    ANTIGENIC SHIFT • Majorchanges in HA (2-3), NA (1-3) • New subtype ( Unrelated to old virus ) • Unlikely due to Mutation • Gene assortment (Recombination ) • Previous Virus Ab cant neutralise new Virus • Major epidemics , Pandemics
  • 18.
  • 21.
    CULTIVATION EGG INOCULATION • Amnioticcavity • 11 – 13 day old chick • After few passages – Allantoic cavity • Detected – Hemagglutination TISSUE CULTURE • Primary monkey kidney , human embryo kidney
  • 22.
  • 23.
    DISEASE • Influenza • AcuteRespiratory Distress Syndrome • Mild coryza to Pneumonia • IP – 4 days • Self limiting in 7 days
  • 25.
    LABORATORY DIAGNOSIS • DEMONTRATIONOF VIRUS ANTIGEN Immunofluroscence Rapid Viral RNA – RT PCR
  • 26.
    ISOLATION OF VIRUS •Initial 2-3 days • Throat garglings • Amniotic cavity / human embryo kidney / Monkey kidney • Incubate in eggs for 3 days – Amniotic to Allantoic • Hemagglutination • Strains types Identified by antisera • Subtypes - HAI
  • 27.
    Haemagglutination test andhaemagglutination inhibition test. The serum from pig "A" contains no antibodies to influenza, which is why haemagglutination occurs. The serum from pig "B" contains influenza antibodies, so agglutination is inhibited.
  • 28.
    The basis ofHI assay - antibodies to influenza virus will prevent attachment of the virus to red blood cells. Therefore hemagglutination is inhibited when antibodies are present. The highest dilution of serum that prevents hemagglutination is called the HI titre
  • 29.
    SEROLOGY • CFT • HAI •4 fold rise in titre of Ab between convalascnt and Acute phase Results of a haemagglutination inhibition test. The antibody titer is 1:80.
  • 30.
    IMMUNITY • 1 strainattack – 1- 2 years protection • Doctrine of Original Antigenic Sin When the body first encounters an infection it produces effective antibodies against its dominant antigens and thus eliminates the infection. But when it encounters the same infection, at a later evolved stage, with a new dominant antigen, with the original antigen now being recessive, the immune system will still produce the former antibodies against this old "now recessive antigen" and not develop new antibodies against the new dominant one, this results in the production of ineffective antibodies and thus a weak immunity.
  • 31.
    EPIDEMIOLOGY • Airborne • TypeC – Endemic • Type B – Sporadic , Epidemic • Type A – Pandemics • Winter/ Monsoon • WHO – surveillance - ? – Pandemics • Spanish Flu – 20 million deaths 1918
  • 36.
  • 41.
  • 43.