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Pandora FMS
Administrator Manual
MySQL Server Monitoring in Unix
Administrator Manual Monitorización SQL Server  
© Artica Soluciones Tecnológicas 2005­2012
Indice
1Changelog...........................................................................................................................................3
2Introduction........................................................................................................................................4
3Requirements......................................................................................................................................5
3.1.Documentation the Area that requires the monitoring should report........................................5
4Compatibility Matrix .........................................................................................................................6
5Agent modules clasification...............................................................................................................7
6Instalation.........................................................................................................................................13
7Monitoring........................................................................................................................................14
8Plugin parametrization......................................................................................................................15
8.1. MySQL Access Configuration and General data...................................................................15
8.1.1. MySQL user, password and host....................................................................................15
8.1.2. General Data...................................................................................................................15
8.2.System Parameters...................................................................................................................16
8.2.1.System Checking Block...................................................................................................16
8.2.2.Checking the connectivity with the database ..................................................................16
8.2.3.Check if the MySQL process is active ............................................................................16
8.2.4.Server memory Check (process)......................................................................................16
8.2.5. Number of TIME_WAIT connections in the system......................................................17
8.2.6.Server disk space check ..................................................................................................17
8.2.7.Size of the ibdata1 File.....................................................................................................17
8.2.8.Searching errors in the error logs of the database ...........................................................17
8.3.Performance parameters..........................................................................................................18
8.3.1. Block of performance check ..........................................................................................18
8.3.2. Number of MySQL active connections .........................................................................18
8.3.3. Number of aborted connections due to the client did not close correctly the connection.
...................................................................................................................................................18
8.3.4. Number of bytes get by the clients.................................................................................18
8.3.5. Number of bytes sent by the clients................................................................................19
8.3.6. Information of the server status (SHOW GLOBAL STATUS ó SHOW STATUS).....19
8.3.7. Information of the InnoDB status (SHOW INNODB STATUS)...................................19
8.3.8. Number of insertions in the data base.............................................................................19
8.3.9.Number of locks on tables in the database when doing a transaction .............................20
8.3.10.Active locks on tables and registers for each active sesion ..........................................20
8.3.11.I/0 Requests pending.....................................................................................................20
8.3.12. Total size of data in GB................................................................................................20
8.4.Monitoring via SQL.................................................................................................................21
8.5.Execution of commands depending on conditions..................................................................21
8.6.Parameterization of the command associated to a check.........................................................22
8.7.Module status ..........................................................................................................................22
8.8.Kind of data ............................................................................................................................22
8.9.Data management in checks of kind of performance..............................................................23
1 CHANGELOG
Date Author Change Version
12/03/12 Tomas First Version v1r1
01/07/13 Mario P. Changes in code V1r2
Page 3
2 INTRODUCTION
This document has as main aim the description of the MySQL database monitoring on Unix. A series 
of “ base” modules has been chosen on the basis of our experience in the system monitoring and on 
the requirements of some of our clients. Besides, all the specifications collected in different real 
production environments have been added, taking  real specifications of database  administrators.
For the information extraction we use:
• An external configuration file  where all the plugin parameterization is defined. This 
configuration file could do calls (includes) to other files.
• The software already installed in the system is used (MySQL, system commands, MySQL 
alerts files, ect) for the monitoring done by the plugin without having to install libraries or 
third party utilities.
• An existing log parser is used (the one from Pandora) to process the MySQL alert logs.This 
parser should be “automatic” and should be based in the report of all the critical error 
messages with the “ERROR”* form.
• A serie of basic checks “by default” are done, but they could be deleted or customized.
• An “open” interface is available to specify SQL free queries, allowing to do all kind of 
SQL queries that are done with other tools or in a manual way by the administrators.
• The system is integrated with the Unix agent and with the capacity of distributing file 
collections, so the plugin could  be distributed by one  side, and the file colections by 
individual way­by agent­and/or by policy.
It is important to mention, that same as with the rest of the montoring with PandoraFMS, the 
MySQL monitoring plugin could be used to collect information kind “text string” (to manage it as 
events) or kind numeric  (to do performance management).
Page 4
3 REQUIREMENTS
The requirements for doing that this monitoring works properly are the following:
• To install the Pandora FMS agent.
• To install Perl
• To have one MySQL database installed in the machine where it is going to monitor, with 
connection to this database.
• To  specify the name, user, password and host of the MySQL database.
• It is necessary that the user whith which the Pandora FMS agent is executed, that is, the user 
that will execute the plugin, will have access to the following MySQL resources:
◦ MySQL homedir Directory( directory with the MySQL , usually  /var/lib/mysql).
◦  MySQL log file (usually /var/lib/mysql/mysql.log).
◦  Access and writting permissions to a directory for temporary files. 
3.1. Documentation the Area that requires the monitoring should report.
For the right MySQL monitoring, it should be necessary that the Technical Area sends some specific 
information that will be included in the configuration files. These information is the following:
• User, password, host with access to the MySQL database. This user should have permission 
to read all the tables from which he want to extract information. This user should have 
pemissions to read all the tables from which he want to extract information.
• Log files and MySQL base directory.
• If you want to monitor some item that does not come defined “by default”, then it will be 
necessary that you provide that SQL code to do this monitoring, and also an exit data 
example, specifying if it is numeric, kind string, etc).
Page 5
4 COMPATIBILITY MATRIX 
The agent compatibility matrix is the following:
Systems where it has been tested
• Ubuntu 10.04 with MySQL 5.0
• OpenSuse 11.2 with MySQL 5.5
Systems where it should work • Systems “Unix like” with MySQL 5.0 or 
newer
Page 6
5 AGENT MODULES CLASIFICATION
Most of these parameters must be processed as  "delta" or using the data type "generic_data_inc" as 
they are counters.
• Aborted_connects
• Binlog_cache_disk_use
• Binlog_cache_use
• Binlog_stmt_cache_disk_use
• Binlog_stmt_cache_use
• Bytes_received
• Bytes_sent
• Com_admin_commands
• Com_assign_to_keycache
• Com_alter_db
• Com_alter_db_upgrade
• Com_alter_event
• Com_alter_function
• Com_alter_procedure
• Com_alter_server
• Com_alter_table
• Com_alter_tablespace
• Com_analyze
• Com_begin
• Com_binlog
• Com_call_procedure
• Com_change_db
• Com_change_master
• Com_check
• Com_checksum
• Com_commit
• Com_create_db
• Com_create_event
• Com_create_function
• Com_create_index
• Com_create_procedure
• Com_create_server
• Com_create_table
• Com_create_trigger
• Com_create_udf
• Com_create_user
• Com_create_view
• Com_dealloc_sql
• Com_delete
• Com_delete_multi
• Com_do
• Com_drop_db
• Com_drop_event
• Com_drop_function
• Com_drop_index
• Com_drop_procedure
• Com_drop_server
Page 7
• Com_drop_table
• Com_drop_trigger
• Com_drop_user
• Com_drop_view
• Com_empty_query
• Com_execute_sql
• Com_flush
• Com_grant
• Com_ha_close
• Com_ha_open
• Com_ha_read
• Com_help
• Com_insert
• Com_insert_select
• Com_install_plugin
• Com_kill
• Com_load
• Com_lock_tables
• Com_optimize
• Com_preload_keys
• Com_prepare_sql
• Com_purge
• Com_purge_before_date
• Com_release_savepoint
• Com_rename_table
• Com_rename_user
• Com_repair
• Com_replace
• Com_replace_select
• Com_reset
• Com_resignal
• Com_revoke
• Com_revoke_all
• Com_rollback
• Com_rollback_to_savepoint
• Com_savepoint
• Com_select
• Com_set_option
• Com_signal
• Com_show_authors
• Com_show_binlog_events
• Com_show_binlogs
• Com_show_charsets
• Com_show_collations
• Com_show_contributors
• Com_show_create_db
• Com_show_create_event
• Com_show_create_func
• Com_show_create_proc
• Com_show_create_table
• Com_show_create_trigger
• Com_show_databases
• Com_show_engine_logs
Page 8
• Com_show_engine_mutex
• Com_show_engine_status
• Com_show_events
• Com_show_errors
• Com_show_fields
• Com_show_function_status
• Com_show_grants
• Com_show_keys
• Com_show_master_status
• Com_show_open_tables
• Com_show_plugins
• Com_show_privileges
• Com_show_procedure_status
• Com_show_processlist
• Com_show_profile
• Com_show_profiles
• Com_show_relaylog_events
• Com_show_slave_hosts
• Com_show_slave_status
• Com_show_status
• Com_show_storage_engines
• Com_show_table_status
• Com_show_tables
• Com_show_triggers
• Com_show_variables
• Com_show_warnings
• Com_slave_start
• Com_slave_stop
• Com_stmt_close
• Com_stmt_execute
• Com_stmt_fetch
• Com_stmt_prepare
• Com_stmt_reprepare
• Com_stmt_reset
• Com_stmt_send_long_data
• Com_truncate
• Com_uninstall_plugin
• Com_unlock_tables
• Com_update
• Com_update_multi
• Com_xa_commit
• Com_xa_end
• Com_xa_prepare
• Com_xa_recover
• Com_xa_rollback
• Com_xa_start
• Compression
• Connections
• Created_tmp_disk_tables
• Created_tmp_files
• Created_tmp_tables
• Delayed_errors
• Delayed_insert_threads
Page 9
• Delayed_writes
• Flush_commands
• Handler_commit
• Handler_delete
• Handler_discover
• Handler_prepare
• Handler_read_first
• Handler_read_key
• Handler_read_last
• Handler_read_next
• Handler_read_prev
• Handler_read_rnd
• Handler_read_rnd_next
• Handler_rollback
• Handler_savepoint
• Handler_savepoint_rollback
• Handler_update
• Handler_write
• Innodb_buffer_pool_pages_data
• Innodb_buffer_pool_pages_dirty
• Innodb_buffer_pool_pages_flushed
• Innodb_buffer_pool_pages_free
• Innodb_buffer_pool_pages_misc
• Innodb_buffer_pool_pages_total
• Innodb_buffer_pool_read_ahead_rnd
• Innodb_buffer_pool_read_ahead
• Innodb_buffer_pool_read_ahead_evicted
• Innodb_buffer_pool_read_requests
• Innodb_buffer_pool_reads
• Innodb_buffer_pool_wait_free
• Innodb_buffer_pool_write_requests
• Innodb_data_fsyncs
• Innodb_data_pending_fsyncs
• Innodb_data_pending_reads
• Innodb_data_pending_writes
• Innodb_data_read
• Innodb_data_reads
• Innodb_data_writes
• Innodb_data_written
• Innodb_dblwr_pages_written
• Innodb_dblwr_writes
• Innodb_have_atomic_builtins
• Innodb_log_waits
• Innodb_log_write_requests
• Innodb_log_writes
• Innodb_os_log_fsyncs
• Innodb_os_log_pending_fsyncs
• Innodb_os_log_pending_writes
• Innodb_os_log_written
• Innodb_page_size
• Innodb_pages_created
• Innodb_pages_read
• Innodb_pages_written
Page 10
• Innodb_row_lock_current_waits
• Innodb_row_lock_time
• Innodb_row_lock_time_avg
• Innodb_row_lock_time_max
• Innodb_row_lock_waits
• Innodb_rows_deleted
• Innodb_rows_inserted
• Innodb_rows_read
• Innodb_rows_updated
• Innodb_truncated_status_writes
• Key_blocks_not_flushed
• Key_blocks_unused
• Key_blocks_used
• Key_read_requests
• Key_reads
• Key_write_requests
• Key_writes
• Last_query_cost
• Max_used_connections
• Not_flushed_delayed_rows
• Open_files
• Open_streams
• Open_table_definitions
• Open_tables
• Opened_files
• Opened_table_definitions
• Opened_tables
• Performance_schema_cond_classes_lost
• Performance_schema_cond_instances_lost
• Performance_schema_file_classes_lost
• Performance_schema_file_handles_lost
• Performance_schema_file_instances_lost
• Performance_schema_locker_lost
• Performance_schema_mutex_classes_lost
• Performance_schema_mutex_instances_lost
• Performance_schema_rwlock_classes_lost
• Performance_schema_rwlock_instances_lost
• Performance_schema_table_handles_lost
• Performance_schema_table_instances_lost
• Performance_schema_thread_classes_lost
• Performance_schema_thread_instances_lost
• Prepared_stmt_count
• Qcache_free_blocks
• Qcache_free_memory
• Qcache_hits
• Qcache_inserts
• Qcache_lowmem_prunes
• Qcache_not_cached
• Qcache_queries_in_cache
• Qcache_total_blocks
• Queries
• Questions
• Rpl_status
Page 11
• Select_full_join
• Select_full_range_join
• Select_range
• Select_range_check
• Select_scan
• Slave_heartbeat_period
• Slave_open_temp_tables
• Slave_received_heartbeats
• Slave_retried_transactions
• Slave_running
• Slow_launch_threads
• Slow_queries
• Sort_merge_passes
• Sort_range
• Sort_rows
• Sort_scan
• Ssl_accept_renegotiates
• Ssl_accepts
• Ssl_callback_cache_hits
• Ssl_cipher
• Ssl_cipher_list
• Ssl_client_connects
• Ssl_connect_renegotiates
• Ssl_ctx_verify_depth
• Ssl_ctx_verify_mode
• Ssl_default_timeout
• Ssl_finished_accepts
• Ssl_finished_connects
• Ssl_session_cache_hits
• Ssl_session_cache_misses
• Ssl_session_cache_mode
• Ssl_session_cache_overflows
• Ssl_session_cache_size
• Ssl_session_cache_timeouts
• Ssl_sessions_reused
• Ssl_used_session_cache_entries
• Ssl_verify_depth
• Ssl_verify_mode
• Ssl_version
• Table_locks_immediate
• Table_locks_waited
• Tc_log_max_pages_used
• Tc_log_page_size
• Tc_log_page_waits
• Threads_cached
• Threads_connected
• Threads_created
• Threads_running
• Uptime
• Uptime_since_flush_status
Page 12
6 INSTALATION
Copy the plugin to the agent plugin directory, or distribute it with file collections. Do the same with  
the conf.file The call from the agent will be similar to this, but using the paths where the plugin and 
the conf would be installed.
module_plugin perl /etc/pandora/plugins/Pandora_Plugin_mysqlserver_v1r1.pl
/etc/pandora/plugins/mysql.conf
Page 13
7 MONITORING
The plugin monitors “by default” the following things:
• Checking of connectivity with the database.
• Checks if the MySql process is active.
• Checks the server memory (process) .
• Number of connections TIME_WAIT in the system .
• Checks the space in the server disk (usually/var/lib/mysql). 
• Size of the file ibdata1 .
• Search of errors in the database error logs  (usually /var/lib/mysql/mysql.log). 
Besides, it also monitors the following performance parameters:
• Number of MySQL active connections.
• Time of server activity (uptime). 
• Number of aborted connections because of which the client did not close correctly the 
connection.
• Number of bytes got by the clients.
• Information about the server status  (SHOW GLOBAL STATUS or SHOW STATUS). 
• Information about the status of InnoDB (SHOW INNODB STATUS) .
• Number of bytes sent by clients.
• Number of database entries. 
• Number of  locks on tables on the database when doing a transaction.
• Active locks on tables and registers for each active session.
• Not answered queries from  I/0 
• Total data size in GB. 
All these modules comes parametrized in the “mysql.conf” file that comes with the plugin package. 
These modules could be deleted or extended by a MySQL administrator.
Page 14
8 PLUGIN PARAMETRIZATION
The plugin is used after having previously configured the configuration external file.
NOTE: It is extremely important to consider that the configuration files that are though for the plugin in  
UNIX should be edited and stored with carriage return kind “UNIX” and that carriage return kind  
“WINDOWS” are used, then the plugin will be not work correctly.
There are three functional blocks in the configuration file:
8.1.  MySQL Access Configuration and General data
In order that the plugin could monitor  the database, you should give the access credentials and 
some general data that after will be used in the checkings:
8.1.1.  MySQL user, password and host
The access credentials should be fulfill in the following way:
conf_mysql_user mysql
conf_mysql_pass 1234
conf_mysql_host 127.0.0.1
There is the possibility that we have a blank password mysql user. When mysql pass is empty 
comment the line (#conf_mysql_pass).
8.1.2.  General Data
Here should be specifyed  the MySQL home directory (usually /var/lib/mysql),  the log file, one 
directory for temporary files and the complete path to the plugin of Pandora logs parse:
conf_mysql_homedir /var/lib/mysql
conf_mysql_logfile /var/log/mysql.log
conf_temp /tmp
conf_logparser /etc/pandora/plugins/grep_log
Page 15
8.2. System Parameters
Next are described the system specific checking modules
8.2.1. System Checking Block
A block of system checking in the configuration file is like this:
check_begin
# Linea de comentario.
<token of system check>
check_end
Next are described the plugin checks:
8.2.2. Checking the connectivity with the database 
With this check, it is  posible to check if the database has connectivity with other software elements. If  
this check is not satifactory, then the monitoring will be aborted.
check_begin
check_mysql_service
check_end
8.2.3. Check if the MySQL process is active 
This check verifies that the MySQL process is active in the system:
check_begin
check_mysql_service
check_end
8.2.4. Server memory Check (process)
Throug this check we verify the MySQL server memory usage.
check_begin
check_mysql_memory
check_end
Page 16
8.2.5.  Number of TIME_WAIT connections in the system
It shows the number of connections in TIME_WAIT status in the system:
check_begin
check_system_timewait
check_end
8.2.6. Server disk space check 
Checks the space in the disk (in KB) by the database. It will be check the size of the homedir MySQL  
directory specifying in the General data section: 
check_begin
check_system_diskusage
check_end
8.2.7. Size of the ibdata1 File
Checks the size (in KB) of the ibdata 1 file that is at the homedir MySQLdirectory:
check_begin
check_mysql_ibdata1
check_end
8.2.8. Searching errors in the error logs of the database 
It will search the “ERROR” string in the log file specified in the General data section. This module 
will always return the data kind async_string, and in case that the check get return data, the 
associated  command   will   be  executed  (explained   in the  section    8.5.  Executing  comands   on 
condition ):
check_begin
check_mysql_logs
check_end
Page 17
8.3. Performance parameters
Next are described the modules of performance check.
8.3.1.  Block of performance check 
Similar to the system checks as we show next:
check_begin
# Linea de comentario.
<token of commentary check>
check_end
Next are show the performance check blocks:
8.3.2.  Number of MySQL active connections 
It returns the number of active connections in the database:
check_begin
mysql_status Full processlist
check_end
8.3.3.  Number of aborted connections due to the client did not close correctly the 
connection.
check_begin
mysql_status Aborted_connects
check_end
8.3.4.   Number of bytes get by the clients.
check_begin
mysql_status Bytes_received
check_end
Page 18
8.3.5.  Number of bytes sent by the clients
check_begin
mysql_status Bytes_sent
check_end
8.3.6.  Information of the server status  (SHOW GLOBAL STATUS ó SHOW STATUS)
These queries are based on the MySQL command   SHOW GLOBAL STATUS. It is posible to do 
searchs of some token and its associated value inside the data returned by this command.
check_begin
mysql_status <token to search>
check_end
8.3.7.  Information of the InnoDB status (SHOW INNODB STATUS)
These queries are based on the MySQL command    SHOW INNODB STATUS. Between the data 
returned by this command it is posible to search some token and its associated value: 
check_begin
check_name <check_name>
mysql_innodb <token to search in innodb status>
check_end
8.3.8.  Number of insertions in the data base
Number of transactions kind INSERT done in the database:
check_begin
mysql_status Com_insert
check_end
Page 19
8.3.9. Number of locks on tables in the database when doing a transaction 
check_begin
mysql_status Com_lock_tables
check_end
8.3.10. Active locks on tables and registers for each active sesion 
check_begin
# Number of locks over DB tables
mysql_status Table_locks_waited
check_end
check_begin
# Number of row locks
mysql_status Innodb_row_lock_waits
check_end
8.3.11. I/0 Requests  pending
check_begin
mysql_status Pending_io
check_end
8.3.12.  Total size of data in GB
check_begin
mysql_status Total_size
check_end
Page 20
8.4. Monitoring via SQL
One of the most powerful features of the plugin is the posibility of specify its own SQL order to get 
the value. Lets see some example:
check_begin
check_name num_tables
check_schema information_schema
check_sql SELECT COUNT(*) FROM tables
check_end
Check_name  The name of the check that will be shown on the Pandora interface.
Check_sql  The query that should return a simple data (number or string).
Check_schema The MySQL schema to which the plugin will be connectedin order to do the query.
8.5. Execution of commands depending on conditions
In all modules it would be posible to specify the execution of one command if one condition is 
fulfilled. These conditions could be:
• == (equal to one value) 
• != (Different from one value) 
• < (lower than a given value) 
• > (Bigger than a given value). 
If the condition is fullfilled, then the configured command will be executed with the token  
 post_execution. In case of the  check_mysql_logs check, the command will be executed if this check 
returns some data.
One example of this configuration is this:
check_begin
check_mysql_cpu
post_condition > 95
post_execution snmptrap -v 1 -c public x.x.x.x 1.2.4.4.65.6.4.3 6 128
check_end
Page 21
8.6. Parameterization of the command associated to a check
As we have mentioned before, in each check one command to execute could be configured if the 
condition is fulfilled. Besides, it is posible to use one token in the command in order that if this is 
being executed, then it would be remplaced by the check value. For example, through the _DATA_ 
macro in this example, the content of the check is saved on  /tmp/mysql_cpu_result the file: 
check_begin
check_mysql_cpu
post_condition > 95
post_execution echo _DATA_ >> /tmp/mysql_cpu_result
check_end
8.7. Module status 
Besides, the modules will return a status if it is required  with  the configuration token: 
post_status WARNING
O also: 
post_status CRITICAL
8.8. Kind of data 
By default, all monitors will return  generic_data, unless that the following configuration token 
would be shown.
module_type generic_data_inc
module_type async_string
(or other valid)
The only exception is the monitor  check_mysql_service  with automatically one module kind 
generic_proc. 
Page 22
8.9. Data management in checks of kind of performance
In checks of kind of performance and SQL queries, it is posible to configure it in order that the 
absolute value would be returned, as MySQL data_absolute) returns it (or the difference between 
the actual data and the previous one (data_delta).In the first execution of the check configured 
with data_delta, no data will be returned. From the second execution on , the increase will be 
returned.
If, for example, should be the case that the difference between the current data an the previous 
one would be negative, then the value of the check will be reseted and the check will not return 
any data.
By default the checks of kind of performance will be configured as data_absolute.. For example, this 
check will return the increase of the active ssesions in MySQL:
check_begin
mysql_status Full processlist
data_delta
check_end
Page 23

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Pandora FMS: Mysql Server Monitoring