PHYLOGENETICS:
Evolution
Seamon
Fossil- remains or imprints of once-living
organisms found in layers of rock
Fossil record- historical timeline based on fossils
found in Earth’s crust
CONNECTING:
* Fossils are hard to form & find (esp. on land)
* There are blank places in our record
* Disturbances in the strata/rock record
1858: 1st almost complete dino skeleton found
HOW DO FOSSILS FORM?
Petrified Fossil: fossil completely turns to stone
1. Organism dies in right place: sediments cover (lake
bottom, mud flats)
2. Soft parts decay or are eaten
3. Sediments layer; pressure causes sediments to fuse
together, encasing organism like a shell
4. Ground water with minerals seeps around the bones;
minerals left in bone spaces & may replace whole bone
5. Rock layer needs uplifted & layers above eroded for
fossil to be DISCOVERED
Scientists use logic & carbon dating to
sequence & draw connections among fossil
findings all over the world
What do scientists do?
Compare skeletal structure of fossils and
animals alive today
Date the fossils
Put into logical order as new fossils are found
Compare DNA and other macromolecules in
animals alive today
http://abyss.uoregon.edu/~js/lectures/age_of_the_earth/age_of_the_earth.html
http://www.ucmp.berkeley.edu/fo
srec/McKinney.html
Which rocks
are oldest?
Most recent?
Which fossils
would be
oldest?
Most recent?
A: Most recent
rocks-
Those on top &
those cutting
through others
SIMILAR STRUCTURE? = TWO REASONS:
Homologous structures same structure,
different function; evolved from common ancestor
human arm, horse leg, bird wing
Analogous structures performs same function;
evolved from different origins (independently)
WINGS: birds, bats, butterflies
ADVANCE
Analogous Structureshttp://web1.d25.k12.id.us/home/staff/rudeer/homoanalvestig.html
Homologous Structures
Homologous Structures
BACKhttp://itc.gsw.edu/faculty/bcarter/histg
eol/paleo2/homol1.htm
Analogous Structures
http://web1.d25.k12.id.us/home/staff/rudeer/homoanalvestig.html
Homologous vs. Analogous
Evidence of Common Ancestor
Homologous vs. Analogous
Vistigial Structures: structures that have
lost their ancestral use in a species but
have been retained
through evolution
EXAMPLE:
Whale
Evolution
p. 619
http://evolution.berkeley.edu/evosite/e
vo101/images/whaleancestors.gif
Macromolecules
• Compare amino acid or DNA sequences
between species
• Counting the number of mutations
• More differences = Further apart in evolution
CHARLES DARWIN
A HISTORY LESSON:
Charles Darwin: 1809- 1882, naturalist who
voyaged on the HMS Beagle as a young man & is
know as the founder of the idea of natural selection
later in life…
…really a THINKER, who put
together the ideas of many
contemporaries.
He collected plant and animal samples, esp. off
the coast of Ecuador in the Galapagos Islands
http://upload.wikimedia.org/wikipedia/commons/4/42/Voyage_of_the_Beagle.jpg
VIDEO:
Galapag
os Island
3 min
•Noticed that plants and animals on the islands
looked similar to those in Ecuador with minor
variations (differences)
•This got him to thinking
The beaks were
suited to what
the birds ate on
each island!
: www.biology-
online.org/2/11_natural_selection.htm
•traits- specific characteristics that can be
passed from parent to offspring through genes
•An example:
•Selective breeding- humans select desired
traits in plant/animal and breed it for more
(150+ breeds of dogs)
•Thomas Malthus wrote An Essay on the
Principle of Population: an essay that said
humans had the potential to reproduce too fast
for the food supply
•Said that human populations are LIMITED to
choices humans make & available
resources/disease
•Darwin thought then, that populations of all
species were limited:
•LIMITING FACTORS:
•Starvation
•Disease
•Competition
•Predation
•So, only a limited number survive to reproduce
What was special about the survivors?
•Offspring inherit traits to survive in the
environment
•Darwin thought species could evolve over time
***MOST geologists at that time thought the Earth
wasn’t old enough for that
What was special about the survivors?
VIDEO: Evolution Adaptation 2 min
•Charles Lyell a geologist, wrote Principles of
Geology; said Earth was formed by natural
processes over a LONG period of time
•Darwin struggled with ideas for 20 yrs
•Alfred Russell Wallace 1858 a naturalist, writing
to Darwin; shared the same ideas
•1859 Darwin published his ideas: On the Origin
of Species by Means of Natural Selection
Common ancestors
•New forms are modified
forms of older ones
DARWIN’S THEORY:
Descent with Modification
Glyptodonts
Lead to
Armadillos
Natural Selection
•Some traits are better suited to the
environment than others.
•Competition for resources leads to
Natural Selection of fittest traits.
DARWIN’S THEORY:
Modification by Natural Selection
• Natural Selection process by which individuals
are better adapted to survive and reproduce than
others & pass along those genes to offspring
• Theory lacked some evidence, but later
scientists filled in the holes
1. Overproduction: producing more potential babies
than will survive
2. Inherited variation: each individual is slightly
different, not exactly like parent
3. Struggle to survive: some will die, disease,
competition, predators, but ALL won’t
4. Successful reproduction: those most adapted to
environment will have offspring with traits like them
VIDEO 1 Evolution of organic life 2min VIDEO 2 Natural Selection 2 min
CC VIDEO: #14 Natural Selection (12 min)
Natural Selection
Fitness and
Adaptations
In any population…
There is genetic
variation.
An adaptation is
any characteristic
that increases
fitness.
Fitness is the
ability to survive
and reproduce.
A heritable characteristic is
influenced by genes and passed
from parents to offspring.
Heritable adaptive characteristics
become more common in a
population over many generations.
This process is called evolution by
natural selection.
Populations have normal variation
caused by mutations in an allele.
The allele with the mutation is
inherited.
Over time, more individuals have
the allele with the mutation
Therefore, populations change
over time.
Evolution
A change in the
allele
frequency in a
population
Natural
Selection
If a trait increases
reproductive success
AND is inherited, then
more offspring will have
the trait.
Populations adapt to
their environment as
more individuals have
that trait.
Individuals do
not adapt.
Evolution
• Mutations and Sexual Reproduction
Genetic
Variation
• Random changes in allele
frequencyGenetic Drift
• Movement of allelesMigration
• Some organisms survive and
reproduce better than others
Natural
Selection
Genetic Variation
Genetic Recombination in
sexual reproduction
GeneticDrift
Random changes in allele frequency
GeneticDrift
Physical separation  Genetic separation
A population is split and two genetically
different populations form.
Migration
Gene Flow
•Speciation formation of a new species; species
become so different, they can’t mate any longer
•Separation new adaptation can’t
mate when go
back to original
population
SEPARATORS:
Canyon
Mountain range
Lake
humans
Textbook:
HoltScience&Technology6thGrade
CC VIDEO: Speciation of Ligers & Men (12 min)
Rates of Speciation
Punctuated Speciation
• Sudden shift (change)
• Fossils suggest this is more
common
Gradual Speciation
• Stable rate
Cytochrome C Comparisons
Cytochrome C Cladogram
Modern Examples of
Evolution
•Tusk-less elephants are proving
beneficial against poachers &
are living to reproduce offspring
without tusks as well
EXAMPLES:
African Elephant
http://www.wildlife-pictures-
online.com/elephant_epkp4.html
HSW- LINK (elephant evoln) 4 min
•During Industrial Revolution,
soot covered the trees in
Europe. White moths stood
out & were eaten; black moths
reproduced & white moths
almost gone
EXAMPLES:
Peppered moth
http://sisu.typepad.com/sisu/pepperedm
othslichen.jpg
www.amentsoc.org/about/news/0111/
http://radaractive.blogspot.com/2009/07/in-regards-to-canards-
natural-selection.html
•Pesticide
resistance:
resistant
individuals live to
reproduce &
pass on resistant
genes. Insects
produce LOTS of
offspring
EXAMPLES:
http://www.grapes.msu.edu/images/pesticResist.
gif
www.grapes.msu.edu/pesticideResist.htm
•Super viruses
•Same flu shots not work each year
•Antibiotic resistance
EXAMPLES:
virusBacteria: staph
www.healthheap.com/tag/bacteria
http://health.howstuffworks.com/medicine/mo
dern/light-virus.htm
Combating
Resistance
Flu Virus Resistance to Antiviral Drugs
Each year, the
flu vaccine
protects
against only a
few strains.
Flu Vaccines and Evolution
Vaccines help us make antibodies and build
immunity to diseases.
Our immune system has evolved to build
antibodies against any disease.
Evidence
of
Evolution
• Fossil Record
• Homologous Structures
• Analogous Structures
• Vestigal Structures
• Macromolecules
• Modern examples

Phylogenetics: Evolution