December 11, 2023
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Updated department name.

Markus Riester authored on 11/12/2023 21:11:51
September 23, 2023
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Added documentation for #320.

Markus Riester authored on 23/09/2023 22:20:04
February 2, 2022
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Added chunks paramater to calculateBamCoverageByInternal (#218).

Markus Riester authored on 02/02/2022 21:48:29
December 22, 2021
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Minor documentation updates (closes #214).

Markus Riester authored on 22/12/2021 20:47:20
December 19, 2021
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Minor documentation updates

Markus Riester authored on 19/12/2021 20:06:45
December 14, 2021
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Some minor code cleanups.

Markus Riester authored on 14/12/2021 02:39:36
September 19, 2021
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Version bump to make next stable 2.0; linting of some older code.

Markus Riester authored on 19/09/2021 18:58:19
September 13, 2021
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Missed to replace --infile with --in-file.

Markus Riester authored on 13/09/2021 20:14:55
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Random trivial fixes for the previous commits.

Markus Riester authored on 13/09/2021 17:23:33
September 12, 2021
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Make Cosmic.CNT configurable, make it possible to add Cosmic VCF in PureCN.R (https://support.bioconductor.org/p/9139446/)

Markus Riester authored on 12/09/2021 01:08:00
September 11, 2021
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Cleanup of command line arguments; added min.normals.position.specific.fit to calculateMappingBias.

Markus Riester authored on 11/09/2021 20:24:35
September 10, 2021
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Attempt in wrapping some error checking around parallel code (#197).

Markus Riester authored on 10/09/2021 19:10:17
September 5, 2021
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Various tweaks to the new mapping bias code; documentation updates.

Markus Riester authored on 05/09/2021 20:57:57
August 12, 2021
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Potential fix for crash in variant fitting. Make it possible to set min.fraction.offtarget in PureCN.R.

Markus Riester authored on 12/08/2021 04:46:48
August 3, 2021
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Make segmentationPSCBS require VCF. Some random linting.

Markus Riester authored on 03/08/2021 22:10:37