Package: gcatest
Title: Genotype Conditional Association TEST
Version: 2.9.0
Authors@R: c(
    person(given = "Wei",
	   family = "Hao",
	   role = "aut",
	   email = "[email protected]"),
    person(given = "Minsun",
	   family = "Song",
	   role = "aut"),
    person(given = "Alejandro",
	   family = "Ochoa",
	   role = c("aut", "cre"),
	   email = "[email protected]",
           comment = c(ORCID = "0000-0003-4928-3403")),
    person(given = "John D.",
           family = "Storey",
	   role = "aut",
	   email = "[email protected]",
           comment = c(ORCID = "0000-0001-5992-402X"))
    )
Encoding: UTF-8
LazyData: true
Description: GCAT is an association test for genome wide association studies that controls for population structure under a general class of trait models.  This test conditions on the trait, which makes it immune to confounding by unmodeled environmental factors.  Population structure is modeled via logistic factors, which are estimated using the `lfa` package.
Imports:
    methods,
    lfa
Depends:
    R (>= 4.0)
Suggests:
    knitr,
    ggplot2,
    testthat,
    BEDMatrix,
    genio
VignetteBuilder: knitr
License: GPL (>= 3)
biocViews: SNP, DimensionReduction, PrincipalComponent, GenomeWideAssociation
BugReports: https://github.com/StoreyLab/gcatest/issues
URL: https://github.com/StoreyLab/gcatest
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3