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Automated machine learning for analyzing, interpreting, and designing biological sequences

Jupyter Notebook 173 26 Updated Aug 3, 2023

3D-printable hexagonal mirror array capable of reflecting sunlight into arbitrary patterns

Jupyter Notebook 2,523 148 Updated Jan 3, 2022

Fit and plot neutralization curves

Jupyter Notebook 9 4 Updated Nov 4, 2025

Cloud-native genomic dataframes and batch computing

Python 1,065 266 Updated Jul 1, 2026

Analysis tools for PhIP-seq experiments

Jupyter Notebook 12 9 Updated Jan 24, 2022

Code from works by Reid D. Landes & colleagues

R 1 Updated Oct 7, 2019

Code for Swift project to extract acceleration from Apple Watch during sleep - currently under construction

Swift 69 14 Updated Feb 3, 2024

Shiny App for myDNA R package

R 1 Updated Sep 8, 2019

myDNA package for summer school of science

R 3 2 Updated Dec 14, 2019
Python 5 4 Updated Mar 19, 2018

Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019

2,018 386 Updated May 24, 2020

Peptide library design

Jupyter Notebook 23 7 Updated Sep 8, 2020

Simulator for N-of-1 stochastic time-series model

R 5 1 Updated Jan 9, 2020

Create explorable explanations and interactive essays.

JavaScript 2,036 87 Updated Feb 4, 2023

Sequential regulatory activity predictions with deep convolutional neural networks.

Python 472 138 Updated Jan 15, 2026

Repo for NYU's ITP "Quant Humanists: the 'I' in API" course

HTML 16 8 Updated Apr 30, 2018

The Rails app behind iNaturalist.org

JavaScript 829 230 Updated Jul 1, 2026

Documenting design patterns that help teams design trustworthy services that work for people

CSS 68 12 Updated Jun 30, 2026

Social Determinants of Health Visualization

HTML 91 24 Updated Feb 4, 2022

DIYbiosphere is an open-source project to collect Do-it-Yourself Biology (DIYbio) initiatives from all over the world

JavaScript 113 61 Updated Sep 19, 2025

The go-to place for materials, contributions and work for the 2015 Mozilla Fellows for Science.

16 10 Updated Apr 12, 2019
Perl 199 56 Updated Jun 20, 2023

Phinch is an open-source framework for visualizing biological data, funded by a grant from the Alfred P. Sloan foundation. This project represents an interdisciplinary collaboration between Pitch I…

PHP 10 2 Updated Sep 13, 2014

Contents of the site

HTML 482 54 Updated Feb 17, 2021

Language tools for DataTags (Decision graph variant). Including the embeddable runtime engine

Java 8 11 Updated Apr 18, 2024

Fluxtream Web Application and Core Modules

Java 152 50 Updated Dec 16, 2022
Python 2 Updated Jan 31, 2014

Repository of Sample CCDA Documents -- all comers welcome!

XSLT 256 304 Updated Oct 15, 2016

Spec for BlueButton+ Pull

HTML 20 10 Updated Sep 7, 2015

Dataverse Network (DVN) 3.x, distinct from the newer code base at https://github.com/IQSS/dataverse

Java 25 17 Updated Jun 4, 2015
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