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Starred repositories

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Formal specification of Property Graph Exchange Format and its serializations

CSS 5 1 Updated May 31, 2025

Disease Mechanisms KB

HTML 6 Updated Dec 28, 2025

Validate that supporting text quotes in your data actually appear in their cited references

Python 10 Updated Jan 1, 2026

SPARQL graph database

Rust 1,435 103 Updated Jan 2, 2026

AI Atlas Nexus: tooling to bring together resources related to governance of foundation models.

Cypher 112 24 Updated Dec 22, 2025

Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.

16 1 Updated Nov 22, 2022
Python 3 Updated Dec 8, 2025

Prediction and curation of semantic mappings in SSSOM

Python 4 Updated Dec 29, 2025

VCF visualization interface

HTML 176 51 Updated Dec 19, 2025

Claude skills for a variety of curation and knowledge-based tasks. We currently have 3 skills included, but intend to grow this.

Perl 14 2 Updated Dec 22, 2025

Repository for the DataCite profile of DCAT-AP

XSLT 6 2 Updated Feb 13, 2025

Precision Medicine Knowledge Graph (PrimeKG)

Jupyter Notebook 683 132 Updated May 27, 2024
Just 8 3 Updated Dec 22, 2025
Python 34 7 Updated Jan 3, 2026

Copier template for adding AI integrations to a GH repo

Jinja 9 Updated Nov 13, 2025

A simple registry for KGHub projects

Python 20 4 Updated Jan 3, 2026

The home repository for the (Re)usable Data Project.

JavaScript 14 11 Updated Sep 22, 2025

A model context protocol (MCP) to help agents interact with ontologies and the ontology access kit

Python 5 Updated Jul 8, 2025

Generates and runs evaluation benchmarks for ontology changes

Python 2 Updated Jul 8, 2025

A repository for the BCIO ontology

Python 39 6 Updated Dec 18, 2025

The OHD is an ontology for representing the diagnosis and treatment of dental maladies.

Common Lisp 11 9 Updated Dec 24, 2025

🛣️ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings

Python 11 1 Updated Oct 20, 2025

Simple Standard for Sharing Ontology Mappings (SSOM) JavaScript library

JavaScript 3 Updated Sep 5, 2025

Logic plus python types

Python 19 1 Updated Dec 21, 2025

A motley crew of agents developed by the Monarch Initiative

Python 21 3 Updated Nov 17, 2025

Managing the progress for the RDA Working Group on Fair Mappings (https://www.rd-alliance.org/groups/fair-mappings-wg/).

Makefile 11 10 Updated Dec 23, 2025

[WIP] ontology mapping using LLMs and RAG

R 9 2 Updated Jun 30, 2025

A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies

Ruby 3 2 Updated Oct 11, 2025

A repository for version control of consortium data model(s)

Jupyter Notebook 16 4 Updated Dec 8, 2025

Import and Export CSV Data With a YAML Metadata Header

R 61 2 Updated Jun 11, 2020
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