Open Source Python Data Management Systems for Linux

Python Data Management Systems for Linux

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  • 1
    Avogadro

    Avogadro

    An intuitive molecular editor and visualization tool

    Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.
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    Downloads: 4,702 This Week
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  • 2
    FreeImage is a library project for developers who would like to support popular graphics image formats (PNG, JPEG, TIFF, BMP and others). Some highlights are: extremely simple in use, not limited to the local PC (unique FreeImageIO) and Plugin driven!
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    Downloads: 2,001 This Week
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  • 3
    Gwyddion

    Gwyddion

    Scanning probe microscopy data visualisation and analysis

    A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis.
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    Downloads: 1,226 This Week
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  • 4
    SciDAVis is a user-friendly data analysis and visualization program primarily aimed at high-quality plotting of scientific data. It strives to combine an intuitive, easy-to-use graphical user interface with powerful features such as Python scriptability.
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    Downloads: 1,167 This Week
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  • Grafana: The open and composable observability platform Icon
    Grafana: The open and composable observability platform

    Faster answers, predictable costs, and no lock-in built by the team helping to make observability accessible to anyone.

    Grafana is the open source analytics & monitoring solution for every database.
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  • 5
    GMAT

    GMAT

    General Mission Analysis Tool

    The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2025a. For a complete list of new features, compatibility changes, and bug fixes, see the R2025a Release Notes in the Users Guide.
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    Downloads: 742 This Week
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  • 6
    Orange Data Mining

    Orange Data Mining

    Orange: Interactive data analysis

    Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox. Perform simple data analysis with clever data visualization. Explore statistical distributions, box plots and scatter plots, or dive deeper with decision trees, hierarchical clustering, heatmaps, MDS and linear projections. Even your multidimensional data can become sensible in 2D, especially with clever attribute ranking and selections. Interactive data exploration for rapid qualitative analysis with clean visualizations. Graphic user interface allows you to focus on exploratory data analysis instead of coding, while clever defaults make fast prototyping of a data analysis workflow extremely easy. Place widgets on the canvas, connect them, load your datasets and harvest the insight! When teaching data mining, we like to illustrate rather than only explain.
    Downloads: 68 This Week
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  • 7
    pandas

    pandas

    Fast, flexible and powerful Python data analysis toolkit

    pandas is a Python data analysis library that provides high-performance, user friendly data structures and data analysis tools for the Python programming language. It enables you to carry out entire data analysis workflows in Python without having to switch to a more domain specific language. With pandas, performance, productivity and collaboration in doing data analysis in Python can significantly increase. pandas is continuously being developed to be a fundamental high-level building block for doing practical, real world data analysis in Python, as well as powerful and flexible open source data analysis/ manipulation tool for any language.
    Downloads: 66 This Week
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  • 8
    Matplotlib

    Matplotlib

    matplotlib: plotting with Python

    Matplotlib is a comprehensive library for creating static, animated, and interactive visualizations in Python. Matplotlib makes easy things easy and hard things possible. Matplotlib ships with several add-on toolkits, including 3D plotting with mplot3d, axes helpers in axes_grid1 and axis helpers in axisartist. A large number of third party packages extend and build on Matplotlib functionality, including several higher-level plotting interfaces (seaborn, HoloViews, ggplot, ...), and a projection and mapping toolkit (Cartopy). Matplotlib is the brainchild of John Hunter (1968-2012), who, along with its many contributors, have put an immeasurable amount of time and effort into producing a piece of software utilized by thousands of scientists worldwide. Matplotlib is a Sponsored Project of NumFOCUS, a 501(c)(3) nonprofit charity in the United States. Matplotlib has support for visualizing information with a wide array of colors and colormaps.
    Downloads: 36 This Week
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  • 9
    dxf2gcode

    dxf2gcode

    DXF2GCODE: converting 2D dxf drawings to CNC machine compatible G-Code

    DXF2GCODE is a tool for converting 2D (dxf, pdf, ps) drawings to CNC machine compatible GCode. Windows, Linux, and Mac support by using python scripting language.
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    Downloads: 331 This Week
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  • 10
    Asymptote

    Asymptote

    2D & 3D TeX-Aware Vector Graphics Language

    Asymptote is a powerful descriptive vector graphics language for technical drawing, inspired by MetaPost but with an improved C++-like syntax. Asymptote provides for figures the same high-quality typesetting that LaTeX does for scientific text.
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    Downloads: 155 This Week
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  • 11
    K-3D is the free (as in freedom) 3d modeling, animation, and rendering system.
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    Downloads: 150 This Week
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  • 12
    PyMca
    Stand-alone application and Python tools for interactive and/or batch processing analysis of X-Ray Fluorescence Spectra. Graphical user interface (GUI) and batch processing capabilities provided.
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    Downloads: 177 This Week
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  • 13
    scikit-learn

    scikit-learn

    Machine learning in Python

    scikit-learn is an open source Python module for machine learning built on NumPy, SciPy and matplotlib. It offers simple and efficient tools for predictive data analysis and is reusable in various contexts.
    Downloads: 30 This Week
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  • 14
    The Timeline Project

    The Timeline Project

    Cross-platform app for displaying and navigating events on a timeline.

    The Timeline Project aims to create a free, cross-platform application for displaying and navigating events on a timeline.
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    Downloads: 120 This Week
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  • 15
    TexGen
    TexGen is a geometric textile modelling software package to be used for obtaining engineering properties of woven textiles and textile composites. Citing TexGen We would be grateful if you could acknowledge use of TexGen where appropriate and suggest using one of the following references: L P Brown and A C Long. "Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. P Boisse, Woodhead Publishing Ltd, 2021, ISBN: 978-0-12-819005-0. https://doi.org/10.1016/B978-0-12-819005-0.00008-3 Lin, H., Brown, L. P. & Long, A. C. 2011. Modelling and Simulating Textile Structures using TexGen. Advanced Materials Research, 331, 44-47. To reference version 3.13.0 please use: Louise Brown, mike-matveev, & georgespackman. (2023). louisepb/TexGen: TexGen v3.13.1 (v3.13.1). Zenodo. https://doi.org/10.5281/zenodo.8221491
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    Downloads: 192 This Week
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  • 16
    Airbyte

    Airbyte

    Data integration platform for ELT pipelines from APIs, databases

    We believe that only an open-source solution to data movement can cover the long tail of data sources while empowering data engineers to customize existing connectors. Our ultimate vision is to help you move data from any source to any destination. Airbyte already provides the largest catalog of 300+ connectors for APIs, databases, data warehouses, and data lakes. Moving critical data with Airbyte is as easy and reliable as flipping on a switch. Our teams process more than 300 billion rows each month for ambitious businesses of all sizes. Enable your data engineering teams to focus on projects that are more valuable to your business. Building and maintaining custom connectors have become 5x easier with Airbyte. With an average response rate of 10 minutes or less and a Customer Satisfaction score of 96/100, our team is ready to support your data integration journey all over the world.
    Downloads: 19 This Week
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  • 17
    matplotlib
    Matplotlib is a python library for making publication quality plots using a syntax familiar to MATLAB users. Matplotlib uses numpy for numerics. Output formats include PDF, Postscript, SVG, and PNG, as well as screen display. As of matplotlib version 1.5, we are no longer making file releases available on SourceForge. Please visit http://matplotlib.org/users/installing.html for help obtaining matplotlib.
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    Downloads: 84 This Week
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  • 18
    HEALPix

    HEALPix

    Data Analysis, Simulations and Visualization on the Sphere

    Software for pixelization, hierarchical indexation, synthesis, analysis, and visualization of data on the sphere. Please acknowledge HEALPix by quoting the web page http://healpix.sourceforge.net (or https://healpix.sourceforge.io) and publication: K.M. Gorski et al., 2005, Ap.J., 622, p.759 Full software documentation available at https://healpix.sourceforge.io/documentation.php Wiki Pages: https://sourceforge.net/p/healpix/wiki/Home Exchanging Data with HEALPix (in FITS files): https://sourceforge.net/p/healpix/wiki/Exchanging%20Data%20with%20HEALPix/ GDL and FL users should read https://sourceforge.net/p/healpix/wiki/HEALPix%20and%20GDL/
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    Downloads: 407 This Week
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  • 19

    PLplot

    Cross-platform, scientific graphics plotting library

    PLplot is a cross-platform, scientific graphics plotting library that supports math symbols and human languages (via UTF-8 user input strings); plot capabilities for multiple non-interactive plot file formats and in multiple interactive environments; and bindings for multiple computer languages.
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    Downloads: 82 This Week
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  • 20
    MinerU

    MinerU

    A high-quality tool for convert PDF to Markdown and JSON

    MinerU is an open-source, high-quality document extraction toolkit focused on converting PDFs (and other document formats) into structured Markdown and JSON. It leverages OCR and layout analysis to preserve semantic structure and metadata, ideal for research and data science workflows.
    Downloads: 13 This Week
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  • 21
    Diffgram

    Diffgram

    Training data (data labeling, annotation, workflow) for all data types

    From ingesting data to exploring it, annotating it, and managing workflows. Diffgram is a single application that will improve your data labeling and bring all aspects of training data under a single roof. Diffgram is world’s first truly open source training data platform that focuses on giving its users an unlimited experience. This is aimed to reduce your data labeling bills and increase your Training Data Quality. Training Data is the art of supervising machines through data. This includes the activities of annotation, which produces structured data; ready to be consumed by a machine learning model. Annotation is required because raw media is considered to be unstructured and not usable without it. That’s why training data is required for many modern machine learning use cases including computer vision, natural language processing and speech recognition.
    Downloads: 10 This Week
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  • 22
    seaborn

    seaborn

    Statistical data visualization in Python

    Seaborn is a Python data visualization library based on matplotlib. It provides a high-level interface for drawing attractive and informative statistical graphics. Seaborn helps you explore and understand your data. Its plotting functions operate on dataframes and arrays containing whole datasets and internally perform the necessary semantic mapping and statistical aggregation to produce informative plots. Its dataset-oriented, declarative API lets you focus on what the different elements of your plots mean, rather than on the details of how to draw them. Behind the scenes, seaborn uses matplotlib to draw its plots. For interactive work, it’s recommended to use a Jupyter/IPython interface in matplotlib mode, or else you’ll have to call matplotlib.pyplot.show() when you want to see the plot.
    Downloads: 9 This Week
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  • 23
    DataChain

    DataChain

    AI-data warehouse to enrich, transform and analyze unstructured data

    Datachain enables multimodal API calls and local AI inferences to run in parallel over many samples as chained operations. The resulting datasets can be saved, versioned, and sent directly to PyTorch and TensorFlow for training. Datachain can persist features of Python objects returned by AI models, and enables vectorized analytical operations over them. The typical use cases are data curation, LLM analytics and validation, image segmentation, pose detection, and GenAI alignment. Datachain is especially helpful if batch operations can be optimized – for instance, when synchronous API calls can be parallelized or where an LLM API offers batch processing.
    Downloads: 8 This Week
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  • 24
    folium

    folium

    Python data, Leaflet.js maps

    folium builds on the data wrangling strengths of the Python ecosystem and the mapping strengths of the leaflet.js library. Manipulate your data in Python, then visualize it in on a Leaflet map via folium. folium makes it easy to visualize data that’s been manipulated in Python on an interactive leaflet map. It enables both the binding of data to a map for choropleth visualizations as well as passing rich vector/raster/HTML visualizations as markers on the map. The library has a number of built-in tilesets from OpenStreetMap, Mapbox, and Stamen, and supports custom tilesets with Mapbox or Cloudmade API keys. folium supports both Image, Video, GeoJSON and TopoJSON overlays. To create a base map, simply pass your starting coordinates to Folium. To display it in a Jupyter notebook, simply ask for the object representation. The default tiles are set to OpenStreetMap, but Stamen Terrain, Stamen Toner, Mapbox Bright, and Mapbox Control Room, and many others tiles are built in.
    Downloads: 7 This Week
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  • 25
    Positron

    Positron

    Positron, a next-generation data science IDE

    Positron is a next-generation integrated development environment (IDE) created by Posit PBC (formerly RStudio Inc) specifically tailored for data science workflows in Python, R, and multi-language ecosystems. It aims to unify exploratory data analysis, production code, and data-app authoring in a single environment so that data scientists move from “question → insight → application” without switching tools. Built on the open-source Code-OSS foundation, Positron provides a familiar coding experience along with specialized panes and tooling for variable inspection, data-frame viewing, plotting previews, and interactive consoles designed for analytical work. The IDE supports notebook and script workflows, integration of data-app frameworks (such as Shiny, Streamlit, Dash), database and cloud connections, and built-in AI-assisted capabilities to help write code, explore data, and build models.
    Downloads: 6 This Week
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