Open Source Protocols

GeoWebCache is a WMS tile cache that lets you serve cached map data to WMS clients, Goole Earth, Google Maps and MS Virtual Earth. The system is pluggable on both ends and does automatic matching to the best available tile. It is very fast and scalable.

Run Maxima programs via the web in batch mode. Maxima is a Computer Algebra System written in Lisp.

The article explains the design and the characteristics of a new open source content aggregation system. Among the features of the program, stands out a new processing engine of syndication channels, monitoring capability of information recovery in real time, the possibilities of the configuration of aggregator behavior, automatic classification of contents and new models for representation of information from relational interactive maps. On the other hand, the aggregation program, which named AXYZ, is designed to manage thousands of syndication channels of RSS format. Furthermore it also provides statistics that can be used to study the production of any producer subject and the impact of the information that published in other sources. The result that has been obtained in the research, allow to create modules capable of compare the relationship between different news or information from different sources, their degree of influence and their detection by the patterns.

Aparicio delivers accessible, AJAX-based web user interface (and example JEE/Servlets binding) to render and edit Semantic information. It allows users to easily create RDF data.

A traslator from BPEL4WS processes to YAWL workflows that works with translation patterns. It takes a BPEL document in input and creates a YAWL workflow that rapresents it.

BigBizViz is an open source visualization software which represents the social network between the German incorporated companies (“Deutschland AG”), the members of the German federal assembly (“Deutscher Bundestag”) and members of pressure groups

BioNotate is an open-source web-based tool for the collaborative and distributed annotation of biomedical text with entities and facts of interest.

The BioSchemas project develops XML schemas for the exchange of biological data e.g. through SOAP-based web services. It is a collaborative and open project intended to increase the interoperability between bioinformatics applications.

Decision support tool that assesses breast cancer risk and identifies risk-reducing interventions. Includes web service implementations of established models -- BRCAPRO, Gail, Claus, BCSC Density -- for calculating breast cancer risk.

PySCeS CBMPy is a new platform for constraint based modelling and analysis. It has been designed using principles developed in the PySCeS simulation software project: usability, flexibility and accessibility. CBMPy supports the latest standards for encoding CBM models encoding, SBML L3 FBC, COBRA as well as MIRIAM compliant RDF and custom annotations. Its architecture is both extensible and flexible using data structures that are intuitive to the biologist while transparently translating these into the underlying mathematical structures. . CBMPy implements popular analyses such as FBA, FVA, element/charge balancing, network analysis and model editing as well as advanced methods developed for the ecosystem modelling. CBMPy supports user interaction via: - interactive console or as a library for advanced use - GUI, visual representation of the model, analysis methods - a SOAP based webAPI exposes high level functionality via web services

CUAHSI WaterObjectFlow provide JSON web service for hydrology observation data,sponsored by National Science Foundation of United States,developed by Joe hu, MapWindow software lab,Idaho State University

A PHP webapp to upload taxonomic checklists as Excel or CSV files to be served as TDWG TCS XML/RDF. It can handle multiple checklists, has a Tapir light webservice and a taxonomic tree of species names created from taxonomy in a checklist can be browsed.

The Citizen Privacy Service is an asynchronous component using artificial intelligence capabilities including DL decidability and first order logic provenance that provide policy decision and policy enforcement points based on the US Privacy Act of 1974.

ClinicWeb is a complete Health Information System (EHR - Electronic Health Medical Record); it access MySQL Database over Internet or local network; developed in Java - © 2008 - UNIFESP / Paulo Salomao, Amilton Martha, Carlos J R Campos, Daniel Sigulem

A software to store, (PUT) meteorological data from complex free form text format to databases and and GET stored (and already loaded) data from databases using OPeNDAP protocol. Written using Java6, XSD, and C++. It support OPeNDAP clients thanks to

A consumer API that can process the response of an ontology evaluation web service provider.

Web Service layer for the EPICS Control System.

EdgeExpressDB (eeDB) is a federated data abstraction system designed for integrating, interpreting, and visualizing very large biology datasets. It is designed for scaling beyond Petabytes and 10^13 objects. http://fantom.gsc.riken.jp/4/edgeexpress

Eirik is a tool for exploring large data sets, by using statistical analyses and multiple linked visualizations for data reduction. It relies on R, QT4 and OpenGL. Developed as part of AstroGrid/VOTech, Eirik uses Ice and xmlrpc for distributed computing.

EDAS2 is a web-based environmental quality data management and decision support framework

GeoJazzy WMSTileCache is a JEE WMS Tile Cache Web service. It optimizes and decreases the WMS request response between a WMS Server like mapserver and some Web clients like Openlayers or UDIG.

GeoSharp is a C# library that can read and process GeoRSS feeds.

The objective of this project is to make available an open-source of a gridified version of the Multifactor Dimensionality Reduction (MDR) software (http://www.epistasis.org/software.html).

Use this suite of Application Programming Interface (API) platforms to share web content across multiple channels. Mobile and tablet applications, widgets, and web pages may use the APIs to deliver and update content. The APIs allow content reuse and reduce development costs and product time-to-market. The APIs are available as .NET or Java instances. For more information, see the ReadMe.txt file in the downloadable zip archive. The Centers for Disease Control and Prevention (CDC) and the Department of Health and Human Services (HHS) Assistant Secretary for Public Affairs office (ASPA) developed these APIs in collaboration with the Food and Drug Administration’s (FDA) Center for Tobacco Products (CTP). The CDC, FDA/CTP, HHS/ASPA, and the National Institute of Health’s National Institute for Allergy and Infectious Diseases (NIH/NIAID) use these platforms. https://syndication.hhs.gov http://tools.cdc.gov http://tools.niaid.nih.gov http://tools.fda.gov

Based on HL7 v.2.3.1 Orders & Results Reference Information Model (RIM)s, The project is NOT a CPOE per-se. Instead, the project provides "applications" that allow EHR's to perform Outpatient Orders and Results via HIE, and collect these into their EHRs to feed the EHR "CPOE module / section" (ex. with prescribed drugs, ordered labs and results, ....) The first module in the project was the "ePrescribing application"; certified by RxHub and SureScripts back in 2007. New implementation needs to "re-certify" with SureScripts (which should not be much of a problem) Work on eLabs (using ELINCS, LOINC etc.) is being considered as participants join the project become available. The HL7 RIM allows for eImaging applications, eConsults applications, eReferrals applications, etc. Applications work independently, but through HIE, results come back to the provider to see it in its "CPOE Section or Module" Requires licensing of the MediSpan Drug Database for ePrescrib