Bioconductor Code: crisprScore

Graph of crisprScore

0e5cd77 (HEAD -> devel, origin/devel, origin/HEAD) Should pass check by Jean-Philippe Fortin <[email protected]> 2025-07-09 20:10:44 +0200;
a3c7304 Merge branch 'devel' into fixBasilisk by Jean-Philippe Fortin <[email protected]> 2025-06-20 16:20:52 +0200;
06ce8a0 Merge pull request <a href="#21">#21</a> from mzhibo/devel by Jean-Philippe Fortin <[email protected]> 2025-06-20 16:19:41 +0200;
cd111c7 Removed activateenv by Jean-Philippe Fortin <[email protected]> 2025-06-20 16:11:05 +0200;
1cdd97a Update crisprScore.Rmd by mzhibo <[email protected]> 2025-04-24 13:26:17 -0700;
d255647 Update basilisk.R on conda channel priority for RuleSet3 env setup by mzhibo <[email protected]> 2025-04-24 12:34:11 -0700;
9ee7679 Update basilisk.R on conda channel priority for azimuth env setup by mzhibo <[email protected]> 2025-04-24 11:55:55 -0700;
0f6e423 bump x.y.z version to odd y following creation of RELEASE_3_21 branch by A Wokaty <[email protected]> 2025-04-15 12:44:21 -0400;
d0373b5 (origin/RELEASE_3_21, RELEASE_3_21) bump x.y.z version to even y prior to creation of RELEASE_3_21 branch by A Wokaty <[email protected]> 2025-04-15 12:44:21 -0400;
d409224 (origin/master) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <[email protected]> 2024-10-29 11:07:33 -0400;
d3759b5 (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <[email protected]> 2024-10-29 11:07:33 -0400;
d1a68f6 Fixed doc for enPamGb and DeepCpf1 by Jean-Philippe Fortin <[email protected]> 2024-10-03 18:24:36 -0700;
bff592f Finished conda changes by Jean-Philippe Fortin <[email protected]> 2024-07-28 16:11:20 -0700;
c717a63 Updated readme by Jean-Philippe Fortin <[email protected]> 2024-07-25 13:12:48 -0700;
818ab73 All envs now running by Jean-Philippe Fortin <[email protected]> 2024-07-25 11:11:42 -0700;
becdae7 Fixed envs for Mac by Jean-Philippe Fortin <[email protected]> 2024-07-18 15:42:16 -0700;
5d52cdb bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <[email protected]> 2024-04-30 11:39:45 -0400;
af3634d (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <[email protected]> 2024-04-30 11:39:45 -0400;
a6dba86 Removed anaconda by Jean-Philippe Fortin <[email protected]> 2024-03-20 09:36:21 -0700;
4e9d45f Fixed python binaries by Jean-Philippe Fortin <[email protected]> 2024-01-16 11:09:00 -0800;
3c0e9de Addl scores fixed now by Jean-Philippe Fortin <[email protected]> 2024-01-16 11:08:07 -0800;
5c110e5 Changed to binaries call by Jean-Philippe Fortin <[email protected]> 2024-01-16 09:47:09 -0800;
03fe4bc bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <[email protected]> 2023-10-24 11:38:59 -0400;
d5de542 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <[email protected]> 2023-10-24 11:38:59 -0400;
595d9a8 Fixed version by Jean-Philippe Fortin <[email protected]> 2023-10-04 13:13:23 -0700;
d35cc38 Fixed python 2 envs by Jean-Philippe Fortin <[email protected]> 2023-10-04 13:11:08 -0700;
53246e5 Getting the correct python binaries for py2 by Jean-Philippe Fortin <[email protected]> 2023-10-04 10:16:59 -0700;
b3a100b bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <[email protected]> 2023-04-25 11:35:22 -0400;
4866933 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <[email protected]> 2023-04-25 11:35:22 -0400;
0bef9c4 Fixed unit testing by Jean-Philippe Fortin <[email protected]> 2023-04-10 09:45:08 -0700;
c889879 Fixed MIT scoring by Jean-Philippe Fortin <[email protected]> 2023-04-07 12:57:12 -0700;
5ecff5c Updated readme by Jean-Philippe Fortin <[email protected]> 2023-04-03 09:06:12 -0700;
c2229cb Fixed MIT formula by Jean-Philippe Fortin <[email protected]> 2023-04-03 08:51:04 -0700;
33f2066 Updated citation file by Jean-Philippe Fortin <[email protected]> 2023-02-28 07:42:37 -0800;
29221cf Updated citation by Jean-Philippe Fortin <[email protected]> 2023-02-28 07:42:18 -0800;
17653eb bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <[email protected]> 2022-11-01 11:26:17 -0400;
eae9018 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <[email protected]> 2022-11-01 11:26:17 -0400;
652002e Updated vignette by Jean-Philippe Fortin <[email protected]> 2022-10-17 12:08:30 -0700;
32a6a06 Documented crisprai objects by Jean-Philippe Fortin <[email protected]> 2022-10-12 09:40:22 -0700;
e5b9bfa Updated readmes by Jean-Philippe Fortin <[email protected]> 2022-08-30 20:47:13 -0700;
18a5a94 Updated version by Jean-Philippe Fortin <[email protected]> 2022-08-30 09:07:19 -0700;
373e828 Added doc link by Jean-Philippe Fortin <[email protected]> 2022-08-27 08:45:08 -0700;
49e464b Making sure it by Jean-Philippe Fortin <[email protected]> 2022-08-26 14:30:15 -0700;
e894d63 Updated vignette by Jean-Philippe Fortin <[email protected]> 2022-08-24 11:56:27 -0700;
d5064f8 Updated vignettes by Jean-Philippe Fortin <[email protected]> 2022-08-11 11:26:32 -0700;
d910afb Changed url by Jean-Philippe Fortin <[email protected]> 2022-08-11 09:59:25 -0700;
ae70f1a Removed path from install in deepspcas9 by fortinj2 <[email protected]> 2022-07-28 19:38:16 -0700;
72d1375 Merge all branches by fortinj2 <[email protected]> 2022-07-24 10:28:43 -0700;
5f66469 Merge branch 'fixCrispraiPy2' into main by fortinj2 <[email protected]> 2022-07-24 10:25:20 -0700;
bc2d8cb Added getWeissmanScores.py by fortinj2 <[email protected]> 2022-07-24 10:24:44 -0700;
97eb7fb Merge branch 'main' of github.com:Jfortin1/crisprScore into main by fortinj2 <[email protected]> 2022-07-24 10:02:49 -0700;
d6805df CasRx fixed for good by fortinj2 <[email protected]> 2022-07-23 08:27:54 -0700;
d10da24 Fixed getCasRxRFScores by fortinj2 <[email protected]> 2022-07-23 08:22:41 -0700;
7bd74fc Added isntrution by fortinj2 <[email protected]> 2022-07-22 11:31:05 -0700;
739d5e1 Added RNAhub by fortinj2 <[email protected]> 2022-07-22 11:24:45 -0700;
068bb45 Installed note by fortinj2 <[email protected]> 2022-07-22 08:47:00 -0700;
65f1509 Updated doc by fortinj2 <[email protected]> 2022-07-22 08:43:22 -0700;
4af68d2 Changed system to system2 by fortinj2 <[email protected]> 2022-07-19 14:53:01 -0700;
1de382d Added citation by fortinj2 <[email protected]> 2022-07-19 14:23:44 -0700;
c4b9569 Correct versions of basilisk by fortinj2 <[email protected]> 2022-07-18 12:46:07 -0700;
8ba6b30 Changed to exported obtainEnvironmentPath by fortinj2 <[email protected]> 2022-07-18 12:37:21 -0700;
cd21fe7 Fixed crisprater by fortinj2 <[email protected]> 2022-07-16 18:50:38 -0700;
f223cb9 Fixed CRISPRater by fortinj2 <[email protected]> 2022-07-16 18:07:33 -0700;
873d875 Updated mds by fortinj2 <[email protected]> 2022-07-01 14:59:08 -0700;
7531c6c Updated readme by fortinj2 <[email protected]> 2022-07-01 14:45:34 -0700;
3b82b91 Updating readme by fortinj2 <[email protected]> 2022-07-01 14:43:15 -0700;
be5c6a9 Added RuleSet3 sequence by fortinj2 <[email protected]> 2022-06-30 16:43:19 -0700;
c42580c Updating basilisk by fortinj2 <[email protected]> 2022-06-30 14:57:16 -0700;
611adb1 Updated vignette by fortinj2 <[email protected]> 2022-06-29 14:25:14 -0700;
a000244 Bumping version up by fortinj2 <[email protected]> 2022-06-29 14:10:18 -0700;
33d4910 Readu to merge by fortinj2 <[email protected]> 2022-06-29 14:08:58 -0700;
3806265 Adding DeepSpCas9 by fortinj2 <[email protected]> 2022-06-29 12:54:33 -0700;
119c602 Updated manual by fortinj2 <[email protected]> 2022-06-29 10:07:49 -0700;
60114a2 Updated doc, and added crisprRater by fortinj2 <[email protected]> 2022-06-24 12:08:17 -0700;
0226596 Started integrating crisprRater by fortinj2 <[email protected]> 2022-06-22 14:34:48 -0700;
214cb88 Py2 scoring algorithms fixed by fortinj2 <[email protected]> 2022-06-22 16:58:51 -0700;
c5f26d5 Fixed CRISPrai since py2 not supported by reticulate by fortinj2 <[email protected]> 2022-07-24 10:01:49 -0700;
14fbbd0 CasRx fixed for good by fortinj2 <[email protected]> 2022-07-23 08:27:54 -0700;
852179e Fixed getCasRxRFScores by fortinj2 <[email protected]> 2022-07-23 08:22:41 -0700;
d472238 Added isntrution by fortinj2 <[email protected]> 2022-07-22 11:31:05 -0700;
6975b9f Added RNAhub by fortinj2 <[email protected]> 2022-07-22 11:24:45 -0700;
ed7799d Installed note by fortinj2 <[email protected]> 2022-07-22 08:47:00 -0700;
226ca98 Updated doc by fortinj2 <[email protected]> 2022-07-22 08:43:22 -0700;
7414079 Changed system to system2 by fortinj2 <[email protected]> 2022-07-19 14:53:01 -0700;
74c414e Added citation by fortinj2 <[email protected]> 2022-07-19 14:23:44 -0700;
1ae49c3 Correct versions of basilisk by fortinj2 <[email protected]> 2022-07-18 12:46:07 -0700;
5d5d877 Changed to exported obtainEnvironmentPath by fortinj2 <[email protected]> 2022-07-18 12:37:21 -0700;
f9ba93a Fixed crisprater by fortinj2 <[email protected]> 2022-07-16 18:50:38 -0700;
3cfbd30 Fixed CRISPRater by fortinj2 <[email protected]> 2022-07-16 18:07:33 -0700;
6b78827 Updated mds by fortinj2 <[email protected]> 2022-07-01 14:59:08 -0700;
2652e8a Updated readme by fortinj2 <[email protected]> 2022-07-01 14:45:34 -0700;
60a90db Updating readme by fortinj2 <[email protected]> 2022-07-01 14:43:15 -0700;
ccedbb0 Added RuleSet3 sequence by fortinj2 <[email protected]> 2022-06-30 16:43:19 -0700;
e227c4b Updating basilisk by fortinj2 <[email protected]> 2022-06-30 14:57:16 -0700;
0e4d3fc Updated vignette by fortinj2 <[email protected]> 2022-06-29 14:25:14 -0700;
3c51985 Bumping version up by fortinj2 <[email protected]> 2022-06-29 14:10:18 -0700;
bcfa401 Readu to merge by fortinj2 <[email protected]> 2022-06-29 14:08:58 -0700;
c325cb3 Adding DeepSpCas9 by fortinj2 <[email protected]> 2022-06-29 12:54:33 -0700;
8b60ef3 Updated manual by fortinj2 <[email protected]> 2022-06-29 10:07:49 -0700;
6f2475d Updated doc, and added crisprRater by fortinj2 <[email protected]> 2022-06-24 12:08:17 -0700;